Doxorubicin (hydrochloride)_LOX-IMVI Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Doxorubicin (hydrochloride) perturbation in LOX-IMVI cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Doxorubicin (hydrochloride)_LOX-IMVI drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
EEF2 eukaryotic translation elongation factor 2 0.0848499
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0690376
PCBP2 poly(rC) binding protein 2 0.05442
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.0466981
FLNA filamin A, alpha 0.0456377
EPB41L2 erythrocyte membrane protein band 4.1-like 2 0.0424717
TMSB10 thymosin beta 10 0.0389567
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0371879
RPL13A ribosomal protein L13a 0.0344115
EPHA4 EPH receptor A4 0.0340515
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 0.0313232
FLRT2 fibronectin leucine rich transmembrane protein 2 0.0309162
TENT5A terminal nucleotidyltransferase 5A 0.0297498
EEF1G eukaryotic translation elongation factor 1 gamma 0.0278086
GLS2 glutaminase 2 (liver, mitochondrial) 0.0269483
CD109 CD109 molecule 0.0246734
FGFR1 fibroblast growth factor receptor 1 0.024599
APLP2 amyloid beta (A4) precursor-like protein 2 0.0243774
ADAM9 ADAM metallopeptidase domain 9 0.0236281
ANXA2 annexin A2 0.0230912
MRPS6 mitochondrial ribosomal protein S6 0.0228201
YBX1 Y box binding protein 1 0.0220248
RPSA ribosomal protein SA 0.0219421
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.0215607
MLEC malectin 0.0214675
EIF4A1 eukaryotic translation initiation factor 4A1 0.0213194
TPM3 tropomyosin 3 0.0212183
NOPCHAP1 NOP protein chaperone 1 0.0193702
DDB2 damage-specific DNA binding protein 2, 48kDa 0.019206
CANX calnexin 0.0190346
APAF1 apoptotic peptidase activating factor 1 0.0188661
PTPRK protein tyrosine phosphatase, receptor type, K 0.018616
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit 0.0180198
SUPT5H suppressor of Ty 5 homolog (S. cerevisiae) 0.0177636
OGA O-GlcNAcase 0.0176651
ARID4B AT rich interactive domain 4B (RBP1-like) 0.0175081
CALR calreticulin 0.0174286
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0170351
POLH polymerase (DNA directed), eta 0.0170077
PLK2 polo-like kinase 2 0.0168123
BSG basigin (Ok blood group) 0.0166141
NFE2L1 nuclear factor, erythroid 2-like 1 0.0161885
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0159729
RPS19 ribosomal protein S19 0.015831
FN1 fibronectin 1 0.0148179
RPS4X ribosomal protein S4, X-linked 0.014524
CSMD3 CUB and Sushi multiple domains 3 0.0144818
PDIA3 protein disulfide isomerase family A, member 3 0.014275
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 0.0142719
SERINC5 serine incorporator 5 0.0140662
CSNK1G1 casein kinase 1, gamma 1 0.0140398
FTH1 ferritin, heavy polypeptide 1 0.013903
DERA deoxyribose-phosphate aldolase (putative) 0.0138163
FDXR ferredoxin reductase 0.0136236
XPC xeroderma pigmentosum, complementation group C 0.0136111
GNAS GNAS complex locus 0.0135637
RRM2B ribonucleotide reductase M2 B (TP53 inducible) 0.0133074
ATP1A4 ATPase, Na+/K+ transporting, alpha 4 polypeptide 0.0131798
PTCHD4 patched domain containing 4 0.0130007
ANP32A acidic (leucine-rich) nuclear phosphoprotein 32 family, member A 0.0128565
ETNK1 ethanolamine kinase 1 0.0127529
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0126419
DRAP1 DR1-associated protein 1 (negative cofactor 2 alpha) 0.0126372
