Doxorubicin (hydrochloride)_NCI-H2347 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Doxorubicin (hydrochloride) perturbation in NCI-H2347 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Doxorubicin (hydrochloride)_NCI-H2347 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
EEF2 eukaryotic translation elongation factor 2 0.0940952
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0937827
FN1 fibronectin 1 0.0891039
PCBP2 poly(rC) binding protein 2 0.0806656
CCNL1 cyclin L1 0.0778231
MYH9 myosin, heavy chain 9, non-muscle 0.0750761
VEGFA vascular endothelial growth factor A 0.0633594
ADAM9 ADAM metallopeptidase domain 9 0.0630558
APLP2 amyloid beta (A4) precursor-like protein 2 0.059412
NDRG1 N-myc downstream regulated 1 0.0570113
POTEF POTE ankyrin domain family, member F 0.0553587
TPM3 tropomyosin 3 0.0545119
MSN moesin 0.0521827
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0474875
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0440387
CALR calreticulin 0.0431375
ARRDC3 arrestin domain containing 3 0.0376608
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0366247
RPSA ribosomal protein SA 0.0355337
YTHDC1 YTH domain containing 1 0.0354172
HNRNPDL heterogeneous nuclear ribonucleoprotein D-like 0.0349836
PDIA6 protein disulfide isomerase family A, member 6 0.0334549
HDGF hepatoma-derived growth factor 0.0330689
PLAU plasminogen activator, urokinase 0.032462
PKM pyruvate kinase, muscle 0.0319621
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0305606
SUPT5H suppressor of Ty 5 homolog (S. cerevisiae) 0.029457
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0270678
NUP58 nucleoporin 58 0.027057
RNF145 ring finger protein 145 0.0267654
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0263942
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 0.0262309
UBA6 ubiquitin-like modifier activating enzyme 6 0.0262221
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0261299
CANX calnexin 0.0260151
MYO6 myosin VI 0.0260122
IRF6 interferon regulatory factor 6 0.0257502
TNIP1 TNFAIP3 interacting protein 1 0.0251327
FXR1 fragile X mental retardation, autosomal homolog 1 0.0251016
MIER1 mesoderm induction early response 1, transcriptional regulator 0.0249169
EEF1G eukaryotic translation elongation factor 1 gamma 0.023802
HNRNPM heterogeneous nuclear ribonucleoprotein M 0.0237647
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0237402
PLEC plectin 0.0235699
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 0.023479
RPL3 ribosomal protein L3 0.0233292
FLNA filamin A, alpha 0.0231418
TOP1 topoisomerase (DNA) I 0.0223254
EIF5 eukaryotic translation initiation factor 5 0.0221344
HSPA8 heat shock 70kDa protein 8 0.0220597
CNOT1 CCR4-NOT transcription complex, subunit 1 0.0215277
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0210032
NFE2L1 nuclear factor, erythroid 2-like 1 0.0206117
DHX9 DEAH (Asp-Glu-Ala-His) box helicase 9 0.0201009
DSPP dentin sialophosphoprotein 0.0197853
MCL1 myeloid cell leukemia 1 0.0195523
PDIA3 protein disulfide isomerase family A, member 3 0.0192966
SET SET nuclear proto-oncogene 0.0192258
MRPS6 mitochondrial ribosomal protein S6 0.0185342
TSPAN15 tetraspanin 15 0.0185272
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0184843
RNF213 ring finger protein 213 0.0184105
BCLAF1 BCL2-associated transcription factor 1 0.0179978
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0178573
LDHA lactate dehydrogenase A 0.0178474
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0178244
MKLN1 muskelin 1, intracellular mediator containing kelch motifs 0.0176749
PNN pinin, desmosome associated protein 0.0172399
ATP2A2 ATPase, Ca++ transporting, cardiac muscle, slow twitch 2 0.0172246
CD46 CD46 molecule, complement regulatory protein 0.0172137
SPINT1 serine peptidase inhibitor, Kunitz type 1 0.0171414
ENO2 enolase 2 (gamma, neuronal) 0.0169695
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma 0.0169414
KDM6A lysine (K)-specific demethylase 6A 0.0169219
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0169174
TMBIM6 transmembrane BAX inhibitor motif containing 6 0.0169108
NCKAP1 NCK-associated protein 1 0.0168735
DIAPH1 diaphanous-related formin 1 0.0168329
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.0166486
HNRNPA3 heterogeneous nuclear ribonucleoprotein A3 0.0157363
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.0156445
GLS2 glutaminase 2 (liver, mitochondrial) 0.0153534
POLR2B polymerase (RNA) II (DNA directed) polypeptide B, 140kDa 0.0152496
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 0.0150994
ATP5F1B ATP synthase F1 subunit beta 0.0149281
DTNA dystrobrevin, alpha 0.0148865
SRSF5 serine/arginine-rich splicing factor 5 0.0147561
ECT2 epithelial cell transforming 2 0.0146732
HSPA1B heat shock 70kDa protein 1B 0.0146029
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0145164
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0144996
HNRNPH3 heterogeneous nuclear ribonucleoprotein H3 (2H9) 0.014455
PAPOLA poly(A) polymerase alpha 0.0143339
PPP4R1 protein phosphatase 4, regulatory subunit 1 0.0143146
