Docetaxel (Trihydrate)_RKO Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Docetaxel (Trihydrate) perturbation in RKO cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Docetaxel (Trihydrate)_RKO drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
NUP58 nucleoporin 58 0.0262543
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0208059
ZNF292 zinc finger protein 292 0.0202423
NCKAP1 NCK-associated protein 1 0.0200536
KDM3A lysine (K)-specific demethylase 3A 0.0182149
NAMPT nicotinamide phosphoribosyltransferase 0.0178492
KDM6A lysine (K)-specific demethylase 6A 0.0157515
SPAG9 sperm associated antigen 9 0.0152228
GARS1 glycyl-tRNA synthetase 1 0.0151392
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.014402
ADAM17 ADAM metallopeptidase domain 17 0.0143976
RPL3 ribosomal protein L3 0.0143907
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.014182
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0139713
BTAF1 BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa 0.0136453
KIF5B kinesin family member 5B 0.013618
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0134802
CCNL1 cyclin L1 0.0131172
TRA2A transformer 2 alpha homolog (Drosophila) 0.0130346
RLF rearranged L-myc fusion 0.0129952
CHD1 chromodomain helicase DNA binding protein 1 0.0128657
TPX2 TPX2, microtubule-associated 0.0127811
CAMTA1 calmodulin binding transcription activator 1 0.0127435
NEK7 NIMA-related kinase 7 0.0126116
USP9X ubiquitin specific peptidase 9, X-linked 0.0124924
OGA O-GlcNAcase 0.0124731
ADAM9 ADAM metallopeptidase domain 9 0.0123721
ELF2 E74-like factor 2 (ets domain transcription factor) 0.0123379
KMT2C lysine (K)-specific methyltransferase 2C 0.0123214
KMT2E lysine (K)-specific methyltransferase 2E 0.0119854
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b 0.0119569
RBM33 RNA binding motif protein 33 0.0118212
HELZ helicase with zinc finger 0.011802
UBXN7 UBX domain protein 7 0.0116198
HDAC3 histone deacetylase 3 0.0116024
FOXJ3 forkhead box J3 0.0115007
PNISR PNN-interacting serine/arginine-rich protein 0.0114865
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0113709
DHX15 DEAH (Asp-Glu-Ala-His) box helicase 15 0.011266
YTHDC1 YTH domain containing 1 0.0112136
POU2F1 POU class 2 homeobox 1 0.0111715
ZFC3H1 zinc finger, C3H1-type containing 0.0110126
ZNF654 zinc finger protein 654 0.0110071
EIF4B eukaryotic translation initiation factor 4B 0.010907
FXR1 fragile X mental retardation, autosomal homolog 1 0.010858
SUCO SUN domain containing ossification factor 0.0107095
RNF145 ring finger protein 145 0.0106722
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0106379
KAT6A K(lysine) acetyltransferase 6A 0.0106237
ZFAND3 zinc finger, AN1-type domain 3 0.0104577
CTDSPL2 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2 0.0103917
CAPZA2 capping protein (actin filament) muscle Z-line, alpha 2 0.0101251
TIGAR TP53 induced glycolysis regulatory phosphatase 0.0101055
NUP54 nucleoporin 54kDa 0.00996996
YME1L1 YME1-like 1 ATPase 0.00991639
RAB18 RAB18, member RAS oncogene family 0.00988083
FAR1 fatty acyl CoA reductase 1 0.00979652
SREK1 splicing regulatory glutamine/lysine-rich protein 1 0.00977131
SEC63 SEC63 homolog (S. cerevisiae) 0.00969711
PHIP pleckstrin homology domain interacting protein 0.00949772
USP3 ubiquitin specific peptidase 3 0.00943956
CASC3 cancer susceptibility candidate 3 0.00943104
EGLN1 egl-9 family hypoxia-inducible factor 1 0.00939296
