Docetaxel (Trihydrate)_SK-MEL-2 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Docetaxel (Trihydrate) perturbation in SK-MEL-2 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Docetaxel (Trihydrate)_SK-MEL-2 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
RPS12 ribosomal protein S12 0.0512338
RPS3 ribosomal protein S3 0.0469049
FTL ferritin, light polypeptide 0.0465312
RPS6 ribosomal protein S6 0.0439373
RPLP2 ribosomal protein, large, P2 0.0406433
IGFBP3 insulin-like growth factor binding protein 3 0.0403542
FN1 fibronectin 1 0.0380542
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0346773
RPL37A ribosomal protein L37a 0.0336723
RPL38 ribosomal protein L38 0.0331642
RPL32 ribosomal protein L32 0.0293138
RPL12 ribosomal protein L12 0.0281428
RPS17 ribosomal protein S17 0.0262545
TPT1 tumor protein, translationally-controlled 1 0.025593
RPL11 ribosomal protein L11 0.0255221
RPL7A ribosomal protein L7a 0.0199408
RPL27 ribosomal protein L27 0.0186052
SREBF2 sterol regulatory element binding transcription factor 2 0.0182939
RPL5 ribosomal protein L5 0.0179935
MKI67 marker of proliferation Ki-67 0.0178894
RPL35 ribosomal protein L35 0.0175353
RPS27 ribosomal protein S27 0.0174333
RPS14 ribosomal protein S14 0.017234
RPL37 ribosomal protein L37 0.0172279
RPL31 ribosomal protein L31 0.016992
RPS2 ribosomal protein S2 0.0168091
RAB13 RAB13, member RAS oncogene family 0.0163403
EIF1 eukaryotic translation initiation factor 1 0.0163273
RPL13A ribosomal protein L13a 0.0160155
RPS25 ribosomal protein S25 0.0158091
HILPDA hypoxia inducible lipid droplet-associated 0.0148546
BHLHE40 basic helix-loop-helix family, member e40 0.0147241
RPS19 ribosomal protein S19 0.0143342
SLC25A5 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5 0.014026
AKAP12 A kinase (PRKA) anchor protein 12 0.0138164
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.013813
RPL36 ribosomal protein L36 0.0136048
RPS10 ribosomal protein S10 0.0135943
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0132862
MXI1 MAX interactor 1, dimerization protein 0.0131088
PSMA7 proteasome (prosome, macropain) subunit, alpha type, 7 0.0130546
S100A9 S100 calcium binding protein A9 0.0128576
RPS8 ribosomal protein S8 0.0128481
FAM13A family with sequence similarity 13, member A 0.0123592
IMPDH2 IMP (inosine 5'-monophosphate) dehydrogenase 2 0.0122669
GNL3 guanine nucleotide binding protein-like 3 (nucleolar) 0.0122444
TENM1 teneurin transmembrane protein 1 0.0121841
RPS23 ribosomal protein S23 0.0117451
DCAF5 DDB1 and CUL4 associated factor 5 0.0117396
RPL35A ribosomal protein L35a 0.0117102
HDGF hepatoma-derived growth factor 0.0116323
RPS16 ribosomal protein S16 0.0115586
ANP32B acidic (leucine-rich) nuclear phosphoprotein 32 family, member B 0.0115002
EEA1 early endosome antigen 1 0.0114878
ARHGAP21 Rho GTPase activating protein 21 0.0114594
AP1S2 adaptor-related protein complex 1, sigma 2 subunit 0.0113519
GCC2 GRIP and coiled-coil domain containing 2 0.0113125
KMT2C lysine (K)-specific methyltransferase 2C 0.0112311
RPL19 ribosomal protein L19 0.011166
WSB1 WD repeat and SOCS box containing 1 0.0111296
NME2 NME/NM23 nucleoside diphosphate kinase 2 0.0109726
RACK1 receptor for activated C kinase 1 0.0108553
EGLN1 egl-9 family hypoxia-inducible factor 1 0.0106799
PPP1R3B protein phosphatase 1, regulatory subunit 3B 0.0106177
LGALS1 lectin, galactoside-binding, soluble, 1 0.0105589
RPL26 ribosomal protein L26 0.0104138
CAPRIN1 cell cycle associated protein 1 0.010077
RPS15 ribosomal protein S15 0.00990096
FAM117B family with sequence similarity 117, member B 0.00986443
UQCRQ ubiquinol-cytochrome c reductase, complex III subunit VII, 9.5kDa 0.00980412
UBXN7 UBX domain protein 7 0.00976532
GARS1 glycyl-tRNA synthetase 1 0.00961066
PRELID1 PRELI domain containing 1 0.0096008
PDAP1 PDGFA associated protein 1 0.00941646
SERF2 small EDRK-rich factor 2 0.00937789
UBA52 ubiquitin A-52 residue ribosomal protein fusion product 1 0.00937677
UPP1 uridine phosphorylase 1 0.00930182
RPS24 ribosomal protein S24 0.00925341
ARHGEF11 Rho guanine nucleotide exchange factor (GEF) 11 0.00924601
KAZN kazrin, periplakin interacting protein 0.00907815
CYP51A1 cytochrome P450, family 51, subfamily A, polypeptide 1 0.009047
RPL27A ribosomal protein L27a 0.00900129
NOL7 nucleolar protein 7, 27kDa 0.00892241
MLEC malectin 0.00882998
FAM162A family with sequence similarity 162, member A 0.00882364
NIFK nucleolar protein interacting with the FHA domain of MKI67 0.00860592
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.00854785
LEF1 lymphoid enhancer-binding factor 1 0.0084047
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.00838184
RPL34 ribosomal protein L34 0.00836019
RSL24D1 ribosomal L24 domain containing 1 0.00832428
EIF3I eukaryotic translation initiation factor 3, subunit I 0.00823159
SRP14 signal recognition particle 14kDa (homologous Alu RNA binding protein) 0.00814792
GNAI2 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2 0.00806243
RPLP0 ribosomal protein, large, P0 0.00805675
PRC1 protein regulator of cytokinesis 1 0.008049
H2AZ1 H2A.Z variant histone 1 0.00798422
RPS11 ribosomal protein S11 0.0078945