NCOA2 nuclear receptor coactivator 2 0.0126032
HLA-E major histocompatibility complex, class I, E 0.0124704
GANAB glucosidase, alpha; neutral AB 0.012242
PIK3C2A phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha 0.0122247
CXCL8 chemokine (C-X-C motif) ligand 8 0.0121597
FBXW7 F-box and WD repeat domain containing 7, E3 ubiquitin protein ligase 0.0120595
HYOU1 hypoxia up-regulated 1 0.0117865
TOP1 topoisomerase (DNA) I 0.0117118
ATF3 activating transcription factor 3 0.0116945
NSUN6 NOP2/Sun domain family, member 6 0.0116906
SMAP2 small ArfGAP2 0.0116716
COL6A1 collagen, type VI, alpha 1 0.0116664
SNAPC1 small nuclear RNA activating complex, polypeptide 1, 43kDa 0.0115479
COL27A1 collagen, type XXVII, alpha 1 0.0115024
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0114681
LNPK lunapark, ER junction formation factor 0.0114139
CCNL1 cyclin L1 0.0113738
RNF213 ring finger protein 213 0.0113619
RPS12 ribosomal protein S12 0.0112916
HELZ helicase with zinc finger 0.0111299
KDM5B lysine (K)-specific demethylase 5B 0.0111272
FBXO22 F-box protein 22 0.0110915
PKM pyruvate kinase, muscle 0.0109191
CDK19 cyclin-dependent kinase 19 0.0108605
E2F7 E2F transcription factor 7 0.0108382
PDIA6 protein disulfide isomerase family A, member 6 0.0107545
RPS3 ribosomal protein S3 0.0107006
DGKH diacylglycerol kinase, eta 0.0106305
CCT7 chaperonin containing TCP1, subunit 7 (eta) 0.0105313
TIGAR TP53 induced glycolysis regulatory phosphatase 0.0104901
TSGA10 testis specific, 10 0.0104646
FLNC filamin C, gamma 0.0104411
EEF1D eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) 0.0104034
SECISBP2 SECIS binding protein 2 0.0102832
CDPF1 cysteine-rich, DPF motif domain containing 1 0.0102773
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b 0.0102085
ANXA4 annexin A4 0.0100901

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.393976
EXT1 exostosin glycosyltransferase 1 -0.107622
EFNA5 ephrin-A5 -0.103062
ACTG1 actin gamma 1 -0.0895465
GPC6 glypican 6 -0.0863542
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.082861
DTNA dystrobrevin, alpha -0.081303
ASPH aspartate beta-hydroxylase -0.0775022
USP34 ubiquitin specific peptidase 34 -0.0739198
PLEKHA5 pleckstrin homology domain containing, family A member 5 -0.0682098
PRKG1 protein kinase, cGMP-dependent, type I -0.0605762
JMJD1C jumonji domain containing 1C -0.0601613
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0591561
CALD1 caldesmon 1 -0.0580993
PTK2 protein tyrosine kinase 2 -0.0565672
TPT1 tumor protein, translationally-controlled 1 -0.0523183
RUNX1 runt-related transcription factor 1 -0.049694
RPS6 ribosomal protein S6 -0.0489734
NAV1 neuron navigator 1 -0.0475232
RTN4 reticulon 4 -0.0472376
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0458724
MCTP1 multiple C2 domains, transmembrane 1 -0.0456415
ANO6 anoctamin 6 -0.0455828
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0416281
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase -0.0413869
ALCAM activated leukocyte cell adhesion molecule -0.0409781
LDHA lactate dehydrogenase A -0.0397658
EIF1 eukaryotic translation initiation factor 1 -0.0393929
NF1 neurofibromin 1 -0.0392823
SAMD4A sterile alpha motif domain containing 4A -0.0387442
MT2A metallothionein 2A -0.0377688
SMYD3 SET and MYND domain containing 3 -0.0371926
PBX3 pre-B-cell leukemia homeobox 3 -0.0371079
SLC8A1 solute carrier family 8 (sodium/calcium exchanger), member 1 -0.0368604
