Docetaxel_LS 180 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Docetaxel perturbation in LS 180 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Docetaxel_LS 180 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
CEMIP cell migration inducing protein, hyaluronan binding 0.134528
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 0.101188
AREG amphiregulin 0.082573
FAT1 FAT atypical cadherin 1 0.0782205
GMDS GDP-mannose 4,6-dehydratase 0.0766604
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0686745
EEF2 eukaryotic translation elongation factor 2 0.0669122
EXT1 exostosin glycosyltransferase 1 0.0656898
MYO1E myosin IE 0.0627594
TUBB4B tubulin, beta 4B class IVb 0.0584762
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0580271
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0552557
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0524357
VCL vinculin 0.0503189
MACF1 microtubule-actin crosslinking factor 1 0.0499192
LDHA lactate dehydrogenase A 0.0486468
RNF145 ring finger protein 145 0.0477707
VMP1 vacuole membrane protein 1 0.0477209
EPS8 epidermal growth factor receptor pathway substrate 8 0.046814
MYH9 myosin, heavy chain 9, non-muscle 0.0462137
TCF7L2 transcription factor 7-like 2 (T-cell specific, HMG-box) 0.0458562
MUC6 mucin 6, oligomeric mucus/gel-forming 0.0456781
ITGA6 integrin, alpha 6 0.0443369
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0426625
ONECUT3 one cut homeobox 3 0.0424757
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0424255
TRIM2 tripartite motif containing 2 0.0419768
FTH1 ferritin, heavy polypeptide 1 0.0419693
CENPF centromere protein F, 350/400kDa 0.0418952
AKAP13 A kinase (PRKA) anchor protein 13 0.0413235
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0403322
VEGFA vascular endothelial growth factor A 0.0396199
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme 0.0392898
RPL23 ribosomal protein L23 0.0387432
TPM3 tropomyosin 3 0.0383607
RACK1 receptor for activated C kinase 1 0.0371541
CTBP2 C-terminal binding protein 2 0.0371073
RPL3 ribosomal protein L3 0.0368638
HSPA8 heat shock 70kDa protein 8 0.0367081
ARHGAP26 Rho GTPase activating protein 26 0.0363195
CD44 CD44 molecule (Indian blood group) 0.0361957
GAREM1 GRB2 associated regulator of MAPK1 subtype 1 0.0361692
TNFRSF21 tumor necrosis factor receptor superfamily, member 21 0.0352326
LMO7 LIM domain 7 0.0350906
UBE2H ubiquitin-conjugating enzyme E2H 0.0343353
LOC102724023 ES1 protein homolog, mitochondrial 0.0339547
MUC13 mucin 13, cell surface associated 0.033847
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0338181
CEMIP2 cell migration inducing hyaluronidase 2 0.0330619
TXNIP thioredoxin interacting protein 0.0328694
CSNK1A1 casein kinase 1, alpha 1 0.0315346
MYO5B myosin VB 0.0314141
RNF43 ring finger protein 43 0.0313268
MED13L mediator complex subunit 13-like 0.0312924
DSPP dentin sialophosphoprotein 0.0308484
MED13 mediator complex subunit 13 0.0306638
APLP2 amyloid beta (A4) precursor-like protein 2 0.0302271
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0294146
LGR4 leucine-rich repeat containing G protein-coupled receptor 4 0.0291303
SMAD2 SMAD family member 2 0.0289315
LRCH1 leucine-rich repeats and calponin homology (CH) domain containing 1 0.0285942
HERPUD1 homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 0.0285319