RIOK3 RIO kinase 3 0.00932223
NAA35 N(alpha)-acetyltransferase 35, NatC auxiliary subunit 0.00932126
RAB8B RAB8B, member RAS oncogene family 0.0092744
MEF2A myocyte enhancer factor 2A 0.00927226
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.00921826
FOXO3 forkhead box O3 0.00912511
PCBP2 poly(rC) binding protein 2 0.00911987
UBA6 ubiquitin-like modifier activating enzyme 6 0.00905305
RYBP RING1 and YY1 binding protein 0.00905153
ATP11B ATPase, class VI, type 11B 0.00903386
LCORL ligand dependent nuclear receptor corepressor-like 0.00897952
TFG TRK-fused gene 0.00893093
ANLN anillin, actin binding protein 0.00888707
RAD21 RAD21 homolog (S. pombe) 0.0088282
ACTR3 ARP3 actin-related protein 3 homolog (yeast) 0.00879228
SPTBN1 spectrin, beta, non-erythrocytic 1 0.00874595
EPB41L2 erythrocyte membrane protein band 4.1-like 2 0.00869773
ABI1 abl-interactor 1 0.00866228
IFRD1 interferon-related developmental regulator 1 0.00853547
ARHGAP11A Rho GTPase activating protein 11A 0.00853152
CNOT4 CCR4-NOT transcription complex, subunit 4 0.00839699
EIF5 eukaryotic translation initiation factor 5 0.00830539
MTF2 metal response element binding transcription factor 2 0.00828253
OSBPL9 oxysterol binding protein-like 9 0.00821939
ATP13A3 ATPase type 13A3 0.0081939
CKAP5 cytoskeleton associated protein 5 0.00818283
MIER1 mesoderm induction early response 1, transcriptional regulator 0.00812747
PUM2 pumilio RNA-binding family member 2 0.00804877
EPS8 epidermal growth factor receptor pathway substrate 8 0.00803092
PSME4 proteasome (prosome, macropain) activator subunit 4 0.00797867
PPP1CB protein phosphatase 1, catalytic subunit, beta isozyme 0.00796919
ZMYM2 zinc finger, MYM-type 2 0.00795482
MXD1 MAX dimerization protein 1 0.00787545
MTMR3 myotubularin related protein 3 0.007861
ZNF451 zinc finger protein 451 0.00783595
REL v-rel avian reticuloendotheliosis viral oncogene homolog 0.00780831
SRRM1 serine/arginine repetitive matrix 1 0.00779698

decreased expression

Symbol Name Standardized Value
DLC1 DLC1 Rho GTPase activating protein -0.172707
MT2A metallothionein 2A -0.147577
NAV3 neuron navigator 3 -0.125075
ZNF438 zinc finger protein 438 -0.120586
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.118034
FRMD4A FERM domain containing 4A -0.11102
FLNB filamin B, beta -0.10542
ARHGAP22 Rho GTPase activating protein 22 -0.101578
FRMD6 FERM domain containing 6 -0.0818294
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0788114
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0728848
PBX3 pre-B-cell leukemia homeobox 3 -0.0720817
IFI16 interferon, gamma-inducible protein 16 -0.0715157
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.062256
RPS6 ribosomal protein S6 -0.061267
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0607686
HMGA2 high mobility group AT-hook 2 -0.0602055
LAMB3 laminin, beta 3 -0.0601786
ACTG1 actin gamma 1 -0.0596035
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0582941
BNC2 basonuclin 2 -0.0570506
EXT1 exostosin glycosyltransferase 1 -0.0548219
HDAC9 histone deacetylase 9 -0.0540013
MAPKAP1 mitogen-activated protein kinase associated protein 1 -0.0535431
C2CD2 C2 calcium-dependent domain containing 2 -0.0497578
TPT1 tumor protein, translationally-controlled 1 -0.0485524
RPL35A ribosomal protein L35a -0.0472443
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0469003
FTL ferritin, light polypeptide -0.0466856
NAV2 neuron navigator 2 -0.0461053