SAMD3 sterile alpha motif domain containing 3 -0.0367209
RPS2 ribosomal protein S2 -0.0364718
ZEB1 zinc finger E-box binding homeobox 1 -0.036229
POTEF POTE ankyrin domain family, member F -0.0360933
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.0353006
MAML2 mastermind-like 2 (Drosophila) -0.0350833
SBF2 SET binding factor 2 -0.0345302
TRIO trio Rho guanine nucleotide exchange factor -0.034492
FNDC3B fibronectin type III domain containing 3B -0.0344339
ADAM19 ADAM metallopeptidase domain 19 -0.0341341
PTPRG protein tyrosine phosphatase, receptor type, G -0.0336988
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0334532
ERBIN erbb2 interacting protein -0.0332396
CDK6 cyclin-dependent kinase 6 -0.0331579
PICALM phosphatidylinositol binding clathrin assembly protein -0.0328323
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0327518
KIAA1549L KIAA1549-like -0.0325966
SIPA1L1 signal-induced proliferation-associated 1 like 1 -0.0325764
TMPRSS15 transmembrane protease, serine 15 -0.0324182
DPYD dihydropyrimidine dehydrogenase -0.0318973
FOXP1 forkhead box P1 -0.0315778
TXNRD1 thioredoxin reductase 1 -0.0313509
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 -0.0311142
VPS13B vacuolar protein sorting 13 homolog B (yeast) -0.0303944
FTL ferritin, light polypeptide -0.0303227
TAS2R14 taste receptor, type 2, member 14 -0.0301669
FRMD6 FERM domain containing 6 -0.030004
BRD2 bromodomain containing 2 -0.029638
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 -0.0294535
MAP3K20 mitogen-activated protein kinase kinase kinase 20 -0.0294366
ZNF292 zinc finger protein 292 -0.0293658
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0292195
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0286931
ANKRD28 ankyrin repeat domain 28 -0.0285434
ELL2 elongation factor, RNA polymerase II, 2 -0.0285331
OSBPL8 oxysterol binding protein-like 8 -0.0283809
BRIP1 BRCA1 interacting protein C-terminal helicase 1 -0.0282753
RPS25 ribosomal protein S25 -0.0282521
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 -0.028224
LIMS1 LIM and senescent cell antigen-like domains 1 -0.0281533
TM4SF1 transmembrane 4 L six family member 1 -0.0280245
SLC38A2 solute carrier family 38, member 2 -0.0279982
DLG1 discs, large homolog 1 (Drosophila) -0.0278093
CD44 CD44 molecule (Indian blood group) -0.0276815
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme -0.0276472
AKAP12 A kinase (PRKA) anchor protein 12 -0.0274096
TXNIP thioredoxin interacting protein -0.0269539
RPS23 ribosomal protein S23 -0.0268606
MACF1 microtubule-actin crosslinking factor 1 -0.0268046
BIRC6 baculoviral IAP repeat containing 6 -0.0267209
BCAR3 breast cancer anti-estrogen resistance 3 -0.0259636
SP100 SP100 nuclear antigen -0.0259295
NABP1 nucleic acid binding protein 1 -0.0257234
CFAP251 cilia and flagella associated protein 251 -0.0256334
AKT3 v-akt murine thymoma viral oncogene homolog 3 -0.0255442
VCL vinculin -0.0255182
ATXN1 ataxin 1 -0.0251485
RPL38 ribosomal protein L38 -0.0251271
NBAS neuroblastoma amplified sequence -0.025118
VIM vimentin -0.0251031
CCDC91 coiled-coil domain containing 91 -0.0250075
PTPRD protein tyrosine phosphatase, receptor type, D -0.0249445
ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase -0.0243642
ANKRD12 ankyrin repeat domain 12 -0.0242197
DST dystonin -0.0242019
BPTF bromodomain PHD finger transcription factor -0.0240833