ERK5-IN-2_LoVo Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description ERK5-IN-2 perturbation in LoVo cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the ERK5-IN-2_LoVo drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
EEF2 eukaryotic translation elongation factor 2 0.144527
ZSWIM6 zinc finger, SWIM-type containing 6 0.0864462
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0803903
LMO7 LIM domain 7 0.0799071
EZR ezrin 0.0765474
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0762255
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.073419
INTS6 integrator complex subunit 6 0.0713412
DSPP dentin sialophosphoprotein 0.0678186
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.0621539
PCBP2 poly(rC) binding protein 2 0.0567402
EEF1G eukaryotic translation elongation factor 1 gamma 0.0546123
RPS6 ribosomal protein S6 0.0507372
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0507259
RPL3 ribosomal protein L3 0.0504667
HSPA8 heat shock 70kDa protein 8 0.0503262
LRRC23 leucine rich repeat containing 23 0.0466578
PKM pyruvate kinase, muscle 0.0462466
ITPRID2 ITPR interacting domain containing 2 0.0458516
CATSPERB catsper channel auxiliary subunit beta 0.0435795
CTBP2 C-terminal binding protein 2 0.0434602
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0430757
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0427072
BRD2 bromodomain containing 2 0.0413039
FRMD5 FERM domain containing 5 0.0384437
RPS12 ribosomal protein S12 0.0378228
ESYT2 extended synaptotagmin-like protein 2 0.0372628
LDHA lactate dehydrogenase A 0.0368518
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 0.0352277
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 0.0348353
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0346478
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0339828
MPRIP myosin phosphatase Rho interacting protein 0.0323995
RPS18 ribosomal protein S18 0.031247
RIMKLB ribosomal modification protein rimK-like family member B 0.0311315
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0310181
LGR5 leucine-rich repeat containing G protein-coupled receptor 5 0.0309819
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0307382
OXSR1 oxidative stress responsive 1 0.0299979
MYH14 myosin, heavy chain 14, non-muscle 0.029825
MYO5B myosin VB 0.0296546
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0288743
DIAPH1 diaphanous-related formin 1 0.0284603
PIK3R3 phosphoinositide-3-kinase, regulatory subunit 3 (gamma) 0.0283725
NAB1 NGFI-A binding protein 1 (EGR1 binding protein 1) 0.0282795
NABP1 nucleic acid binding protein 1 0.0282034
ARRDC3 arrestin domain containing 3 0.027089
PLK2 polo-like kinase 2 0.0270318
PABPC1 poly(A) binding protein, cytoplasmic 1 0.026892
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0268706
GNPDA1 glucosamine-6-phosphate deaminase 1 0.0267165
CFAP161 cilia and flagella associated protein 161 0.0265643
HSPH1 heat shock 105kDa/110kDa protein 1 0.0265057
PDLIM5 PDZ and LIM domain 5 0.0260615
APLP2 amyloid beta (A4) precursor-like protein 2 0.0260476
MCL1 myeloid cell leukemia 1 0.0252666
RPL21 ribosomal protein L21 0.0240627
TXNIP thioredoxin interacting protein 0.0240303
LOC105378220 macrophage receptor MARCO-like 0.0239963
SVIL supervillin 0.0237861
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0237802
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0237759
SRRM2 serine/arginine repetitive matrix 2 0.0236389
UBAP2 ubiquitin associated protein 2 0.0235201
ASPH aspartate beta-hydroxylase 0.0233582
FBXO11 F-box protein 11 0.0232936
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0229825
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.0229216
RCC1 regulator of chromosome condensation 1 0.0227674
PPARD peroxisome proliferator-activated receptor delta 0.0224297
LOC102724023 ES1 protein homolog, mitochondrial 0.0223443
RCOR1 REST corepressor 1 0.0221449
WAC WW domain containing adaptor with coiled-coil 0.0220472
SFPQ splicing factor proline/glutamine-rich 0.0219937
ZCCHC7 zinc finger, CCHC domain containing 7 0.0219549
ERRFI1 ERBB receptor feedback inhibitor 1 0.021468
FUS FUS RNA binding protein 0.0214167
EIF4A2 eukaryotic translation initiation factor 4A2 0.0213282
BZW2 basic leucine zipper and W2 domains 2 0.0211538
CEACAM5 carcinoembryonic antigen-related cell adhesion molecule 5 0.0211375
OSBPL8 oxysterol binding protein-like 8 0.021043
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 0.0209025
HNRNPDL heterogeneous nuclear ribonucleoprotein D-like 0.0208873
AEBP2 AE binding protein 2 0.0208559
SLTM SAFB-like, transcription modulator 0.0207934
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0207494
GLS2 glutaminase 2 (liver, mitochondrial) 0.0206396
KRT18 keratin 18, type I 0.0205553
TMBIM6 transmembrane BAX inhibitor motif containing 6 0.0204755
VEGFA vascular endothelial growth factor A 0.0202619
IRF1 interferon regulatory factor 1 0.0202519
MYO1E myosin IE 0.0200962
PPP6R3 protein phosphatase 6, regulatory subunit 3 0.0196568