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0283633
USP53 ubiquitin specific peptidase 53 0.0278664
SOX9 SRY (sex determining region Y)-box 9 0.0276596
RAPGEF2 Rap guanine nucleotide exchange factor (GEF) 2 0.027647
USP6NL USP6 N-terminal like 0.0274131
CCNL1 cyclin L1 0.027167
ZSWIM6 zinc finger, SWIM-type containing 6 0.0270293
USP9X ubiquitin specific peptidase 9, X-linked 0.0269725
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0266648
B2M beta-2-microglobulin 0.02654
INTS6 integrator complex subunit 6 0.0262013
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0260296
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0260203
ITPRID2 ITPR interacting domain containing 2 0.0259226
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 0.0258649
NRXN3 neurexin 3 0.0258449
SLCO1B3-SLCO1B7 SLCO1B3-SLCO1B7 readthrough 0.0258415
LRP6 low density lipoprotein receptor-related protein 6 0.0258177
NEBL nebulette 0.0256643
TPI1 triosephosphate isomerase 1 0.0255518
SIK3 SIK family kinase 3 0.0254424
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b 0.0251424
CLCN3 chloride channel, voltage-sensitive 3 0.0250617
PDZD8 PDZ domain containing 8 0.0242727
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0242366
CYP3A5 cytochrome P450, family 3, subfamily A, polypeptide 5 0.023931
MBNL1 muscleblind-like splicing regulator 1 0.0237412
RPS3 ribosomal protein S3 0.0234561
PLS1 plastin 1 0.0233279
SRRM2 serine/arginine repetitive matrix 2 0.0232067
TMBIM6 transmembrane BAX inhibitor motif containing 6 0.023167
RYBP RING1 and YY1 binding protein 0.0230506
PCBP2 poly(rC) binding protein 2 0.0225619
FOXP1 forkhead box P1 0.022538
SFPQ splicing factor proline/glutamine-rich 0.0224554
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0221326
DPY19L1 dpy-19-like 1 (C. elegans) 0.0219505
DNAJC1 DnaJ (Hsp40) homolog, subfamily C, member 1 0.0218038

decreased expression

Symbol Name Standardized Value
NPSR1 neuropeptide S receptor 1 -0.214544
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.153415
TPT1 tumor protein, translationally-controlled 1 -0.146772
PTMA prothymosin, alpha -0.126422
FLNB filamin B, beta -0.0936803
RPS6 ribosomal protein S6 -0.076857
ANXA2 annexin A2 -0.0711044
S100A6 S100 calcium binding protein A6 -0.0638739
GCC2 GRIP and coiled-coil domain containing 2 -0.0633585
AHNAK AHNAK nucleoprotein -0.0631633
ALCAM activated leukocyte cell adhesion molecule -0.062708
NALF1 NALCN channel auxiliary factor 1 -0.0570325
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0557849
SLC35F3 solute carrier family 35, member F3 -0.0545662
GREB1L growth regulation by estrogen in breast cancer-like -0.0534589
TPM4 tropomyosin 4 -0.0518914
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0506635
ACTG1 actin gamma 1 -0.0495351
RPLP1 ribosomal protein, large, P1 -0.0481787
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0478541
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0477221
ANTXR2 anthrax toxin receptor 2 -0.0460561
CCND1 cyclin D1 -0.0455427
MUC17 mucin 17, cell surface associated -0.0447959
RPS24 ribosomal protein S24 -0.0443506
PPARG peroxisome proliferator-activated receptor gamma -0.0426254
BCAT1 branched chain amino-acid transaminase 1, cytosolic -0.041847
RNF217 ring finger protein 217 -0.0416355
RIN2 Ras and Rab interactor 2 -0.0404414
AGR2 anterior gradient 2 -0.0402617
FERMT1 fermitin family member 1 -0.0398999