ELL2 elongation factor, RNA polymerase II, 2 -0.0458938
TPM4 tropomyosin 4 -0.0457217
LPP LIM domain containing preferred translocation partner in lipoma -0.044941
RPS8 ribosomal protein S8 -0.0448975
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type -0.0440625
RPLP1 ribosomal protein, large, P1 -0.0431007
DGKI diacylglycerol kinase, iota -0.0414722
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 -0.041336
SLC38A2 solute carrier family 38, member 2 -0.0410592
STC1 stanniocalcin 1 -0.040997
ALCAM activated leukocyte cell adhesion molecule -0.0405186
ANTXR2 anthrax toxin receptor 2 -0.0403299
TTR transthyretin -0.0394247
RPL12 ribosomal protein L12 -0.0392226
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 -0.0390893
SSR3 signal sequence receptor, gamma (translocon-associated protein gamma) -0.0388114
PHC2 polyhomeotic homolog 2 (Drosophila) -0.0387104
RPL7A ribosomal protein L7a -0.0386601
NABP1 nucleic acid binding protein 1 -0.0380488
SUPT3H suppressor of Ty 3 homolog (S. cerevisiae) -0.0374228
HMGA1 high mobility group AT-hook 1 -0.0373953
TMSB10 thymosin beta 10 -0.0372613
RAD51B RAD51 paralog B -0.0372497
RPL8 ribosomal protein L8 -0.0372009
EFNB2 ephrin-B2 -0.0362504
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0343048
RPS3 ribosomal protein S3 -0.0340009
ERC1 ELKS/RAB6-interacting/CAST family member 1 -0.0339049
RPLP0 ribosomal protein, large, P0 -0.0334915
ASPH aspartate beta-hydroxylase -0.0331844
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.0322633
CALD1 caldesmon 1 -0.0320442
RPL37A ribosomal protein L37a -0.0319688
FHIT fragile histidine triad -0.0318256
TM4SF1 transmembrane 4 L six family member 1 -0.0314455
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0314048
DDAH1 dimethylarginine dimethylaminohydrolase 1 -0.0303248
MTAP methylthioadenosine phosphorylase -0.030212
IQCJ-SCHIP1 IQCJ-SCHIP1 readthrough -0.0301671
LDHA lactate dehydrogenase A -0.0298797
RPS19 ribosomal protein S19 -0.0298177
RPL26 ribosomal protein L26 -0.0298165
SMYD3 SET and MYND domain containing 3 -0.0297727
RPL30 ribosomal protein L30 -0.0297578
SP100 SP100 nuclear antigen -0.0296164
ENO1 enolase 1, (alpha) -0.0293248
ZEB1 zinc finger E-box binding homeobox 1 -0.0292145
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0290918
RPL9 ribosomal protein L9 -0.0289614
RPL7 ribosomal protein L7 -0.028537
NAP1L1 nucleosome assembly protein 1-like 1 -0.0279022
ANKIB1 ankyrin repeat and IBR domain containing 1 -0.027616
PGK1 phosphoglycerate kinase 1 -0.0275479
KRR1 KRR1, small subunit (SSU) processome component, homolog (yeast) -0.0274066
KPNB1 karyopherin (importin) beta 1 -0.0273985
ZBTB20 zinc finger and BTB domain containing 20 -0.0273742
RPS12 ribosomal protein S12 -0.0272743
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0267892
RAB7A RAB7A, member RAS oncogene family -0.0263132
RRBP1 ribosome binding protein 1 -0.0262682
JMJD1C jumonji domain containing 1C -0.0262491
AGO2 argonaute RISC catalytic component 2 -0.0261855
ARHGEF28 Rho guanine nucleotide exchange factor (GEF) 28 -0.0260875
PRRC2B proline-rich coiled-coil 2B -0.0260663
SIPA1L1 signal-induced proliferation-associated 1 like 1 -0.0260151
RPS29 ribosomal protein S29 -0.025449
RPS24 ribosomal protein S24 -0.0253493
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0251726
MACF1 microtubule-actin crosslinking factor 1 -0.0250064
FEZ2 fasciculation and elongation protein zeta 2 (zygin II) -0.0249635