Doxorubicin (hydrochloride)_J82 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Doxorubicin (hydrochloride) perturbation in J82 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Doxorubicin (hydrochloride)_J82 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
SLIT2 slit homolog 2 (Drosophila) 0.0780364
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.065892
GLS2 glutaminase 2 (liver, mitochondrial) 0.0645822
FN1 fibronectin 1 0.0633173
HLA-E major histocompatibility complex, class I, E 0.0627315
ABI3BP ABI family, member 3 (NESH) binding protein 0.0563949
EXT1 exostosin glycosyltransferase 1 0.0507409
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.0506456
PHACTR1 phosphatase and actin regulator 1 0.0462327
MYH9 myosin, heavy chain 9, non-muscle 0.0442754
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0439324
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0438783
NALF1 NALCN channel auxiliary factor 1 0.0437373
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 0.0427936
TLE4 transducin-like enhancer of split 4 0.0414526
FLNA filamin A, alpha 0.0410769
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0399783
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0372716
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.0364058
ZNF804A zinc finger protein 804A 0.0359733
DIAPH3 diaphanous-related formin 3 0.0358035
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0346189
HLA-A major histocompatibility complex, class I, A 0.031943
RNF213 ring finger protein 213 0.0317075
ZNF432 zinc finger protein 432 0.0316933
FNIP1 folliculin interacting protein 1 0.0314995
CEMIP2 cell migration inducing hyaluronidase 2 0.0311097
CAVIN1 caveolae associated protein 1 0.0306089
PTPRG protein tyrosine phosphatase, receptor type, G 0.0304214
SDK1 sidekick cell adhesion molecule 1 0.0299794
PTPRK protein tyrosine phosphatase, receptor type, K 0.0297951
E2F3 E2F transcription factor 3 0.0293723
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0290876
PARP14 poly (ADP-ribose) polymerase family, member 14 0.0290031
UBAP2 ubiquitin associated protein 2 0.0290002
ASPH aspartate beta-hydroxylase 0.0288689
ZSWIM6 zinc finger, SWIM-type containing 6 0.0287751
MBNL1 muscleblind-like splicing regulator 1 0.0287345
CENPP centromere protein P 0.0285206
MKI67 marker of proliferation Ki-67 0.027502
AHNAK AHNAK nucleoprotein 0.0272265
PRKCA protein kinase C, alpha 0.0268674
HMGB2 high mobility group box 2 0.0266672
ANKRD10 ankyrin repeat domain 10 0.0261801
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0260016
PRRC2B proline-rich coiled-coil 2B 0.0259419
OLR1 oxidized low density lipoprotein (lectin-like) receptor 1 0.0258027
BAZ1A bromodomain adjacent to zinc finger domain, 1A 0.0254529
EPB41L2 erythrocyte membrane protein band 4.1-like 2 0.0250418
SMAD3 SMAD family member 3 0.024988
TOP1 topoisomerase (DNA) I 0.0248131
CSTF3 cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa 0.0244853
HDAC9 histone deacetylase 9 0.0242741
HLA-C major histocompatibility complex, class I, C 0.0242017
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 0.0240773
PTPN1 protein tyrosine phosphatase, non-receptor type 1 0.0237057
NSUN6 NOP2/Sun domain family, member 6 0.0237036
CANX calnexin 0.0236862
STARD13 StAR-related lipid transfer (START) domain containing 13 0.0233868
POLA1 polymerase (DNA directed), alpha 1, catalytic subunit 0.0229869
FER fer (fps/fes related) tyrosine kinase 0.0224668
DGKH diacylglycerol kinase, eta 0.0224344
ALCAM activated leukocyte cell adhesion molecule 0.0224033
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0223836
ANKRD33B ankyrin repeat domain 33B 0.0223424
ZNF841 zinc finger protein 841 0.0220489
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0218647
ANKHD1 ankyrin repeat and KH domain containing 1 0.0217526
SAMD4A sterile alpha motif domain containing 4A 0.021515
RFC3 replication factor C (activator 1) 3, 38kDa 0.0214603
COL4A2 collagen, type IV, alpha 2 0.0214578
PSPC1 paraspeckle component 1 0.0213908
RIGI RNA sensor RIG-I 0.0213442
DENND4A DENN/MADD domain containing 4A 0.0210753
SERPINA2 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 2 (gene/pseudogene) 0.0210551
KDM4C lysine (K)-specific demethylase 4C 0.021028
MED13 mediator complex subunit 13 0.0207688
FAF1 Fas (TNFRSF6) associated factor 1 0.0206592
PIK3R3 phosphoinositide-3-kinase, regulatory subunit 3 (gamma) 0.0205537
DPYD dihydropyrimidine dehydrogenase 0.0205242
VCL vinculin 0.0204785
EPHA4 EPH receptor A4 0.0203341
PCBP2 poly(rC) binding protein 2 0.0201565
CDK19 cyclin-dependent kinase 19 0.0195699
CFLAR CASP8 and FADD-like apoptosis regulator 0.0195591
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0194194
FSTL1 follistatin-like 1 0.0193509
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 0.0192645
NAV2 neuron navigator 2 0.019128
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.0189646
RGS7 regulator of G-protein signaling 7 0.0186097
HELLS helicase, lymphoid-specific 0.0185293
AOPEP aminopeptidase O (putative) 0.0182933
ZCCHC7 zinc finger, CCHC domain containing 7 0.0181982
PKP4 plakophilin 4 0.018103
KNTC1 kinetochore associated 1 0.0180731
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0178557