EZR ezrin -0.0395567
MUC5AC mucin 5AC, oligomeric mucus/gel-forming -0.0391484
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0379803
PTPRR protein tyrosine phosphatase, receptor type, R -0.0376611
MAML2 mastermind-like 2 (Drosophila) -0.0372241
ITGB4 integrin, beta 4 -0.0371471
PDE4D phosphodiesterase 4D, cAMP-specific -0.0359995
PRSS3 protease, serine, 3 -0.0353997
FUT8 fucosyltransferase 8 (alpha (1,6) fucosyltransferase) -0.0346841
KLK10 kallikrein-related peptidase 10 -0.0334713
ZMYND8 zinc finger, MYND-type containing 8 -0.0330898
PIGR polymeric immunoglobulin receptor -0.0330292
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0325379
KPNB1 karyopherin (importin) beta 1 -0.0320325
RPL7A ribosomal protein L7a -0.0309523
TMSB10 thymosin beta 10 -0.0309231
BTG1 B-cell translocation gene 1, anti-proliferative -0.0307536
ARHGAP5 Rho GTPase activating protein 5 -0.0307047
CALB1 calbindin 1, 28kDa -0.0305003
RPLP0 ribosomal protein, large, P0 -0.0304994
BACE2 beta-site APP-cleaving enzyme 2 -0.03047
EHBP1 EH domain binding protein 1 -0.0304567
CANX calnexin -0.0303645
NFIA nuclear factor I/A -0.0298854
ZNF33A zinc finger protein 33A -0.0276979
ESYT2 extended synaptotagmin-like protein 2 -0.0273347
IER3 immediate early response 3 -0.0271279
HDLBP high density lipoprotein binding protein -0.0266282
HMGB1 high mobility group box 1 -0.02653
BZW1 basic leucine zipper and W2 domains 1 -0.025819
GTF2IRD1 GTF2I repeat domain containing 1 -0.0255592
SBF2 SET binding factor 2 -0.0254012
RPL37 ribosomal protein L37 -0.0253927
PARP4 poly (ADP-ribose) polymerase family, member 4 -0.0251016
DYNC2I1 dynein 2 intermediate chain 1 -0.0249341
FRMD5 FERM domain containing 5 -0.0247012
EPCAM epithelial cell adhesion molecule -0.0245797
CDC42BPA CDC42 binding protein kinase alpha (DMPK-like) -0.024467
SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 -0.0238924
RPS16 ribosomal protein S16 -0.023887
PLCB4 phospholipase C, beta 4 -0.0237497
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0237464
DSG2 desmoglein 2 -0.023575
SH3D19 SH3 domain containing 19 -0.0235688
RPL38 ribosomal protein L38 -0.0234626
VDAC1 voltage-dependent anion channel 1 -0.0233151
DEK DEK proto-oncogene -0.023277
GRIN2B glutamate receptor, ionotropic, N-methyl D-aspartate 2B -0.0231066
CDK13 cyclin-dependent kinase 13 -0.0230316
KCNK1 potassium channel, two pore domain subfamily K, member 1 -0.0229583
KLF3 Kruppel-like factor 3 (basic) -0.0228107
IRF2BP2 interferon regulatory factor 2 binding protein 2 -0.0227813
KRT8 keratin 8, type II -0.0222581
HDAC2 histone deacetylase 2 -0.0222051
RPS6KA5 ribosomal protein S6 kinase, 90kDa, polypeptide 5 -0.0221051
RPS27A ribosomal protein S27a -0.0221017
DLGAP1 discs, large (Drosophila) homolog-associated protein 1 -0.0221014
TFF1 trefoil factor 1 -0.0218346
NSD3 nuclear receptor binding SET domain protein 3 -0.0218112
TFF3 trefoil factor 3 (intestinal) -0.0218108
AHI1 Abelson helper integration site 1 -0.0218099
BTBD9 BTB (POZ) domain containing 9 -0.0217101
RPL13A ribosomal protein L13a -0.0215183
FAF1 Fas (TNFRSF6) associated factor 1 -0.0212949
RPL34 ribosomal protein L34 -0.0212346
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0211696
LIMS1 LIM and senescent cell antigen-like domains 1 -0.0209519
RRBP1 ribosome binding protein 1 -0.0207351
TMCC1 transmembrane and coiled-coil domain family 1 -0.0206845