Docetaxel (Trihydrate)_SNU-423 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Docetaxel (Trihydrate) perturbation in SNU-423 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Docetaxel (Trihydrate)_SNU-423 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
IGFN1 immunoglobulin-like and fibronectin type III domain containing 1 0.068896
MYH9 myosin, heavy chain 9, non-muscle 0.0432063
EEF2 eukaryotic translation elongation factor 2 0.0419258
RPL37A ribosomal protein L37a 0.0388622
RPS12 ribosomal protein S12 0.0374101
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0332636
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0321072
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0311444
RPL31 ribosomal protein L31 0.0293169
RPS3 ribosomal protein S3 0.0288456
RPLP2 ribosomal protein, large, P2 0.0286009
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0274355
KYNU kynureninase 0.0260901
RPS8 ribosomal protein S8 0.0252662
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0244517
MX1 MX dynamin-like GTPase 1 0.024205
RPS27A ribosomal protein S27a 0.0240429
RPS25 ribosomal protein S25 0.0238753
FLNA filamin A, alpha 0.022309
GOLGB1 golgin B1 0.0217834
RPS29 ribosomal protein S29 0.0214374
RPL38 ribosomal protein L38 0.020935
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0207358
INTS6 integrator complex subunit 6 0.0200893
DDX60L DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like 0.0187474
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.018571
CALR calreticulin 0.0183506
USP53 ubiquitin specific peptidase 53 0.018212
TUBB4B tubulin, beta 4B class IVb 0.0177936
RPL3 ribosomal protein L3 0.017493
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.017356
RPS2 ribosomal protein S2 0.0170839
RPS17 ribosomal protein S17 0.0167535
AMPD3 adenosine monophosphate deaminase 3 0.0162915
EIF5 eukaryotic translation initiation factor 5 0.0160886
CFB complement factor B 0.0158558
SRRM2 serine/arginine repetitive matrix 2 0.0158539
SAMD9 sterile alpha motif domain containing 9 0.0153759
OAS3 2'-5'-oligoadenylate synthetase 3, 100kDa 0.0149969
CEP250 centrosomal protein 250kDa 0.0149901
HSPA8 heat shock 70kDa protein 8 0.014953
PLEC plectin 0.0149125
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0145465
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0144603
EIF4B eukaryotic translation initiation factor 4B 0.0144531
RPL21 ribosomal protein L21 0.0143793
TPM3 tropomyosin 3 0.0141208
RPS27 ribosomal protein S27 0.014044
MKI67 marker of proliferation Ki-67 0.0140192
RPL13A ribosomal protein L13a 0.0138091
SLFN5 schlafen family member 5 0.013457
SAMD4A sterile alpha motif domain containing 4A 0.013422
TNIP1 TNFAIP3 interacting protein 1 0.0133556
KIF3B kinesin family member 3B 0.0132559
DNER delta/notch-like EGF repeat containing 0.0132489
DSPP dentin sialophosphoprotein 0.0129385
KIAA1217 KIAA1217 0.012928
RPL5 ribosomal protein L5 0.0128081
PATJ PATJ crumbs cell polarity complex component 0.0125509
C3 complement component 3 0.0125389
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) 0.0125136
NFE2L1 nuclear factor, erythroid 2-like 1 0.0124305
SRSF3 serine/arginine-rich splicing factor 3 0.0123228
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 0.0122342
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0122191
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0122115
CKAP5 cytoskeleton associated protein 5 0.0121949
HMMR hyaluronan-mediated motility receptor (RHAMM) 0.0121074
TUBA1B tubulin, alpha 1b 0.0120753
IFIT1 interferon-induced protein with tetratricopeptide repeats 1 0.0120651
PGM3 phosphoglucomutase 3 0.0119038
VCP valosin containing protein 0.0118774
EIF2S2 eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa 0.011584
RPS6 ribosomal protein S6 0.0115225
CENPF centromere protein F, 350/400kDa 0.0115206
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0115193
RPS16 ribosomal protein S16 0.0113505
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0112968
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.01116
CPNE1 copine I 0.0111334
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa 0.0111228
PDCD5 programmed cell death 5 0.0110725
ZFC3H1 zinc finger, C3H1-type containing 0.0110648
MT1E metallothionein 1E 0.0109227
RPS15A ribosomal protein S15a 0.0109219
DNAH14 dynein, axonemal, heavy chain 14 0.0108698
LMO7 LIM domain 7 0.0108626
OAS2 2'-5'-oligoadenylate synthetase 2, 69/71kDa 0.010834
ASCC3 activating signal cointegrator 1 complex subunit 3 0.0107817
CASK calcium/calmodulin-dependent serine protein kinase (MAGUK family) 0.0107633
DDX3X DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked 0.0107353
TRIM22 tripartite motif containing 22 0.0107204
RBCK1 RanBP-type and C3HC4-type zinc finger containing 1 0.0106364
ATF7IP2 activating transcription factor 7 interacting protein 2 0.0106259
TTC28 tetratricopeptide repeat domain 28 0.0105907
SUPT6H suppressor of Ty 6 homolog (S. cerevisiae) 0.0105152
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.0104192
