Doxycycline (monohydrate)_Panc 03.27 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Doxycycline (monohydrate) perturbation in Panc 03.27 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Doxycycline (monohydrate)_Panc 03.27 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
TPT1 tumor protein, translationally-controlled 1 0.112032
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0803119
MUC4 mucin 4, cell surface associated 0.0724605
ACTG1 actin gamma 1 0.0717901
SMAD3 SMAD family member 3 0.0715875
ZFAND3 zinc finger, AN1-type domain 3 0.0678531
RPL37A ribosomal protein L37a 0.0666179
INTS6 integrator complex subunit 6 0.0661842
RPL31 ribosomal protein L31 0.0631122
LMO7 LIM domain 7 0.0624665
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 0.0529887
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0506154
DSCAM Down syndrome cell adhesion molecule 0.0489438
SAMD4A sterile alpha motif domain containing 4A 0.0484663
MYO6 myosin VI 0.0451401
RPL35A ribosomal protein L35a 0.0439907
PDLIM5 PDZ and LIM domain 5 0.043819
ZSWIM6 zinc finger, SWIM-type containing 6 0.043683
TRIO trio Rho guanine nucleotide exchange factor 0.0435875
LAMB3 laminin, beta 3 0.0431025
TJP1 tight junction protein 1 0.0424541
IGFBP3 insulin-like growth factor binding protein 3 0.0402876
RPS29 ribosomal protein S29 0.0402354
LPP LIM domain containing preferred translocation partner in lipoma 0.039984
RPS27A ribosomal protein S27a 0.03904
PPP6R3 protein phosphatase 6, regulatory subunit 3 0.0374749
RCOR1 REST corepressor 1 0.0374092
RPL37 ribosomal protein L37 0.0371409
NRIP1 nuclear receptor interacting protein 1 0.0364116
RPS23 ribosomal protein S23 0.0362004
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0361184
AFDN afadin, adherens junction formation factor 0.0354936
KRT8 keratin 8, type II 0.0354002
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.035333
RPS10 ribosomal protein S10 0.0351911
KRT17 keratin 17, type I 0.0348988
GSK3B glycogen synthase kinase 3 beta 0.0344159
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0341914
UBE2E2 ubiquitin-conjugating enzyme E2E 2 0.0339545
WAC WW domain containing adaptor with coiled-coil 0.0337744
GMDS GDP-mannose 4,6-dehydratase 0.0329473
LAMC2 laminin, gamma 2 0.0326014
MYO5B myosin VB 0.0325815
GULP1 GULP, engulfment adaptor PTB domain containing 1 0.0325381
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0324156
KPNA1 karyopherin alpha 1 (importin alpha 5) 0.0323527
SPAG9 sperm associated antigen 9 0.0322577
AKT3 v-akt murine thymoma viral oncogene homolog 3 0.0321774
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0315871
ADAMTS9 ADAM metallopeptidase with thrombospondin type 1 motif, 9 0.0313363
BRD2 bromodomain containing 2 0.0312484
RPS17 ribosomal protein S17 0.0307948
FMNL2 formin-like 2 0.0307265
HDAC9 histone deacetylase 9 0.0306639
KDM6A lysine (K)-specific demethylase 6A 0.0306233
EXT1 exostosin glycosyltransferase 1 0.0305127
RPL13A ribosomal protein L13a 0.0304174
ACTN4 actinin, alpha 4 0.0303405
TNIP1 TNFAIP3 interacting protein 1 0.0301319
RPS12 ribosomal protein S12 0.0300342
ERBIN erbb2 interacting protein 0.0294559
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.029255
RPS8 ribosomal protein S8 0.0290626
SENP5 SUMO1/sentrin specific peptidase 5 0.0290205
PARD3 par-3 family cell polarity regulator 0.0287799
CLIP4 CAP-GLY domain containing linker protein family, member 4 0.0285174
RYK receptor-like tyrosine kinase 0.0285102
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0282582
SLCO3A1 solute carrier organic anion transporter family, member 3A1 0.0278432
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0276412
KLF5 Kruppel-like factor 5 (intestinal) 0.0276147
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.027184
CASK calcium/calmodulin-dependent serine protein kinase (MAGUK family) 0.0270569
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0269908
JARID2 jumonji, AT rich interactive domain 2 0.0266892
MACF1 microtubule-actin crosslinking factor 1 0.0263915
GPHN gephyrin 0.02623
RPS6 ribosomal protein S6 0.0261745
USP12 ubiquitin specific peptidase 12 0.026155
TIMP2 TIMP metallopeptidase inhibitor 2 0.0261375
PPP4R2 protein phosphatase 4, regulatory subunit 2 0.0261311
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 0.0260024
RPS13 ribosomal protein S13 0.0258202
FUT8 fucosyltransferase 8 (alpha (1,6) fucosyltransferase) 0.0249517
PATJ PATJ crumbs cell polarity complex component 0.0248291
EPS8 epidermal growth factor receptor pathway substrate 8 0.0248243
TRAF3 TNF receptor-associated factor 3 0.0247568
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0247241
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0247217
BTBD9 BTB (POZ) domain containing 9 0.0247101
KYNU kynureninase 0.024619
ANKHD1 ankyrin repeat and KH domain containing 1 0.024574
CSNK1A1 casein kinase 1, alpha 1 0.0245603
FRMD6 FERM domain containing 6 0.0245541
SENP6 SUMO1/sentrin specific peptidase 6 0.0243711
TTC17 tetratricopeptide repeat domain 17 0.0243698
BCAR3 breast cancer anti-estrogen resistance 3 0.0242627