LGALS12 lectin, galactoside-binding, soluble, 12 0.0177241
ACTN1 actinin, alpha 1 0.0177048
CLSPN claspin 0.0176159

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.25781
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.250952
FTL ferritin, light polypeptide -0.22989
MT2A metallothionein 2A -0.150381
UGCG UDP-glucose ceramide glucosyltransferase -0.119165
TRIO trio Rho guanine nucleotide exchange factor -0.0885075
FTH1 ferritin, heavy polypeptide 1 -0.0850361
MT1X metallothionein 1X -0.081639
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0689678
DEK DEK proto-oncogene -0.0625345
UBA6 ubiquitin-like modifier activating enzyme 6 -0.0611121
NDRG1 N-myc downstream regulated 1 -0.0570064
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0561605
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0531362
TXNRD1 thioredoxin reductase 1 -0.0505441
FLNB filamin B, beta -0.0470659
ADM adrenomedullin -0.0454112
ENO1 enolase 1, (alpha) -0.0428961
SLC12A8 solute carrier family 12, member 8 -0.0404482
FOSL1 FOS-like antigen 1 -0.0398661
PLIN2 perilipin 2 -0.0393721
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0388986
GOLGA4 golgin A4 -0.0387274
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0382725
DLG1 discs, large homolog 1 (Drosophila) -0.037996
LDHA lactate dehydrogenase A -0.0371689
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.0361763
ARF4 ADP-ribosylation factor 4 -0.0340955
POTEF POTE ankyrin domain family, member F -0.0326595
HEG1 heart development protein with EGF-like domains 1 -0.0320611
ELL2 elongation factor, RNA polymerase II, 2 -0.0315821
F3 coagulation factor III (thromboplastin, tissue factor) -0.0306621
UBC ubiquitin C -0.0304122
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0301478
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0300329
PFN1 profilin 1 -0.0300153
TPD52 tumor protein D52 -0.0298281
BASP1 brain abundant, membrane attached signal protein 1 -0.0290703
CTSD cathepsin D -0.0290409
LMAN1 lectin, mannose-binding, 1 -0.0288851
NAMPT nicotinamide phosphoribosyltransferase -0.028679
RPS6 ribosomal protein S6 -0.0286051
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0284521
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0280877
HILPDA hypoxia inducible lipid droplet-associated -0.0280875
PTBP3 polypyrimidine tract binding protein 3 -0.0275276
SBF2 SET binding factor 2 -0.0266739
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0264415
BHLHE40 basic helix-loop-helix family, member e40 -0.025079
FNDC3B fibronectin type III domain containing 3B -0.024631
TUBB tubulin, beta class I -0.0245364
PPDPF pancreatic progenitor cell differentiation and proliferation factor -0.024111
KMT2C lysine (K)-specific methyltransferase 2C -0.0240692
MAP4K5 mitogen-activated protein kinase kinase kinase kinase 5 -0.023898
LOC112694756 uncharaterized LOC112694756 -0.023495
KTN1 kinectin 1 (kinesin receptor) -0.0233126
MAP1B microtubule-associated protein 1B -0.023191
ZNF292 zinc finger protein 292 -0.0229337
KPNB1 karyopherin (importin) beta 1 -0.0223771
ACTG1 actin gamma 1 -0.0222491
PGK1 phosphoglycerate kinase 1 -0.0222238
PLK2 polo-like kinase 2 -0.0221628
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 -0.0220329
SEC61A1 Sec61 alpha 1 subunit (S. cerevisiae) -0.0218908
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0217259
TRAM1 translocation associated membrane protein 1 -0.0214756
TFG TRK-fused gene -0.0213475
VDAC1 voltage-dependent anion channel 1 -0.0212898
AFAP1 actin filament associated protein 1 -0.02082
S100A10 S100 calcium binding protein A10 -0.0206139
COPB1 coatomer protein complex, subunit beta 1 -0.0203212
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0200704
PDIA3 protein disulfide isomerase family A, member 3 -0.0200091
CBFA2T2 core-binding factor, runt domain, alpha subunit 2; translocated to, 2 -0.0197995
NPPB natriuretic peptide B -0.0193249
CAPZA1 capping protein (actin filament) muscle Z-line, alpha 1 -0.0192629
TNIK TRAF2 and NCK interacting kinase -0.0192447
EIF1 eukaryotic translation initiation factor 1 -0.0188643
TPM4 tropomyosin 4 -0.0188266
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0187407
BTG1 B-cell translocation gene 1, anti-proliferative -0.01854
PSMA7 proteasome (prosome, macropain) subunit, alpha type, 7 -0.0185113
JUN jun proto-oncogene -0.018466
RAD23B RAD23 homolog B (S. cerevisiae) -0.0184191
NUP58 nucleoporin 58 -0.0183836
SETD5 SET domain containing 5 -0.0181967
NPEPPS aminopeptidase puromycin sensitive -0.0181948
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0181184
PFN2 profilin 2 -0.0176487
PTPN14 protein tyrosine phosphatase, non-receptor type 14 -0.0175919
S100A6 S100 calcium binding protein A6 -0.0175899
BCAT1 branched chain amino-acid transaminase 1, cytosolic -0.017486
FAM162A family with sequence similarity 162, member A -0.0172872
EGR1 early growth response 1 -0.0172665
UFM1 ubiquitin-fold modifier 1 -0.0171476
KMT2E lysine (K)-specific methyltransferase 2E -0.0171336
ZEB2 zinc finger E-box binding homeobox 2 -0.0169526
COG6 component of oligomeric golgi complex 6 -0.016942
PTMA prothymosin, alpha -0.016931
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like -0.0168915