Docetaxel (Trihydrate)_SNU-1 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Docetaxel (Trihydrate) perturbation in SNU-1 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Docetaxel (Trihydrate)_SNU-1 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
ZFAND3 zinc finger, AN1-type domain 3 0.0685745
RPL3 ribosomal protein L3 0.061097
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0580897
HDAC9 histone deacetylase 9 0.0533205
CCNL1 cyclin L1 0.0527975
SRRM2 serine/arginine repetitive matrix 2 0.050356
PCBP2 poly(rC) binding protein 2 0.0461322
EEF2 eukaryotic translation elongation factor 2 0.0458129
SAMD4A sterile alpha motif domain containing 4A 0.0429449
RTN4 reticulon 4 0.042733
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme 0.0423643
NUP58 nucleoporin 58 0.0405098
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0385185
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0379249
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0378995
ENOX1 ecto-NOX disulfide-thiol exchanger 1 0.0373576
ANKRD11 ankyrin repeat domain 11 0.0367864
UBC ubiquitin C 0.0361524
RPLP2 ribosomal protein, large, P2 0.0352461
ANP32B acidic (leucine-rich) nuclear phosphoprotein 32 family, member B 0.034774
RPL21 ribosomal protein L21 0.034409
RPL23 ribosomal protein L23 0.0325813
SESN2 sestrin 2 0.0323091
EIF5 eukaryotic translation initiation factor 5 0.0323005
RPS12 ribosomal protein S12 0.0315987
PNN pinin, desmosome associated protein 0.0315693
VMP1 vacuole membrane protein 1 0.0309383
ANK2 ankyrin 2, neuronal 0.0301572
ZNF292 zinc finger protein 292 0.0296134
RPS6 ribosomal protein S6 0.0291789
SFPQ splicing factor proline/glutamine-rich 0.0289708
WDR43 WD repeat domain 43 0.0285295
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0279464
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0273392
SREK1 splicing regulatory glutamine/lysine-rich protein 1 0.0270697
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0266652
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0263211
PLK2 polo-like kinase 2 0.0259292
TUBA1B tubulin, alpha 1b 0.0258115
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0253918
NCKAP1 NCK-associated protein 1 0.0253566
MEF2A myocyte enhancer factor 2A 0.0252799
ASCC3 activating signal cointegrator 1 complex subunit 3 0.0252011
JMJD1C jumonji domain containing 1C 0.0251417
HDGF hepatoma-derived growth factor 0.0248814
TRA2B transformer 2 beta homolog (Drosophila) 0.0247506
PRRC2C proline-rich coiled-coil 2C 0.0240034
BRD2 bromodomain containing 2 0.0239758
BCLAF1 BCL2-associated transcription factor 1 0.0236415
TUBB4B tubulin, beta 4B class IVb 0.0234246
KMT2E lysine (K)-specific methyltransferase 2E 0.0231597
PDE4D phosphodiesterase 4D, cAMP-specific 0.0229702
YAP1 Yes-associated protein 1 0.022647
ARGLU1 arginine and glutamate rich 1 0.0224929
VEGFA vascular endothelial growth factor A 0.0221533
MARS1 methionyl-tRNA synthetase 1 0.0220534
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0220222
KDM6A lysine (K)-specific demethylase 6A 0.0220017
RPS3A ribosomal protein S3A 0.0219976
ERRFI1 ERBB receptor feedback inhibitor 1 0.0217453
RBMS2 RNA binding motif, single stranded interacting protein 2 0.0216427
DIAPH3 diaphanous-related formin 3 0.0216208
PSMD14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 0.0215809
CASC3 cancer susceptibility candidate 3 0.0212992