MARCHF3 membrane associated ring-CH-type finger 3 0.0104043
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.0103944
TRIM25 tripartite motif containing 25 0.0103662

decreased expression

Symbol Name Standardized Value
VIM vimentin -0.323177
MARCKS myristoylated alanine-rich protein kinase C substrate -0.177729
FRMD4A FERM domain containing 4A -0.158607
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.143485
PGK1 phosphoglycerate kinase 1 -0.116563
UGCG UDP-glucose ceramide glucosyltransferase -0.111118
COL6A3 collagen, type VI, alpha 3 -0.105387
AKAP12 A kinase (PRKA) anchor protein 12 -0.0985702
NAMPT nicotinamide phosphoribosyltransferase -0.0941372
IER3 immediate early response 3 -0.0931811
IQCJ-SCHIP1 IQCJ-SCHIP1 readthrough -0.0891964
CD44 CD44 molecule (Indian blood group) -0.0877914
PDE10A phosphodiesterase 10A -0.0871949
VCL vinculin -0.0849678
LDHA lactate dehydrogenase A -0.0829485
EGR1 early growth response 1 -0.0811845
GLIS3 GLIS family zinc finger 3 -0.0786001
ANXA2 annexin A2 -0.0737943
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0698692
IGFBP3 insulin-like growth factor binding protein 3 -0.0673715
MYOF myoferlin -0.0668576
SOD2 superoxide dismutase 2, mitochondrial -0.0636448
TMSB10 thymosin beta 10 -0.0635623
ZMYND8 zinc finger, MYND-type containing 8 -0.0629045
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0622873
PNRC1 proline-rich nuclear receptor coactivator 1 -0.0622137
SFRP1 secreted frizzled-related protein 1 -0.0619982
GNAS GNAS complex locus -0.0591069
FTH1 ferritin, heavy polypeptide 1 -0.0570269
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.0559408
TPT1 tumor protein, translationally-controlled 1 -0.0558158
B2M beta-2-microglobulin -0.0553771
ZNF292 zinc finger protein 292 -0.0553302
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.055168
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0546554
VCAN versican -0.0546442
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 -0.0528477
FNDC3B fibronectin type III domain containing 3B -0.0513389
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0500478
GRIN2A glutamate receptor, ionotropic, N-methyl D-aspartate 2A -0.0495254
TRIO trio Rho guanine nucleotide exchange factor -0.0493324
TNS3 tensin 3 -0.0488601
GPC6 glypican 6 -0.0482924
CTSD cathepsin D -0.0471953
DEK DEK proto-oncogene -0.0471403
NPEPPS aminopeptidase puromycin sensitive -0.0471189
FTL ferritin, light polypeptide -0.0470312
DLG1 discs, large homolog 1 (Drosophila) -0.04699
NAV1 neuron navigator 1 -0.0468798
EXT1 exostosin glycosyltransferase 1 -0.0468335
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0464421
NDRG1 N-myc downstream regulated 1 -0.0461834
ELL2 elongation factor, RNA polymerase II, 2 -0.0461771
FN1 fibronectin 1 -0.0460789
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0460087
STC1 stanniocalcin 1 -0.0457312
HELZ helicase with zinc finger -0.0454148
HLA-B major histocompatibility complex, class I, B -0.0447221
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0444782
AKT3 v-akt murine thymoma viral oncogene homolog 3 -0.044407
P4HA2 prolyl 4-hydroxylase, alpha polypeptide II -0.044348
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0443155
RAI14 retinoic acid induced 14 -0.0413629
CADM1 cell adhesion molecule 1 -0.0413181
PLIN2 perilipin 2 -0.0410051
HMGA1 high mobility group AT-hook 1 -0.0408654
TENT5A terminal nucleotidyltransferase 5A -0.0404255
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) -0.0400505
SEPTIN7 septin 7 -0.0395938
ATP13A3 ATPase type 13A3 -0.0395747
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0395217
RPS24 ribosomal protein S24 -0.0392569
TKT transketolase -0.0389304
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0387436
TMSB4X thymosin beta 4, X-linked -0.038525
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.037438
ZFAND3 zinc finger, AN1-type domain 3 -0.037007
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 -0.0368901
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0365808
BASP1 brain abundant, membrane attached signal protein 1 -0.0364995
UBE2E2 ubiquitin-conjugating enzyme E2E 2 -0.0357411
JUN jun proto-oncogene -0.0355029
AHNAK AHNAK nucleoprotein -0.0353611
LOC112694756 uncharaterized LOC112694756 -0.0353387
JMJD1C jumonji domain containing 1C -0.0353311
ZBTB38 zinc finger and BTB domain containing 38 -0.0348352
TMEM123 transmembrane protein 123 -0.0348269
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 -0.0341977
ERBIN erbb2 interacting protein -0.034021
KLF6 Kruppel-like factor 6 -0.0337062
TGFBI transforming growth factor, beta-induced, 68kDa -0.0327906
EDIL3 EGF-like repeats and discoidin I-like domains 3 -0.0320013
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0319541
COL1A1 collagen, type I, alpha 1 -0.0312731
WTAP Wilms tumor 1 associated protein -0.0311138
SNX9 sorting nexin 9 -0.0308885
CDH13 cadherin 13 -0.0307886
GOLGA4 golgin A4 -0.0307399
UBA6 ubiquitin-like modifier activating enzyme 6 -0.0301604
DIAPH2 diaphanous-related formin 2 -0.0300861