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0142853
APP amyloid beta (A4) precursor protein 0.0141884
XPOT exportin, tRNA 0.014051
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0136979
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 0.0135609
HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) 0.0135003

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.270989
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.198503
ACTG1 actin gamma 1 -0.195824
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.182921
FTL ferritin, light polypeptide -0.170137
TMSB10 thymosin beta 10 -0.116724
TPT1 tumor protein, translationally-controlled 1 -0.114523
PTMA prothymosin, alpha -0.0913593
S100A6 S100 calcium binding protein A6 -0.0893986
EIF1 eukaryotic translation initiation factor 1 -0.0721516
RPL35A ribosomal protein L35a -0.0713225
TM4SF1 transmembrane 4 L six family member 1 -0.0709607
SAMD4A sterile alpha motif domain containing 4A -0.0692954
RPL34 ribosomal protein L34 -0.0691914
TRIO trio Rho guanine nucleotide exchange factor -0.0677492
LAMB3 laminin, beta 3 -0.0672416
LMO7 LIM domain 7 -0.0656171
S100A10 S100 calcium binding protein A10 -0.0642334
MT2A metallothionein 2A -0.0630261
ALCAM activated leukocyte cell adhesion molecule -0.0618764
ELL2 elongation factor, RNA polymerase II, 2 -0.0609561
RPLP1 ribosomal protein, large, P1 -0.0574626
EXT1 exostosin glycosyltransferase 1 -0.0515941
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0514594
RPL23 ribosomal protein L23 -0.0492263
AHNAK AHNAK nucleoprotein -0.0477185
NPEPPS aminopeptidase puromycin sensitive -0.0467526
CD2AP CD2-associated protein -0.0463649
BASP1 brain abundant, membrane attached signal protein 1 -0.0462992
RPS8 ribosomal protein S8 -0.0460383
MBOAT2 membrane bound O-acyltransferase domain containing 2 -0.0454734
WSB1 WD repeat and SOCS box containing 1 -0.045264
RPS24 ribosomal protein S24 -0.0452231
LPP LIM domain containing preferred translocation partner in lipoma -0.0445367
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0444909
GNAS GNAS complex locus -0.0443513
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0441975
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0437206
EFNA5 ephrin-A5 -0.0422918
CSTB cystatin B (stefin B) -0.0422495
LIMCH1 LIM and calponin homology domains 1 -0.0420307
SOX4 SRY (sex determining region Y)-box 4 -0.0419683
RPS19 ribosomal protein S19 -0.0410296
C15ORF48 chromosome 15 open reading frame 48 -0.0399927
RACK1 receptor for activated C kinase 1 -0.0399824
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0398559
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0394432
ARHGAP5 Rho GTPase activating protein 5 -0.0381306
RPS23 ribosomal protein S23 -0.0380487
TMEM263 transmembrane protein 263 -0.0377092
RPL32 ribosomal protein L32 -0.0375885
CDCP1 CUB domain containing protein 1 -0.036866
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0368156
RPS29 ribosomal protein S29 -0.0366713
SMURF1 SMAD specific E3 ubiquitin protein ligase 1 -0.0365019
SDC4 syndecan 4 -0.0358344
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0356755
ISG15 ISG15 ubiquitin-like modifier -0.0354563
CTNND1 catenin (cadherin-associated protein), delta 1 -0.0348314
RPL12 ribosomal protein L12 -0.0348028
NAV2 neuron navigator 2 -0.034604
IFITM3 interferon induced transmembrane protein 3 -0.0345503
RAB1A RAB1A, member RAS oncogene family -0.0344589
LAMC2 laminin, gamma 2 -0.0342877
RPS27A ribosomal protein S27a -0.0340176
RPL30 ribosomal protein L30 -0.03391
RRBP1 ribosome binding protein 1 -0.0337814
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0337049
ESYT2 extended synaptotagmin-like protein 2 -0.0334486
LOC112694756 uncharaterized LOC112694756 -0.032943
RPLP2 ribosomal protein, large, P2 -0.03281
ARF1 ADP-ribosylation factor 1 -0.0326825
RAB11FIP1 RAB11 family interacting protein 1 (class I) -0.0326404
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0324331
LMNA lamin A/C -0.0322266
RAD21 RAD21 homolog (S. pombe) -0.0320336
IFI27 interferon, alpha-inducible protein 27 -0.0319622
RPLP0 ribosomal protein, large, P0 -0.0319621
ANXA2 annexin A2 -0.0319241
RPL11 ribosomal protein L11 -0.0318173
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0317828
RPS6 ribosomal protein S6 -0.0315765
TMSB4X thymosin beta 4, X-linked -0.0310988
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0310842
IFITM1 interferon induced transmembrane protein 1 -0.0306826
IFI6 interferon, alpha-inducible protein 6 -0.0306185
RPL19 ribosomal protein L19 -0.0304235
PLSCR1 phospholipid scramblase 1 -0.0302691
ENO1 enolase 1, (alpha) -0.0299096
RPL27A ribosomal protein L27a -0.0296493
KLF6 Kruppel-like factor 6 -0.0296121
CD63 CD63 molecule -0.0296114
IGFBP3 insulin-like growth factor binding protein 3 -0.029579
KRT7 keratin 7, type II -0.0294465
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 -0.0293911
RPL9 ribosomal protein L9 -0.029368
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0291264
NIPBL Nipped-B homolog (Drosophila) -0.0291213
RPS21 ribosomal protein S21 -0.029101
IFI16 interferon, gamma-inducible protein 16 -0.0289631