ANKRD17 ankyrin repeat domain 17 0.0239079
ATP13A3 ATPase type 13A3 0.0239049
PPP2R5E protein phosphatase 2, regulatory subunit B', epsilon isoform 0.0236184

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.349034
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.153127
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.141557
KRT19 keratin 19, type I -0.118127
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0964293
TOP2A topoisomerase (DNA) II alpha 170kDa -0.090999
TXNIP thioredoxin interacting protein -0.0876822
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0658007
MT2A metallothionein 2A -0.0630603
LY6E lymphocyte antigen 6 complex, locus E -0.0624717
EZR ezrin -0.0624121
NDRG1 N-myc downstream regulated 1 -0.0612115
MKI67 marker of proliferation Ki-67 -0.0574047
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0566218
FOSL1 FOS-like antigen 1 -0.056369
TMSB4X thymosin beta 4, X-linked -0.056237
EMP1 epithelial membrane protein 1 -0.055415
IFI27 interferon, alpha-inducible protein 27 -0.0539447
LDHA lactate dehydrogenase A -0.0538987
LOC102724023 ES1 protein homolog, mitochondrial -0.0538018
TMSB10 thymosin beta 10 -0.0535665
SMC4 structural maintenance of chromosomes 4 -0.0532878
CDCP1 CUB domain containing protein 1 -0.0523707
DSG2 desmoglein 2 -0.0518772
FOS FBJ murine osteosarcoma viral oncogene homolog -0.0514777
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0488034
TPI1 triosephosphate isomerase 1 -0.0487589
CENPF centromere protein F, 350/400kDa -0.0485996
PGK1 phosphoglycerate kinase 1 -0.0481193
S100A6 S100 calcium binding protein A6 -0.0473933
TMEM123 transmembrane protein 123 -0.0465249
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 -0.0444386
EGR1 early growth response 1 -0.0439907
AHNAK AHNAK nucleoprotein -0.0434409
ERC2 ELKS/RAB6-interacting/CAST family member 2 -0.0429531
LOC112694756 uncharaterized LOC112694756 -0.0425725
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0417862
NPEPPS aminopeptidase puromycin sensitive -0.0415589
ANLN anillin, actin binding protein -0.0402703
YBX3 Y box binding protein 3 -0.0401719
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.039798
PDIA3 protein disulfide isomerase family A, member 3 -0.038598
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0377139
B2M beta-2-microglobulin -0.0372677
LAMA4 laminin, alpha 4 -0.0371767
H1-0 H1.0 linker histone -0.0371434
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0362164
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0360728
MT1X metallothionein 1X -0.035686
CBX3 chromobox homolog 3 -0.0353846
CANX calnexin -0.0341754
HMGA1 high mobility group AT-hook 1 -0.0336311
VIM vimentin -0.0334935
IRS2 insulin receptor substrate 2 -0.0322731
NAMPT nicotinamide phosphoribosyltransferase -0.0313687
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0303964
ANXA2 annexin A2 -0.0299314
RPLP1 ribosomal protein, large, P1 -0.0295838
ANXA1 annexin A1 -0.0294567
CLMN calmin (calponin-like, transmembrane) -0.0291607
C15ORF48 chromosome 15 open reading frame 48 -0.0284942
ENO1 enolase 1, (alpha) -0.0280027
IFI16 interferon, gamma-inducible protein 16 -0.0279224
HMGB2 high mobility group box 2 -0.0278239
PPDPF pancreatic progenitor cell differentiation and proliferation factor -0.0273142
RNF19A ring finger protein 19A, RBR E3 ubiquitin protein ligase -0.0268257
S100A9 S100 calcium binding protein A9 -0.0267378
EPCAM epithelial cell adhesion molecule -0.0266673
RPL18 ribosomal protein L18 -0.0259237
MYL12B myosin, light chain 12B, regulatory -0.0257901
PARP4 poly (ADP-ribose) polymerase family, member 4 -0.0253729
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0253062
KRT18 keratin 18, type I -0.0252204
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0251058
S100A10 S100 calcium binding protein A10 -0.0245705
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0242159
RRBP1 ribosome binding protein 1 -0.0237842
EHF ets homologous factor -0.0237804
ITGA6 integrin, alpha 6 -0.0237529
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa -0.0234831
ELF3 E74-like factor 3 (ets domain transcription factor, epithelial-specific ) -0.0234649
PTBP3 polypyrimidine tract binding protein 3 -0.0233963
PKM pyruvate kinase, muscle -0.023386
TNFRSF10D tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain -0.023376
STK17B serine/threonine kinase 17b -0.0232091
IFITM1 interferon induced transmembrane protein 1 -0.0230066
PCLO piccolo presynaptic cytomatrix protein -0.0222248
ESRP1 epithelial splicing regulatory protein 1 -0.021985
IFITM3 interferon induced transmembrane protein 3 -0.0219083
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0216969
CCNI cyclin I -0.0216701
H3-3B H3.3 histone B -0.0216053
PDIA4 protein disulfide isomerase family A, member 4 -0.0214573
NRP1 neuropilin 1 -0.0212157
MAL2 mal, T-cell differentiation protein 2 (gene/pseudogene) -0.020686
CALU calumenin -0.0202122
PLAT plasminogen activator, tissue -0.0200722
DIAPH3 diaphanous-related formin 3 -0.020046
NFIB nuclear factor I/B -0.0199815
LMAN1 lectin, mannose-binding, 1 -0.0199531