Doxorubicin (hydrochloride)_NCI-H2122 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Doxorubicin (hydrochloride) perturbation in NCI-H2122 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Doxorubicin (hydrochloride)_NCI-H2122 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
NDRG1 N-myc downstream regulated 1 0.1276
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.094389
EGFR epidermal growth factor receptor 0.0708443
HELZ helicase with zinc finger 0.0707205
GOLGA4 golgin A4 0.0661073
CDC42BPA CDC42 binding protein kinase alpha (DMPK-like) 0.0638421
RNF149 ring finger protein 149 0.0616848
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0614293
KANSL1 KAT8 regulatory NSL complex subunit 1 0.0593766
LAMB3 laminin, beta 3 0.0582987
CTBP2 C-terminal binding protein 2 0.0568375
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0561397
SEPTIN2 septin 2 0.0548322
SETD5 SET domain containing 5 0.0526398
COG5 component of oligomeric golgi complex 5 0.0524314
TMEM65 transmembrane protein 65 0.0522894
PGM3 phosphoglucomutase 3 0.0522388
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0517827
PPP6R3 protein phosphatase 6, regulatory subunit 3 0.0514172
ANO6 anoctamin 6 0.0511707
MT2A metallothionein 2A 0.0511111
DENND4C DENN/MADD domain containing 4C 0.0509186
PNISR PNN-interacting serine/arginine-rich protein 0.0499679
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0495551
KDM6A lysine (K)-specific demethylase 6A 0.0493523
SMAD3 SMAD family member 3 0.0488357
CA12 carbonic anhydrase XII 0.0475812
NAMPT nicotinamide phosphoribosyltransferase 0.0467921
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 0.0467141
EEF2 eukaryotic translation elongation factor 2 0.0463735
SEC63 SEC63 homolog (S. cerevisiae) 0.0455524
NCOR1 nuclear receptor corepressor 1 0.0449692
NCOA3 nuclear receptor coactivator 3 0.0447522
PYGB phosphorylase, glycogen; brain 0.044502
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0442424
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.0436423
TAS2R14 taste receptor, type 2, member 14 0.0431972
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0424105
ANKRD11 ankyrin repeat domain 11 0.0423168
POTEF POTE ankyrin domain family, member F 0.0416592
PCBP2 poly(rC) binding protein 2 0.0415872
RNMT RNA (guanine-7-) methyltransferase 0.0410955
SRP54 signal recognition particle 54kDa 0.0407523
SMYD3 SET and MYND domain containing 3 0.0399715
HDLBP high density lipoprotein binding protein 0.0399052
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0394809
NAP1L1 nucleosome assembly protein 1-like 1 0.0392141
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0389501
ANKRD17 ankyrin repeat domain 17 0.038499
SLTM SAFB-like, transcription modulator 0.0382985
ITSN1 intersectin 1 (SH3 domain protein) 0.0379004
SRRM2 serine/arginine repetitive matrix 2 0.0378308
APOLD1 apolipoprotein L domain containing 1 0.0377616
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.036894
AKAP9 A kinase (PRKA) anchor protein 9 0.0361147
RBM25 RNA binding motif protein 25 0.0358771
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta 0.035386
BBX bobby sox homolog (Drosophila) 0.0342104
RPL11 ribosomal protein L11 0.0337067
OGA O-GlcNAcase 0.033477
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0325328
TTC3 tetratricopeptide repeat domain 3 0.0325058
WDFY3 WD repeat and FYVE domain containing 3 0.0323883
HOOK2 hook microtubule-tethering protein 2 0.0322723
TMF1 TATA element modulatory factor 1 0.0321323
SPAG9 sperm associated antigen 9 0.0319484
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0311776
GLS2 glutaminase 2 (liver, mitochondrial) 0.0311188
AP2B1 adaptor-related protein complex 2, beta 1 subunit 0.0311028
GARS1 glycyl-tRNA synthetase 1 0.0310565
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0306749
CTNND1 catenin (cadherin-associated protein), delta 1 0.0306005
LOXL2 lysyl oxidase-like 2 0.030444
PDE10A phosphodiesterase 10A 0.0303067
FNDC3B fibronectin type III domain containing 3B 0.0301921
TRA2A transformer 2 alpha homolog (Drosophila) 0.0298608
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 0.0297419
RPL23 ribosomal protein L23 0.0287966
PRRC2B proline-rich coiled-coil 2B 0.0287961
CALR calreticulin 0.02879
RPS16 ribosomal protein S16 0.0286426
ZFAND3 zinc finger, AN1-type domain 3 0.0284876
PTPRJ protein tyrosine phosphatase, receptor type, J 0.0283378
RPL31 ribosomal protein L31 0.0276766
B2M beta-2-microglobulin 0.0276287
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0269467
RASA2 RAS p21 protein activator 2 0.0269405
RUNX1 runt-related transcription factor 1 0.0265594
FBF1 Fas (TNFRSF6) binding factor 1 0.0265266
TNFAIP8 tumor necrosis factor, alpha-induced protein 8 0.0264478
PTBP2 polypyrimidine tract binding protein 2 0.0264402
NALF1 NALCN channel auxiliary factor 1 0.0263153
DLG1 discs, large homolog 1 (Drosophila) 0.0258438
KMT2E lysine (K)-specific methyltransferase 2E 0.0251448
RPS11 ribosomal protein S11 0.0250899
DOCK5 dedicator of cytokinesis 5 0.0247074
EIF4A1 eukaryotic translation initiation factor 4A1 0.0246342
COPB2 coatomer protein complex, subunit beta 2 (beta prime) 0.0244423