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 0.0212288
NFE2L1 nuclear factor, erythroid 2-like 1 0.0211544
FAM168A family with sequence similarity 168, member A 0.0203334
RPS2 ribosomal protein S2 0.020219
TXNRD1 thioredoxin reductase 1 0.0202062
ITSN1 intersectin 1 (SH3 domain protein) 0.0201852
HNRNPDL heterogeneous nuclear ribonucleoprotein D-like 0.0201141
TOP2A topoisomerase (DNA) II alpha 170kDa 0.019942
RPS3 ribosomal protein S3 0.0198164
QKI QKI, KH domain containing, RNA binding 0.0196431
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b 0.0195013
SET SET nuclear proto-oncogene 0.0194344
PSAT1 phosphoserine aminotransferase 1 0.019279
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0192601
RPL37A ribosomal protein L37a 0.0190529
CALR calreticulin 0.01865
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0185694
SSBP2 single-stranded DNA binding protein 2 0.0184918
EZR ezrin 0.018437
SRSF1 serine/arginine-rich splicing factor 1 0.0184254
HNRNPM heterogeneous nuclear ribonucleoprotein M 0.0183864
CSNK1A1 casein kinase 1, alpha 1 0.0182742
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0182575
CRPPA CDP-L-ribitol pyrophosphorylase A 0.018133
TPM3 tropomyosin 3 0.0179734
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0179512
CSF1 colony stimulating factor 1 (macrophage) 0.0177108
KPNA4 karyopherin alpha 4 (importin alpha 3) 0.0174008
HNRNPH3 heterogeneous nuclear ribonucleoprotein H3 (2H9) 0.0173027
YTHDC1 YTH domain containing 1 0.0168909
PDGFC platelet derived growth factor C 0.0168069
APLP2 amyloid beta (A4) precursor-like protein 2 0.0167751
PAPOLA poly(A) polymerase alpha 0.0166708
SRSF11 serine/arginine-rich splicing factor 11 0.0165543
MED13L mediator complex subunit 13-like 0.0164952
DAPK3 death-associated protein kinase 3 0.016487

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.295548
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.227131
VCL vinculin -0.153542
LDHA lactate dehydrogenase A -0.115956
PKM pyruvate kinase, muscle -0.106755
AHNAK AHNAK nucleoprotein -0.106676
MINDY2 MINDY lysine 48 deubiquitinase 2 -0.102045
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0965894
NBEA neurobeachin -0.0891768
ACTG1 actin gamma 1 -0.0859479
TJP1 tight junction protein 1 -0.0831381
PTMA prothymosin, alpha -0.0828902
LOC112694756 uncharaterized LOC112694756 -0.0817829
CCND1 cyclin D1 -0.07773
ADAM10 ADAM metallopeptidase domain 10 -0.0772773
TPT1 tumor protein, translationally-controlled 1 -0.0772461
DLG1 discs, large homolog 1 (Drosophila) -0.0735796
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0723415
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0679903
ARL4C ADP-ribosylation factor-like 4C -0.067747
FOXP1 forkhead box P1 -0.0665935
EFNA5 ephrin-A5 -0.0640923
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 -0.0639861
GCNT1 glucosaminyl (N-acetyl) transferase 1, core 2 -0.0630757
TMSB4X thymosin beta 4, X-linked -0.0619786
PGK1 phosphoglycerate kinase 1 -0.0609709
NFIA nuclear factor I/A -0.0580874
RPL35A ribosomal protein L35a -0.0579908
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0560155
TMEM65 transmembrane protein 65 -0.0556846
NFE2L2 nuclear factor, erythroid 2-like 2 -0.0543386
NPAS2 neuronal PAS domain protein 2 -0.0541966
S100A6 S100 calcium binding protein A6 -0.0536907
HDLBP high density lipoprotein binding protein -0.053576