TMEM45A transmembrane protein 45A 0.00788679
RPL17-C18ORF32 RPL17-C18orf32 readthrough 0.0078057

decreased expression

Symbol Name Standardized Value
VIM vimentin -0.185939
UBC ubiquitin C -0.100018
FMN1 formin 1 -0.0902815
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0838607
FNDC3B fibronectin type III domain containing 3B -0.0835616
ENO1 enolase 1, (alpha) -0.0768969
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0723244
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa -0.0717898
NRG3 neuregulin 3 -0.0681538
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.063434
POTEF POTE ankyrin domain family, member F -0.0586201
LDHA lactate dehydrogenase A -0.0585455
NLGN1 neuroligin 1 -0.0578512
PGK1 phosphoglycerate kinase 1 -0.0556857
PKM pyruvate kinase, muscle -0.0532556
PPFIA1 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 -0.0523984
PCBP2 poly(rC) binding protein 2 -0.0497579
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0489827
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0478221
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 -0.0474937
MT2A metallothionein 2A -0.0459269
NAV2 neuron navigator 2 -0.0450634
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0424225
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0417918
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 -0.0416792
CCND1 cyclin D1 -0.0411611
WWTR1 WW domain containing transcription regulator 1 -0.0404344
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0401865
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.039992
B2M beta-2-microglobulin -0.0398394
SERPINA3 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 -0.0396739
EMP1 epithelial membrane protein 1 -0.0386246
TXNRD1 thioredoxin reductase 1 -0.0384951
NOTCH2 notch 2 -0.0372883
SQSTM1 sequestosome 1 -0.0370264
ACTN4 actinin, alpha 4 -0.0360114
EEF2 eukaryotic translation elongation factor 2 -0.0346582
ANXA2 annexin A2 -0.0343265
RUNX1 runt-related transcription factor 1 -0.0342464
ATXN1 ataxin 1 -0.0340294
SIPA1L1 signal-induced proliferation-associated 1 like 1 -0.0339397
ANKRD28 ankyrin repeat domain 28 -0.0338881
AFF4 AF4/FMR2 family, member 4 -0.0332273
RAD51B RAD51 paralog B -0.0322241
AKT3 v-akt murine thymoma viral oncogene homolog 3 -0.0319949
TM4SF1 transmembrane 4 L six family member 1 -0.0318361
EP300 E1A binding protein p300 -0.0315986
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.0313742
AHNAK AHNAK nucleoprotein -0.0312972
SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 -0.0311859
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0311605
SLC39A11 solute carrier family 39, member 11 -0.0304208
MAGI3 membrane associated guanylate kinase, WW and PDZ domain containing 3 -0.0299949
MAP4 microtubule-associated protein 4 -0.0299636
CD44 CD44 molecule (Indian blood group) -0.0296719
PTPRG protein tyrosine phosphatase, receptor type, G -0.0296601
ZBTB20 zinc finger and BTB domain containing 20 -0.0289497
RERE arginine-glutamic acid dipeptide (RE) repeats -0.0283708
ALCAM activated leukocyte cell adhesion molecule -0.0281853
RASAL2 RAS protein activator like 2 -0.0280355
ZFAND3 zinc finger, AN1-type domain 3 -0.0277179
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0270093
MYH9 myosin, heavy chain 9, non-muscle -0.0269492
ANKRD1 ankyrin repeat domain 1 (cardiac muscle) -0.0269407
RHOA ras homolog family member A -0.0267413
MSN moesin -0.026737
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0266902
PUM1 pumilio RNA-binding family member 1 -0.0266511
FRMD4A FERM domain containing 4A -0.0266161
CANX calnexin -0.026563
VMP1 vacuole membrane protein 1 -0.0265025
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa -0.026433
TPM3 tropomyosin 3 -0.0263846
IFI16 interferon, gamma-inducible protein 16 -0.0263483
GALNT2 polypeptide N-acetylgalactosaminyltransferase 2 -0.0261988
DIAPH1 diaphanous-related formin 1 -0.0260522
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0259099
LAMP2 lysosomal-associated membrane protein 2 -0.0258969
SEPTIN7 septin 7 -0.0258088
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0255224
CLIC4 chloride intracellular channel 4 -0.0253947
ST13 suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) -0.0253503
RAPGEF6 Rap guanine nucleotide exchange factor (GEF) 6 -0.0253432
PTK2 protein tyrosine kinase 2 -0.0250226
PMEL premelanosome protein -0.0249199
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0249077
RTN4 reticulon 4 -0.0245985
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0244037
CSNK1A1 casein kinase 1, alpha 1 -0.0241328
DCAF7 DDB1 and CUL4 associated factor 7 -0.0241182
FRMD5 FERM domain containing 5 -0.0240234
FAM13B family with sequence similarity 13, member B -0.0238732
HLA-E major histocompatibility complex, class I, E -0.0238615
TRIO trio Rho guanine nucleotide exchange factor -0.0237147
SMYD3 SET and MYND domain containing 3 -0.0237069
CTTN cortactin -0.0236409
CMSS1 cms1 ribosomal small subunit homolog (yeast) -0.0233691
PUM2 pumilio RNA-binding family member 2 -0.0233662
CD59 CD59 molecule, complement regulatory protein -0.0233407
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0232913