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0237997
SLC39A11 solute carrier family 39, member 11 0.0237398

decreased expression

Symbol Name Standardized Value
PDE4D phosphodiesterase 4D, cAMP-specific -0.178224
LMO7 LIM domain 7 -0.147908
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.134453
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.126426
FN1 fibronectin 1 -0.106762
S100A9 S100 calcium binding protein A9 -0.104347
DSCAM Down syndrome cell adhesion molecule -0.102509
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0890464
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0865153
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0857814
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0821142
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0784543
AKAP12 A kinase (PRKA) anchor protein 12 -0.0731433
SEC31A SEC31 homolog A (S. cerevisiae) -0.0719156
ATOSA atos homolog A -0.0695669
MAML3 mastermind-like 3 (Drosophila) -0.0638024
NKD1 naked cuticle homolog 1 (Drosophila) -0.0631505
ASPH aspartate beta-hydroxylase -0.0623002
KYNU kynureninase -0.0620123
ZMYND8 zinc finger, MYND-type containing 8 -0.0602808
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0598206
RICTOR RPTOR independent companion of MTOR, complex 2 -0.0592693
ABHD17C abhydrolase domain containing 17C -0.0592607
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0592155
JMJD1C jumonji domain containing 1C -0.0587725
EXT1 exostosin glycosyltransferase 1 -0.0584513
UGCG UDP-glucose ceramide glucosyltransferase -0.0572824
THBS1 thrombospondin 1 -0.0551272
MAML2 mastermind-like 2 (Drosophila) -0.0540453
PLAUR plasminogen activator, urokinase receptor -0.0534761
TM4SF1 transmembrane 4 L six family member 1 -0.052725
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) -0.0524926
INHBA inhibin, beta A -0.0519984
BZW1 basic leucine zipper and W2 domains 1 -0.0516485
CEACAM6 carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen) -0.0507864
TMSB10 thymosin beta 10 -0.0500439
NIPBL Nipped-B homolog (Drosophila) -0.0485985
TPT1 tumor protein, translationally-controlled 1 -0.0484411
RAI14 retinoic acid induced 14 -0.0483191
VCL vinculin -0.047183
RBM47 RNA binding motif protein 47 -0.0465869
SLC38A2 solute carrier family 38, member 2 -0.0460412
STC1 stanniocalcin 1 -0.0459249
KMT2C lysine (K)-specific methyltransferase 2C -0.0459117
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.0446049
VIM vimentin -0.0442251
MAST4 microtubule associated serine/threonine kinase family member 4 -0.0437
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0436536
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.04202
SIPA1L1 signal-induced proliferation-associated 1 like 1 -0.0418896
TPM4 tropomyosin 4 -0.0408598
EZR ezrin -0.0408109
TRIO trio Rho guanine nucleotide exchange factor -0.0402918
GOLGB1 golgin B1 -0.0394978
KATNBL1 katanin p80 subunit B-like 1 -0.0393067
ELL2 elongation factor, RNA polymerase II, 2 -0.0391108
KRT17 keratin 17, type I -0.0385339
PSD3 pleckstrin and Sec7 domain containing 3 -0.0380207
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase -0.0376668
BACE2 beta-site APP-cleaving enzyme 2 -0.0369489
SIK3 SIK family kinase 3 -0.0352557
MYO1E myosin IE -0.0340453
BRIP1 BRCA1 interacting protein C-terminal helicase 1 -0.0340044
RAB11FIP1 RAB11 family interacting protein 1 (class I) -0.0339536
CD44 CD44 molecule (Indian blood group) -0.0339353
CLIP1 CAP-GLY domain containing linker protein 1 -0.0339234
ZBTB20 zinc finger and BTB domain containing 20 -0.0328843
PGK1 phosphoglycerate kinase 1 -0.0328467
F3 coagulation factor III (thromboplastin, tissue factor) -0.0324543
EFNA5 ephrin-A5 -0.0324236
BIRC6 baculoviral IAP repeat containing 6 -0.0314695
MED13L mediator complex subunit 13-like -0.0306866
NPEPPS aminopeptidase puromycin sensitive -0.0304544
SMURF1 SMAD specific E3 ubiquitin protein ligase 1 -0.0301779
GNAS GNAS complex locus -0.0291873
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.0291136
MYCBP2 MYC binding protein 2, E3 ubiquitin protein ligase -0.0283975
SAMD4A sterile alpha motif domain containing 4A -0.0283471
SOS1 son of sevenless homolog 1 (Drosophila) -0.0282811
ADNP activity-dependent neuroprotector homeobox -0.028009
NT5C2 5'-nucleotidase, cytosolic II -0.0275457
ENO1 enolase 1, (alpha) -0.02752
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0269812
ANKRD12 ankyrin repeat domain 12 -0.0267175
TXNIP thioredoxin interacting protein -0.0265138
CSNK1A1 casein kinase 1, alpha 1 -0.0262703
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0261074
SLC38A1 solute carrier family 38, member 1 -0.025798
TJP1 tight junction protein 1 -0.0251012
RAB10 RAB10, member RAS oncogene family -0.0249841
GLIS3 GLIS family zinc finger 3 -0.0246411
RPS8 ribosomal protein S8 -0.0246295
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0244027
FTH1 ferritin, heavy polypeptide 1 -0.024184
ARHGAP5 Rho GTPase activating protein 5 -0.0237917
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0235161
S100A10 S100 calcium binding protein A10 -0.0232401
ERRFI1 ERBB receptor feedback inhibitor 1 -0.023205
RBM39 RNA binding motif protein 39 -0.0227509
ANXA2 annexin A2 -0.0224367