EPLC-272H Gene Set

Dataset Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Mutation Profiles
Category genomics
Type cell line
Description disease: carcinoma, epidermoid (Cell Line Ontology, CLO_0002942)
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Genes

163 genes mutated in the EPLC-272H cell line from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Mutation Profiles dataset.

Symbol Name
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1
ABCA3 ATP-binding cassette, sub-family A (ABC1), member 3
ABCC5 ATP-binding cassette, sub-family C (CFTR/MRP), member 5
ABHD5 abhydrolase domain containing 5
ACAD8 acyl-CoA dehydrogenase family, member 8
ACOXL acyl-CoA oxidase-like
ADAM12 ADAM metallopeptidase domain 12
ADCY3 adenylate cyclase 3
AJUBA ajuba LIM protein
AKAP9 A kinase (PRKA) anchor protein 9
ALDH1L2 aldehyde dehydrogenase 1 family, member L2
ALPPL2 alkaline phosphatase, placental-like 2
ANKRD54 ankyrin repeat domain 54
AP1B1 adaptor-related protein complex 1, beta 1 subunit
AP3D1 adaptor-related protein complex 3, delta 1 subunit
APP amyloid beta (A4) precursor protein
ARHGAP32 Rho GTPase activating protein 32
ARHGAP39 Rho GTPase activating protein 39
ARHGEF3 Rho guanine nucleotide exchange factor (GEF) 3
ARID2 AT rich interactive domain 2 (ARID, RFX-like)
ARID4B AT rich interactive domain 4B (RBP1-like)
ASB3 ankyrin repeat and SOCS box containing 3
ATP6V0A1 ATPase, H+ transporting, lysosomal V0 subunit a1
BCCIP BRCA2 and CDKN1A interacting protein
BIRC6 baculoviral IAP repeat containing 6
BRD7 bromodomain containing 7
C11ORF80 chromosome 11 open reading frame 80
C2ORF69 chromosome 2 open reading frame 69
C3ORF67 chromosome 3 open reading frame 67
C7ORF31 chromosome 7 open reading frame 31
CAMK2D calcium/calmodulin-dependent protein kinase II delta
CC2D1A coiled-coil and C2 domain containing 1A
CCDC71L coiled-coil domain containing 71-like
CDK3 cyclin-dependent kinase 3
CDR2 cerebellar degeneration-related protein 2, 62kDa
CEP170 centrosomal protein 170kDa
CEP295 centrosomal protein 295kDa
CHD8 chromodomain helicase DNA binding protein 8
CLTCL1 clathrin, heavy chain-like 1
CPOX coproporphyrinogen oxidase
CREBBP CREB binding protein
CSNK2A1 casein kinase 2, alpha 1 polypeptide
CTR9 CTR9, Paf1/RNA polymerase II complex component
DDHD1 DDHD domain containing 1
DEPDC5 DEP domain containing 5
DLG1 discs, large homolog 1 (Drosophila)
DNAJC13 DnaJ (Hsp40) homolog, subfamily C, member 13
DNER delta/notch-like EGF repeat containing
DPP9 dipeptidyl-peptidase 9
DST dystonin
EHHADH enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase
EIF2AK3 eukaryotic translation initiation factor 2-alpha kinase 3
EPRS glutamyl-prolyl-tRNA synthetase
FAM110C family with sequence similarity 110, member C
FAM167A family with sequence similarity 167, member A
FBRSL1 fibrosin-like 1
FBXO11 F-box protein 11
FGD6 FYVE, RhoGEF and PH domain containing 6
FGFRL1 fibroblast growth factor receptor-like 1
FKBP9 FK506 binding protein 9, 63 kDa
GEMIN4 gem (nuclear organelle) associated protein 4
GFM2 G elongation factor, mitochondrial 2
GOLGA1 golgin A1
GPAT2 glycerol-3-phosphate acyltransferase 2, mitochondrial
GPR75-ASB3 GPR75-ASB3 readthrough
GPRIN2 G protein regulated inducer of neurite outgrowth 2
GSKIP GSK3B interacting protein
GSN gelsolin
GZF1 GDNF-inducible zinc finger protein 1
HIST1H1C histone cluster 1, H1c
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A)
HNRNPUL2 heterogeneous nuclear ribonucleoprotein U-like 2
INADL InaD-like (Drosophila)
IQCK IQ motif containing K
IRF3 interferon regulatory factor 3
IRF6 interferon regulatory factor 6
ITPKB inositol-trisphosphate 3-kinase B
KIAA1524 KIAA1524
KIAA1715 KIAA1715
KIF4B kinesin family member 4B
