Doxycycline (monohydrate)_PANC-1 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Doxycycline (monohydrate) perturbation in PANC-1 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Doxycycline (monohydrate)_PANC-1 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.135809
TRIO trio Rho guanine nucleotide exchange factor 0.133204
FNDC3B fibronectin type III domain containing 3B 0.101857
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.0986164
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.095113
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0942911
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0913968
SPAG9 sperm associated antigen 9 0.0768134
FBL fibrillarin 0.075364
ZFP36 ZFP36 ring finger protein 0.0752297
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0750065
SUPT5H suppressor of Ty 5 homolog (S. cerevisiae) 0.0717993
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0706021
FMNL2 formin-like 2 0.0695082
SEPTIN9 septin 9 0.0640908
ZNF292 zinc finger protein 292 0.0636265
SMAD3 SMAD family member 3 0.0587891
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0582811
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0545119
APLP2 amyloid beta (A4) precursor-like protein 2 0.052697
XPO1 exportin 1 0.0523577
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase 0.0508782
ZCCHC7 zinc finger, CCHC domain containing 7 0.0495512
NAV2 neuron navigator 2 0.0495358
ENO1 enolase 1, (alpha) 0.0494844
SBF2 SET binding factor 2 0.0494621
EEPD1 endonuclease/exonuclease/phosphatase family domain containing 1 0.0488509
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.047527
USP3 ubiquitin specific peptidase 3 0.0473032
ATP13A3 ATPase type 13A3 0.0472949
MED13L mediator complex subunit 13-like 0.0472909
PDE10A phosphodiesterase 10A 0.0471946
PTK2 protein tyrosine kinase 2 0.0471924
MATR3 matrin 3 0.0467078
PKM pyruvate kinase, muscle 0.0465643
AFAP1 actin filament associated protein 1 0.0454559
PCBP2 poly(rC) binding protein 2 0.0452122
ADAM17 ADAM metallopeptidase domain 17 0.0450103
CTBP2 C-terminal binding protein 2 0.044692
GOLGA4 golgin A4 0.044004
PTPRJ protein tyrosine phosphatase, receptor type, J 0.0423892
AKT2 v-akt murine thymoma viral oncogene homolog 2 0.0419287
KDM2A lysine (K)-specific demethylase 2A 0.0415181
TSC22D2 TSC22 domain family, member 2 0.0406389
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.040393
YAP1 Yes-associated protein 1 0.040063
TFG TRK-fused gene 0.0397922
ZFAND3 zinc finger, AN1-type domain 3 0.039569
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0392477
YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta 0.0386575
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0382935
HPCAL1 hippocalcin-like 1 0.0380183
HMGA1 high mobility group AT-hook 1 0.0380125
TXNRD1 thioredoxin reductase 1 0.0379659
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0375544
BIRC6 baculoviral IAP repeat containing 6 0.0370508
NUP58 nucleoporin 58 0.0369954
FXR1 fragile X mental retardation, autosomal homolog 1 0.0364532
SDK1 sidekick cell adhesion molecule 1 0.0363933
TMEM123 transmembrane protein 123 0.0362856
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 0.0362562
BIRC2 baculoviral IAP repeat containing 2 0.0359297
ANKRD11 ankyrin repeat domain 11 0.0357271
PICALM phosphatidylinositol binding clathrin assembly protein 0.0355294
CCNL1 cyclin L1 0.0352095
KDM6A lysine (K)-specific demethylase 6A 0.0351658
SUCO SUN domain containing ossification factor 0.0350234
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0348323
CDK19 cyclin-dependent kinase 19 0.0346669
IBTK inhibitor of Bruton agammaglobulinemia tyrosine kinase 0.0342875
LDHA lactate dehydrogenase A 0.0341099
WDR43 WD repeat domain 43 0.0335218
PDIA6 protein disulfide isomerase family A, member 6 0.0334766
MSN moesin 0.0333477
POTEF POTE ankyrin domain family, member F 0.033309
ESYT2 extended synaptotagmin-like protein 2 0.0331815
KTN1 kinectin 1 (kinesin receptor) 0.0331084
KMT2E lysine (K)-specific methyltransferase 2E 0.0327996
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0326828
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0323591
RNF145 ring finger protein 145 0.0323418
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0322985
SNX14 sorting nexin 14 0.0322856
QKI QKI, KH domain containing, RNA binding 0.0316715
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0316282
PHIP pleckstrin homology domain interacting protein 0.0315903
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.031125
KMT2C lysine (K)-specific methyltransferase 2C 0.0310085
DST dystonin 0.0309785
EPB41L2 erythrocyte membrane protein band 4.1-like 2 0.0309137
OLA1 Obg-like ATPase 1 0.0308691
ARRDC3 arrestin domain containing 3 0.0304781
ARID4B AT rich interactive domain 4B (RBP1-like) 0.0304256
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0303894
SPATS2L spermatogenesis associated, serine-rich 2-like 0.029992
SEPTIN7 septin 7 0.0299112
NUP153 nucleoporin 153kDa 0.0296927
TPD52 tumor protein D52 0.0296915
