Docetaxel_SW 1088 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Docetaxel perturbation in SW 1088 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Docetaxel_SW 1088 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FTH1 ferritin, heavy polypeptide 1 0.10368
IGFBP3 insulin-like growth factor binding protein 3 0.103035
NRXN3 neurexin 3 0.097396
NDRG1 N-myc downstream regulated 1 0.0933241
EXT1 exostosin glycosyltransferase 1 0.0802491
KYNU kynureninase 0.0769848
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0746362
GLIS3 GLIS family zinc finger 3 0.0688933
HIP1 huntingtin interacting protein 1 0.067552
SOD2 superoxide dismutase 2, mitochondrial 0.0598635
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0594003
PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 0.0564523
ZNF292 zinc finger protein 292 0.0518325
NAMPT nicotinamide phosphoribosyltransferase 0.049892
HPCAL1 hippocalcin-like 1 0.0486027
AOPEP aminopeptidase O (putative) 0.0480365
RYBP RING1 and YY1 binding protein 0.0480291
MEF2A myocyte enhancer factor 2A 0.0472204
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0442216
BBS9 Bardet-Biedl syndrome 9 0.0441446
PRELID2 PRELI domain containing 2 0.0435894
HILPDA hypoxia inducible lipid droplet-associated 0.0434363
FAM20C family with sequence similarity 20, member C 0.0433078
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A 0.042784
KMT2E lysine (K)-specific methyltransferase 2E 0.0424522
AHR aryl hydrocarbon receptor 0.042429
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) 0.0423715
ECE1 endothelin converting enzyme 1 0.0422546
MYH9 myosin, heavy chain 9, non-muscle 0.0416439
ERRFI1 ERBB receptor feedback inhibitor 1 0.0413672
MACF1 microtubule-actin crosslinking factor 1 0.0412537
RNF145 ring finger protein 145 0.040771
RICTOR RPTOR independent companion of MTOR, complex 2 0.0405873
TSPAN9 tetraspanin 9 0.0403574
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.0403281
LOC112694756 uncharaterized LOC112694756 0.0402963
PRSS23 protease, serine, 23 0.03993
DNAH11 dynein, axonemal, heavy chain 11 0.0395272
CD44 CD44 molecule (Indian blood group) 0.0388726
ANKRD11 ankyrin repeat domain 11 0.0382975
TIMP3 TIMP metallopeptidase inhibitor 3 0.0375634
PIK3R3 phosphoinositide-3-kinase, regulatory subunit 3 (gamma) 0.0371844
PTPN14 protein tyrosine phosphatase, non-receptor type 14 0.0371355
ZBTB20 zinc finger and BTB domain containing 20 0.0357709
PGK1 phosphoglycerate kinase 1 0.0356495
CD59 CD59 molecule, complement regulatory protein 0.034846
FNDC3B fibronectin type III domain containing 3B 0.0345692
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0341121
FAM13A family with sequence similarity 13, member A 0.0335583
CEMIP cell migration inducing protein, hyaluronan binding 0.0330922
DPYD dihydropyrimidine dehydrogenase 0.0325671
INSIG2 insulin induced gene 2 0.0317383
STC1 stanniocalcin 1 0.0314613
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0312296
RAB31 RAB31, member RAS oncogene family 0.0310701
CLEC1B C-type lectin domain family 1, member B 0.0308508
SQSTM1 sequestosome 1 0.0303079
BMERB1 bMERB domain containing 1 0.0298214
INTS6 integrator complex subunit 6 0.0297611
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0295801
SSH2 slingshot protein phosphatase 2 0.0295526
UGCG UDP-glucose ceramide glucosyltransferase 0.0295068
VEGFC vascular endothelial growth factor C 0.0295011
JPH2 junctophilin 2 0.0294996
CAV1 caveolin 1, caveolae protein, 22kDa 0.0294313
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0290019
SETBP1 SET binding protein 1 0.0287535
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 0.0287123
FUS FUS RNA binding protein 0.0285777
EPAS1 endothelial PAS domain protein 1 0.0285176
ZMIZ1 zinc finger, MIZ-type containing 1 0.0284777
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0284673
TUBB tubulin, beta class I 0.0279542
CLIC4 chloride intracellular channel 4 0.0276386
BZW2 basic leucine zipper and W2 domains 2 0.0276123
SLC6A6 solute carrier family 6 (neurotransmitter transporter), member 6 0.0274989
WLS wntless Wnt ligand secretion mediator 0.0273234
ELL2 elongation factor, RNA polymerase II, 2 0.026895
MAP3K5 mitogen-activated protein kinase kinase kinase 5 0.0268092
SLC39A14 solute carrier family 39 (zinc transporter), member 14 0.0265049
ANKRD37 ankyrin repeat domain 37 0.0264622
LPP LIM domain containing preferred translocation partner in lipoma 0.0264327
CYLD cylindromatosis (turban tumor syndrome) 0.0263538
HMGA2 high mobility group AT-hook 2 0.0261276
ACER3 alkaline ceramidase 3 0.026051
TAPBP TAP binding protein (tapasin) 0.0258185
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0256947
SP100 SP100 nuclear antigen 0.0254841
CDH11 cadherin 11, type 2, OB-cadherin (osteoblast) 0.0254183
MICAL3 microtubule associated monooxygenase, calponin and LIM domain containing 3 0.0252812
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0252164
SPRED2 sprouty-related, EVH1 domain containing 2 0.0249903
ARHGAP24 Rho GTPase activating protein 24 0.0249846
TRA2A transformer 2 alpha homolog (Drosophila) 0.0248556
LAMB3 laminin, beta 3 0.0247939
CSNK1A1 casein kinase 1, alpha 1 0.0247026
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0245354