KRT4 keratin 4, type II
KRT75 keratin 75, type II
KRT79 keratin 79, type II
LMO4 LIM domain only 4
LRCH4 leucine-rich repeats and calponin homology (CH) domain containing 4
LRWD1 leucine-rich repeats and WD repeat domain containing 1
MAN2A1 mannosidase, alpha, class 2A, member 1
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4
MCM3AP minichromosome maintenance complex component 3 associated protein
MICAL2 microtubule associated monooxygenase, calponin and LIM domain containing 2
MICAL3 microtubule associated monooxygenase, calponin and LIM domain containing 3
MPL MPL proto-oncogene, thrombopoietin receptor
MTA2 metastasis associated 1 family, member 2
MUC16 mucin 16, cell surface associated
MYH14 myosin, heavy chain 14, non-muscle
MYLK myosin light chain kinase
MYO1D myosin ID
MYO9A myosin IXA
NEDD8 neural precursor cell expressed, developmentally down-regulated 8
NF1 neurofibromin 1
NIPBL Nipped-B homolog (Drosophila)
PCSK1 proprotein convertase subtilisin/kexin type 1
PDXP pyridoxal (pyridoxine, vitamin B6) phosphatase
PDZD8 PDZ domain containing 8
PER3 period circadian clock 3
PIEZO1 piezo-type mechanosensitive ion channel component 1
PILRA paired immunoglobin-like type 2 receptor alpha
PLAUR plasminogen activator, urokinase receptor
PLEKHG4B pleckstrin homology domain containing, family G (with RhoGef domain) member 4B
PLEKHH3 pleckstrin homology domain containing, family H (with MyTH4 domain) member 3
PLXND1 plexin D1
PPHLN1 periphilin 1
PSME4 proteasome (prosome, macropain) activator subunit 4
RASA1 RAS p21 protein activator (GTPase activating protein) 1
RBM34 RNA binding motif protein 34
RBP4 retinol binding protein 4, plasma
REST RE1-silencing transcription factor
RFC4 replication factor C (activator 1) 4, 37kDa
RICTOR RPTOR independent companion of MTOR, complex 2
RNF224 ring finger protein 224
RRBP1 ribosome binding protein 1
RREB1 ras responsive element binding protein 1
RRNAD1 ribosomal RNA adenine dimethylase domain containing 1
RRP8 ribosomal RNA processing 8, methyltransferase, homolog (yeast)
SAR1A secretion associated, Ras related GTPase 1A
SERPINB6 serpin peptidase inhibitor, clade B (ovalbumin), member 6
SH3TC1 SH3 domain and tetratricopeptide repeats 1
SHISA8 shisa family member 8
SLC25A42 solute carrier family 25, member 42
SLC41A1 solute carrier family 41 (magnesium transporter), member 1
SLC41A2 solute carrier family 41 (magnesium transporter), member 2
SMARCA4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
SPG7 spastic paraplegia 7 (pure and complicated autosomal recessive)
STAT2 signal transducer and activator of transcription 2, 113kDa
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1
TBCE tubulin folding cofactor E
TBX18 T-box 18
TCHH trichohyalin
TDRD3 tudor domain containing 3
TIMM44 translocase of inner mitochondrial membrane 44 homolog (yeast)
TMEM184C transmembrane protein 184C
TMEM192 transmembrane protein 192
TNKS1BP1 tankyrase 1 binding protein 1, 182kDa
TNKS2 tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2
TNRC18 trinucleotide repeat containing 18
TOPBP1 topoisomerase (DNA) II binding protein 1
TP53 tumor protein p53
TPP2 tripeptidyl peptidase II
TRIB3 tribbles pseudokinase 3
TRMT2A tRNA methyltransferase 2 homolog A (S. cerevisiae)
TTC14 tetratricopeptide repeat domain 14
TTC19 tetratricopeptide repeat domain 19
TYMSOS TYMS opposite strand
UGGT2 UDP-glucose glycoprotein glucosyltransferase 2
WBP1L WW domain binding protein 1-like
YAP1 Yes-associated protein 1
ZGRF1 zinc finger, GRF-type containing 1
ZMIZ1 zinc finger, MIZ-type containing 1
ZNF470 zinc finger protein 470
ZNF564 zinc finger protein 564
ZNF678 zinc finger protein 678
ZNF7 zinc finger protein 7
ZNF720 zinc finger protein 720