CENPF centromere protein F, 350/400kDa 0.0295945
PGK1 phosphoglycerate kinase 1 0.0294384

decreased expression

Symbol Name Standardized Value
VCL vinculin -0.269302
RPS16 ribosomal protein S16 -0.115131
ZNF780B zinc finger protein 780B -0.0559719
AKAP12 A kinase (PRKA) anchor protein 12 -0.0553706
EGR1 early growth response 1 -0.0494258
RPL35A ribosomal protein L35a -0.0476553
CD44 CD44 molecule (Indian blood group) -0.0452825
VIM vimentin -0.0426019
EXT1 exostosin glycosyltransferase 1 -0.0412663
SEMA4B sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B -0.0411814
PLEKHG2 pleckstrin homology domain containing, family G (with RhoGef domain) member 2 -0.0397118
AHNAK AHNAK nucleoprotein -0.039504
RPLP2 ribosomal protein, large, P2 -0.0392168
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0381333
FHL2 four and a half LIM domains 2 -0.0363818
CARD18 caspase recruitment domain family, member 18 -0.0355855
OSMR oncostatin M receptor -0.0328479
TM4SF1 transmembrane 4 L six family member 1 -0.0327096
RPS3 ribosomal protein S3 -0.0319636
AHNAK2 AHNAK nucleoprotein 2 -0.0309324
BMAL2 basic helix-loop-helix ARNT like 2 -0.0308698
KLF6 Kruppel-like factor 6 -0.0299435
NCEH1 neutral cholesterol ester hydrolase 1 -0.0297293
MYO1E myosin IE -0.0295063
EIF1 eukaryotic translation initiation factor 1 -0.0293254
SPRED2 sprouty-related, EVH1 domain containing 2 -0.0284663
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0280683
ELL2 elongation factor, RNA polymerase II, 2 -0.0278833
RPS24 ribosomal protein S24 -0.0273308
RPS12 ribosomal protein S12 -0.0266306
RPL12 ribosomal protein L12 -0.0264659
TPT1 tumor protein, translationally-controlled 1 -0.0262163
ZBTB20 zinc finger and BTB domain containing 20 -0.0261402
NPAS2 neuronal PAS domain protein 2 -0.0255912
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.025367
RPL26 ribosomal protein L26 -0.0247728
RASAL2 RAS protein activator like 2 -0.0244035
EGFR epidermal growth factor receptor -0.0237385
PHF14 PHD finger protein 14 -0.0232563
HMGA2 high mobility group AT-hook 2 -0.023189
TPM1 tropomyosin 1 (alpha) -0.0221075
SAMD4B sterile alpha motif domain containing 4B -0.0220293
MCL1 myeloid cell leukemia 1 -0.0220042
SLC38A2 solute carrier family 38, member 2 -0.0214654
VMP1 vacuole membrane protein 1 -0.0212055
SMYD3 SET and MYND domain containing 3 -0.0209994
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0208179
RPS8 ribosomal protein S8 -0.0207337
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 -0.0207209
NABP1 nucleic acid binding protein 1 -0.0202745
NPC1 Niemann-Pick disease, type C1 -0.0200775
ASNS asparagine synthetase (glutamine-hydrolyzing) -0.0199682
MT2A metallothionein 2A -0.0199262
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0197337
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric -0.0196912
MSRB3 methionine sulfoxide reductase B3 -0.0195212
THSD4 thrombospondin, type I, domain containing 4 -0.0195043
IER3 immediate early response 3 -0.0194603
RPL37A ribosomal protein L37a -0.0194281
MED29 mediator complex subunit 29 -0.019343
SLC35F3 solute carrier family 35, member F3 -0.0191169
RSU1 Ras suppressor protein 1 -0.0190083
INTS6 integrator complex subunit 6 -0.0189037
EPAS1 endothelial PAS domain protein 1 -0.0188321
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 -0.0183469
UBASH3B ubiquitin associated and SH3 domain containing B -0.0183361
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0183007
KLF7 Kruppel-like factor 7 (ubiquitous) -0.0180194
YBX3 Y box binding protein 3 -0.0178965
MYO9A myosin IXA -0.0178366
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0177054
EHBP1 EH domain binding protein 1 -0.0176157
RPLP1 ribosomal protein, large, P1 -0.0175529
FAM120B family with sequence similarity 120B -0.0175192
SYTL2 synaptotagmin-like 2 -0.0174441
HDAC9 histone deacetylase 9 -0.0172134
CAVIN1 caveolae associated protein 1 -0.0170875
TBCA tubulin folding cofactor A -0.0169619
LOC102724023 ES1 protein homolog, mitochondrial -0.0169052
CDK13 cyclin-dependent kinase 13 -0.0167668
RPS27A ribosomal protein S27a -0.016719
DOCK1 dedicator of cytokinesis 1 -0.0166285
SYT1 synaptotagmin I -0.0163202
LIMA1 LIM domain and actin binding 1 -0.0161997
RPL36 ribosomal protein L36 -0.0161683
TMSB10 thymosin beta 10 -0.0160496
NCOA7 nuclear receptor coactivator 7 -0.0159782
STXBP5 syntaxin binding protein 5 (tomosyn) -0.0159271
ZNF546 zinc finger protein 546 -0.0158902
RPL34 ribosomal protein L34 -0.0158466
RPS25 ribosomal protein S25 -0.0158389
ZC3H12B zinc finger CCCH-type containing 12B -0.0156512
SPIDR scaffolding protein involved in DNA repair -0.0153969
PDLIM5 PDZ and LIM domain 5 -0.0153747
NFX1 nuclear transcription factor, X-box binding 1 -0.0147858
GNL3L guanine nucleotide binding protein-like 3 (nucleolar)-like -0.014763
ATM ATM serine/threonine kinase -0.0147266
RSL1D1 ribosomal L1 domain containing 1 -0.0146522
MAP3K14 mitogen-activated protein kinase kinase kinase 14 -0.0145553
TRIM66 tripartite motif containing 66 -0.0144818