EB1 Gene Set

Dataset CCLE Cell Line Gene CNV Profiles
Category genomics
Type cell line
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Genes

106 genes with high or low copy number in EB1 relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.

high copy number

Symbol Name Standardized Value
SLC37A2 solute carrier family 37 (glucose-6-phosphate transporter), member 2 2.85418
WDR60 WD repeat domain 60 2.58639
THOC3 THO complex 3 1.93386
LOC285074 anaphase promoting complex subunit 1 pseudogene 1.87724
CRYBB2P1 crystallin, beta B2 pseudogene 1 1.79005
LRP5L low density lipoprotein receptor-related protein 5-like 1.69166
FOXD4L5 forkhead box D4-like 5 1.40594
CHRNA7 cholinergic receptor, nicotinic, alpha 7 (neuronal) 1.38964
FOXD4L3 forkhead box D4-like 3 1.36764
CCND2 cyclin D2 1.35339
CBWD5 COBW domain containing 5 1.3385

low copy number

Symbol Name Standardized Value
NAMPT nicotinamide phosphoribosyltransferase -3.17835
POLA1 polymerase (DNA directed), alpha 1, catalytic subunit -2.59447
CENPC centromere protein C -2.58559
ABI3BP ABI family, member 3 (NESH) binding protein -2.55718
ENTPD3 ectonucleoside triphosphate diphosphohydrolase 3 -2.51113
CLEC18B C-type lectin domain family 18, member B -2.42688
ADAM6 ADAM metallopeptidase domain 6 (pseudogene) -2.40685
DNAH5 dynein, axonemal, heavy chain 5 -2.35143
ABCC1 ATP-binding cassette, sub-family C (CFTR/MRP), member 1 -2.35122
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 -2.32567
NDNF neuron-derived neurotrophic factor -2.32358
NOMO2 NODAL modulator 2 -2.29735
MIR3150B microRNA 3150b -2.28223
MIR3150A microRNA 3150a -2.28223
ENTPD3-AS1 ENTPD3 antisense RNA 1 -2.26548
TTTY22 testis-specific transcript, Y-linked 22 (non-protein coding) -2.24321
TOMM20 translocase of outer mitochondrial membrane 20 homolog (yeast) -2.21935
SNORA14B small nucleolar RNA, H/ACA box 14B -2.21931
LINC00469 long intergenic non-protein coding RNA 469 -2.17935
ANO4 anoctamin 4 -2.14778
CGNL1 cingulin-like 1 -2.13922
KLHL7-AS1 KLHL7 antisense RNA 1 (head to head) -2.09824
TPP2 tripeptidyl peptidase II -2.06639
ABCC6P1 ATP-binding cassette, sub-family C, member 6 pseudogene 1 (functional) -2.04634
BRCA2 breast cancer 2, early onset -1.99188
DAP3 death associated protein 3 -1.95466
MSTO2P misato family member 2, pseudogene -1.95449
CLVS1 clavesin 1 -1.91939
FGF1 fibroblast growth factor 1 (acidic) -1.91308
ANKRD31 ankyrin repeat domain 31 -1.85667
RPL24 ribosomal protein L24 -1.85259
LOC642361 uncharacterized LOC642361 -1.84732
TTTY20 testis-specific transcript, Y-linked 20 (non-protein coding) -1.83449
TSPY8 testis specific protein, Y-linked 8 -1.83449
TSPY1 testis specific protein, Y-linked 1 -1.83449
GPR158 G protein-coupled receptor 158 -1.82943
FAM197Y5 family with sequence similarity 197, Y-linked, member 5, pseudogene -1.81676
FAM197Y2 family with sequence similarity 197, Y-linked, member 2, pseudogene -1.81676
ANKRD30BP2 ankyrin repeat domain 30B pseudogene 2 -1.79894
KLHL6 kelch-like family member 6 -1.77586
PRB1 proline-rich protein BstNI subfamily 1 -1.77428
PKD1P1 polycystic kidney disease 1 (autosomal dominant) pseudogene 1 -1.73555
SLC25A33 solute carrier family 25 (pyrimidine nucleotide carrier), member 33 -1.70612
GRIK1-AS2 GRIK1 antisense RNA 2 -1.69511
LINC00226 long intergenic non-protein coding RNA 226 -1.68525
PRAMEF10 PRAME family member 10 -1.66574
PRAMEF4 PRAME family member 4 -1.66574
TCF7L1 transcription factor 7-like 1 (T-cell specific, HMG-box) -1.66543
ELOVL6 ELOVL fatty acid elongase 6 -1.66168
PSG1 pregnancy specific beta-1-glycoprotein 1 -1.66166
TSPY4 testis specific protein, Y-linked 4 -1.65787
TSPY3 testis specific protein, Y-linked 3 -1.65787
KIAA0125 KIAA0125 -1.65445
PSG11 pregnancy specific beta-1-glycoprotein 11 -1.64583
STARD4-AS1 STARD4 antisense RNA 1 -1.63549
PSG10P pregnancy specific beta-1-glycoprotein 10, pseudogene -1.63334
PSG2 pregnancy specific beta-1-glycoprotein 2 -1.62971
MYO3A myosin IIIA -1.62639
PSG7 pregnancy specific beta-1-glycoprotein 7 (gene/pseudogene) -1.62635
PSG6 pregnancy specific beta-1-glycoprotein 6 -1.62627
LOC100289650 uncharacterized LOC100289650 -1.59978
CLCC1 chloride channel CLIC-like 1 -1.5957
UTRN utrophin -1.59348
UGT2B28 UDP glucuronosyltransferase 2 family, polypeptide B28 -1.59111
GRIK1 glutamate receptor, ionotropic, kainate 1 -1.58971
TTTY13 testis-specific transcript, Y-linked 13 (non-protein coding) -1.58512
TRIO trio Rho guanine nucleotide exchange factor -1.57622
RPL23AP7 ribosomal protein L23a pseudogene 7 -1.56574
NOMO3 NODAL modulator 3 -1.55931
DSG3 desmoglein 3 -1.53903
FGF14 fibroblast growth factor 14 -1.53081
PSG5 pregnancy specific beta-1-glycoprotein 5 -1.52838
PGR progesterone receptor -1.50273
PDPR pyruvate dehydrogenase phosphatase regulatory subunit -1.49478
DAZ1 deleted in azoospermia 1 -1.48829
ZNF280A zinc finger protein 280A -1.47708
ZNF280B zinc finger protein 280B -1.47688
LOC648691 -1.4708
PRAME preferentially expressed antigen in melanoma -1.4708
POM121L1P POM121 transmembrane nucleoporin-like 1, pseudogene -1.44731
GGTLC2 gamma-glutamyltransferase light chain 2 -1.44731
KIF1B kinesin family member 1B -1.42737
LOC728554 THO complex 3 pseudogene -1.41908
GRIK4 glutamate receptor, ionotropic, kainate 4 -1.41737
ZFY zinc finger protein, Y-linked -1.37866
SRY sex determining region Y -1.37179
XGY2 Xg pseudogene, Y-linked 2 -1.37179
NELL1 NEL-like 1 (chicken) -1.36231
CADM2 cell adhesion molecule 2 -1.35484
PCDH11X protocadherin 11 X-linked -1.34683
RPS4Y1 ribosomal protein S4, Y-linked 1 -1.34158
PCYT1B phosphate cytidylyltransferase 1, choline, beta -1.32952
PRKY protein kinase, Y-linked, pseudogene -1.32614
AMELY amelogenin, Y-linked -1.32569
LINC00278 long intergenic non-protein coding RNA 278 -1.32056