CDKAL1 CDK5 regulatory subunit associated protein 1-like 1 0.0243858
LOX lysyl oxidase 0.0243566
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0242283

decreased expression

Symbol Name Standardized Value
TMSB10 thymosin beta 10 -0.15064
MT2A metallothionein 2A -0.14933
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.118108
TRIO trio Rho guanine nucleotide exchange factor -0.102121
VIM vimentin -0.100725
IL6 interleukin 6 -0.0862337
AKAP12 A kinase (PRKA) anchor protein 12 -0.0856178
CDH13 cadherin 13 -0.0732696
UBC ubiquitin C -0.0695165
HLA-B major histocompatibility complex, class I, B -0.067243
COL1A2 collagen, type I, alpha 2 -0.0668248
EGFR epidermal growth factor receptor -0.0657114
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0560155
IARS1 isoleucyl-tRNA synthetase 1 -0.0538884
ACTG1 actin gamma 1 -0.0533051
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.0524839
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0509714
PDIA3 protein disulfide isomerase family A, member 3 -0.0507364
ERC2 ELKS/RAB6-interacting/CAST family member 2 -0.0506335
SDC4 syndecan 4 -0.0491497
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) -0.0489123
RAI14 retinoic acid induced 14 -0.0485798
PTMA prothymosin, alpha -0.0485702
AKT3 v-akt murine thymoma viral oncogene homolog 3 -0.0443482
GRB10 growth factor receptor-bound protein 10 -0.0432434
ANKRD17 ankyrin repeat domain 17 -0.0393172
PRRC2C proline-rich coiled-coil 2C -0.0380337
COL5A2 collagen, type V, alpha 2 -0.0379091
TPT1 tumor protein, translationally-controlled 1 -0.0376972
RPS3 ribosomal protein S3 -0.0373407
SEC24D SEC24 family member D -0.0367885
P4HA2 prolyl 4-hydroxylase, alpha polypeptide II -0.0367579
COL6A1 collagen, type VI, alpha 1 -0.0366788
RPL23 ribosomal protein L23 -0.0364482
COL1A1 collagen, type I, alpha 1 -0.0361474
FLNB filamin B, beta -0.0356401
RTN4 reticulon 4 -0.035522
USP34 ubiquitin specific peptidase 34 -0.0350396
COL4A2 collagen, type IV, alpha 2 -0.0349388
LCOR ligand dependent nuclear receptor corepressor -0.0341782
RPS6 ribosomal protein S6 -0.0341158
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0341074
TPM2 tropomyosin 2 (beta) -0.033861
EEF2 eukaryotic translation elongation factor 2 -0.0337524
AKAP9 A kinase (PRKA) anchor protein 9 -0.0333095
CDK6 cyclin-dependent kinase 6 -0.0331938
TPM4 tropomyosin 4 -0.0331243
CALD1 caldesmon 1 -0.0330512
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0328063
AHNAK AHNAK nucleoprotein -0.0323041
CARD16 caspase recruitment domain family, member 16 -0.0320723
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0319631
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 -0.0318652
DEK DEK proto-oncogene -0.031747
DSCAM Down syndrome cell adhesion molecule -0.0315441
POTEF POTE ankyrin domain family, member F -0.0313869
GCC2 GRIP and coiled-coil domain containing 2 -0.0312047
ITGA5 integrin, alpha 5 (fibronectin receptor, alpha polypeptide) -0.0311635
SIPA1L3 signal-induced proliferation-associated 1 like 3 -0.0308779
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats -0.0306937
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0306566
LIMS1 LIM and senescent cell antigen-like domains 1 -0.0303429
PDE4D phosphodiesterase 4D, cAMP-specific -0.0303287
ANXA5 annexin A5 -0.0299792
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma -0.0297431
SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 -0.029638
JAK1 Janus kinase 1 -0.0291645
DST dystonin -0.0291457
CFDP1 craniofacial development protein 1 -0.029039
AFF3 AF4/FMR2 family, member 3 -0.0288991
ATRX alpha thalassemia/mental retardation syndrome X-linked -0.0287987
MCL1 myeloid cell leukemia 1 -0.0287423
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0286575
ZCCHC7 zinc finger, CCHC domain containing 7 -0.028576
TENT5A terminal nucleotidyltransferase 5A -0.0284193
TRPC4AP transient receptor potential cation channel, subfamily C, member 4 associated protein -0.0283055
PAFAH1B1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa) -0.0283005
PAPSS2 3'-phosphoadenosine 5'-phosphosulfate synthase 2 -0.0282735
GLS2 glutaminase 2 (liver, mitochondrial) -0.0282314
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0278761
NUCB2 nucleobindin 2 -0.0278596
SPAG9 sperm associated antigen 9 -0.0278342
COL6A3 collagen, type VI, alpha 3 -0.0277816
APLP2 amyloid beta (A4) precursor-like protein 2 -0.0277615
MYO10 myosin X -0.0274055
CTBP2 C-terminal binding protein 2 -0.0273715
SRRM2 serine/arginine repetitive matrix 2 -0.0273389
SEC31A SEC31 homolog A (S. cerevisiae) -0.0270583
HS2ST1 heparan sulfate 2-O-sulfotransferase 1 -0.0270251
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0270207
RBM25 RNA binding motif protein 25 -0.0268588
CCNI cyclin I -0.0268509
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0266196
TXNIP thioredoxin interacting protein -0.0265631
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa -0.0265212
STK17A serine/threonine kinase 17a -0.0264953
BDP1 B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB -0.0264184
NALF1 NALCN channel auxiliary factor 1 -0.0261296
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.0257617
PRKRIP1 PRKR interacting protein 1 (IL11 inducible) -0.0257225