PYGB phosphorylase, glycogen; brain -0.0520085
BMP10 bone morphogenetic protein 10 -0.0517523
CACNB4 calcium channel, voltage-dependent, beta 4 subunit -0.051607
S100A4 S100 calcium binding protein A4 -0.0514251
GLI2 GLI family zinc finger 2 -0.0494568
CD47 CD47 molecule -0.0477228
EIF4A2 eukaryotic translation initiation factor 4A2 -0.0469672
RPLP1 ribosomal protein, large, P1 -0.0469042
ZBTB20 zinc finger and BTB domain containing 20 -0.0451409
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0442629
NF1 neurofibromin 1 -0.0439506
SQSTM1 sequestosome 1 -0.0431971
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0430339
EGFR epidermal growth factor receptor -0.0414756
CAMTA1 calmodulin binding transcription activator 1 -0.0408396
SOX6 SRY (sex determining region Y)-box 6 -0.0408355
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 -0.0403217
CYB5B cytochrome b5 type B (outer mitochondrial membrane) -0.0400768
KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 -0.0397429
ENOSF1 enolase superfamily member 1 -0.0393545
TTC3 tetratricopeptide repeat domain 3 -0.0390754
GNAS GNAS complex locus -0.0390084
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0373477
FLNB filamin B, beta -0.0365655
PRDX2 peroxiredoxin 2 -0.0363534
ZMYND8 zinc finger, MYND-type containing 8 -0.0360439
PRELID2 PRELI domain containing 2 -0.0354394
SMYD3 SET and MYND domain containing 3 -0.0350121
BMP2K BMP2 inducible kinase -0.0347457
CPED1 cadherin-like and PC-esterase domain containing 1 -0.034324
FHIT fragile histidine triad -0.0339951
RHOA ras homolog family member A -0.0336243
PRUNE2 prune homolog 2 (Drosophila) -0.0331567
RPLP0 ribosomal protein, large, P0 -0.0329773
ARFGEF2 ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) -0.0317398
SPRY4 sprouty homolog 4 (Drosophila) -0.0316919
ALDH3A2 aldehyde dehydrogenase 3 family, member A2 -0.0307886
PJA2 praja ring finger 2, E3 ubiquitin protein ligase -0.0307563
MYO5C myosin VC -0.0305853
CCDC68 coiled-coil domain containing 68 -0.0302675
AHI1 Abelson helper integration site 1 -0.0302664
ZNF608 zinc finger protein 608 -0.029902
VDAC1 voltage-dependent anion channel 1 -0.0297671
TGFBR3 transforming growth factor, beta receptor III -0.0296926
CAMK1D calcium/calmodulin-dependent protein kinase ID -0.0296825
RRBP1 ribosome binding protein 1 -0.0293789
TBC1D22A TBC1 domain family, member 22A -0.0291085
ALDOC aldolase C, fructose-bisphosphate -0.029088
FKBP10 FK506 binding protein 10, 65 kDa -0.0289954
MYO5A myosin VA (heavy chain 12, myoxin) -0.0286264
TAS2R14 taste receptor, type 2, member 14 -0.0285628
LMAN1 lectin, mannose-binding, 1 -0.028196
ENO1 enolase 1, (alpha) -0.0277222
RPS24 ribosomal protein S24 -0.0276628
S100A10 S100 calcium binding protein A10 -0.027047
MON2 MON2 homolog (S. cerevisiae) -0.0269575
METTL15 methyltransferase like 15 -0.0268361
RPL34 ribosomal protein L34 -0.0267536
SERPINB6 serpin peptidase inhibitor, clade B (ovalbumin), member 6 -0.0266885
NBAS neuroblastoma amplified sequence -0.0265907
ARHGEF10 Rho guanine nucleotide exchange factor (GEF) 10 -0.0264095
SHC1 SHC (Src homology 2 domain containing) transforming protein 1 -0.0262053
DGKH diacylglycerol kinase, eta -0.0256559
GNPDA1 glucosamine-6-phosphate deaminase 1 -0.0255442
IGF1R insulin-like growth factor 1 receptor -0.0250397
NQO1 NAD(P)H dehydrogenase, quinone 1 -0.0247488