GOLGB1 golgin B1 0.0195711
PDZD8 PDZ domain containing 8 0.019421
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0193752
SLC38A2 solute carrier family 38, member 2 0.0191603
RPL29 ribosomal protein L29 0.0191149
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0190506
TUFT1 tuftelin 1 0.018917

decreased expression

Symbol Name Standardized Value
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.182257
THSD4 thrombospondin, type I, domain containing 4 -0.122
FLNB filamin B, beta -0.120992
SLCO1B3 solute carrier organic anion transporter family, member 1B3 -0.107225
PKP2 plakophilin 2 -0.0879918
PTPRR protein tyrosine phosphatase, receptor type, R -0.0851337
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0838277
PRSS3 protease, serine, 3 -0.0835463
TXNRD1 thioredoxin reductase 1 -0.0830592
PLAC8 placenta-specific 8 -0.0823594
EPS8 epidermal growth factor receptor pathway substrate 8 -0.0760392
TRIM2 tripartite motif containing 2 -0.0681954
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0676188
ITGA6 integrin, alpha 6 -0.0672208
SHROOM3 shroom family member 3 -0.0657897
GARS1 glycyl-tRNA synthetase 1 -0.0626988
ABHD17C abhydrolase domain containing 17C -0.0623562
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0595482
FOXO1 forkhead box O1 -0.059495
PCDHB16 protocadherin beta 16 -0.0582089
MYOF myoferlin -0.0577275
VCL vinculin -0.0575615
PDE4D phosphodiesterase 4D, cAMP-specific -0.0568576
P3H2 prolyl 3-hydroxylase 2 -0.0551833
PTPRK protein tyrosine phosphatase, receptor type, K -0.0534751
RAD51B RAD51 paralog B -0.05226
KCNK1 potassium channel, two pore domain subfamily K, member 1 -0.0476491
MYO1D myosin ID -0.047472
BTBD9 BTB (POZ) domain containing 9 -0.046938
PRELID2 PRELI domain containing 2 -0.0466419
WARS1 tryptophanyl-tRNA synthetase 1 -0.0462738
UGT1A6 UDP glucuronosyltransferase 1 family, polypeptide A6 -0.046207
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0453834
FOXP1 forkhead box P1 -0.0450232
RFX3 regulatory factor X, 3 (influences HLA class II expression) -0.044155
PTPN13 protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase) -0.0439687
PTPRG protein tyrosine phosphatase, receptor type, G -0.0436162
MON2 MON2 homolog (S. cerevisiae) -0.0435634
TMSB10 thymosin beta 10 -0.0433784
RIGI RNA sensor RIG-I -0.0433578
RRBP1 ribosome binding protein 1 -0.0432958
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b -0.043102
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0425358
CDC42BPA CDC42 binding protein kinase alpha (DMPK-like) -0.041548
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0412197
ETV6 ets variant 6 -0.0412122
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) -0.0403564
CTNND1 catenin (cadherin-associated protein), delta 1 -0.0402856
FAT1 FAT atypical cadherin 1 -0.0400914
RPS24 ribosomal protein S24 -0.0400167
WWC1 WW and C2 domain containing 1 -0.039961
ETNK1 ethanolamine kinase 1 -0.0398834
BAIAP2L1 BAI1-associated protein 2-like 1 -0.0394596
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0390418
RHPN2 rhophilin, Rho GTPase binding protein 2 -0.0387234
ARHGAP29 Rho GTPase activating protein 29 -0.0386178
SH3RF2 SH3 domain containing ring finger 2 -0.0373436
KLF3 Kruppel-like factor 3 (basic) -0.0368639
MX2 MX dynamin-like GTPase 2 -0.0363729
RPLP1 ribosomal protein, large, P1 -0.0356261
PRAG1 PEAK1 related, kinase-activating pseudokinase 1 -0.0350225
BACE2 beta-site APP-cleaving enzyme 2 -0.0349527
PPARG peroxisome proliferator-activated receptor gamma -0.0346951
EREG epiregulin -0.0346282
TMTC2 transmembrane and tetratricopeptide repeat containing 2 -0.034539
SERPINB5 serpin peptidase inhibitor, clade B (ovalbumin), member 5 -0.0342844
AHCYL2 adenosylhomocysteinase-like 2 -0.0341693
RNF213 ring finger protein 213 -0.0338681
SH3RF1 SH3 domain containing ring finger 1 -0.0337413
NT5C2 5'-nucleotidase, cytosolic II -0.033685
SEPTIN10 septin 10 -0.0332815
FERMT1 fermitin family member 1 -0.0332533
EXOC4 exocyst complex component 4 -0.033232
ASNS asparagine synthetase (glutamine-hydrolyzing) -0.0330265
MX1 MX dynamin-like GTPase 1 -0.0328404
AVL9 AVL9 homolog (S. cerevisiase) -0.0321728
NOS1AP nitric oxide synthase 1 (neuronal) adaptor protein -0.0319654
FGD4 FYVE, RhoGEF and PH domain containing 4 -0.0317537
MKI67 marker of proliferation Ki-67 -0.0312797
MAML2 mastermind-like 2 (Drosophila) -0.0312647
CALB1 calbindin 1, 28kDa -0.0312335
BCL2L1 BCL2-like 1 -0.0310975
TRIM31 tripartite motif containing 31 -0.030889
FHL2 four and a half LIM domains 2 -0.0306537
TMEM45B transmembrane protein 45B -0.0305312
CXADR coxsackie virus and adenovirus receptor -0.030197
VPS37B vacuolar protein sorting 37 homolog B (S. cerevisiae) -0.030085
PAG1 phosphoprotein membrane anchor with glycosphingolipid microdomains 1 -0.030053
CSTPP1 centriolar satellite-associated tubulin polyglutamylase complex regulator 1 -0.0300073
SLC35A3 solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member A3 -0.0298595
SMYD3 SET and MYND domain containing 3 -0.0297804
CEP95 centrosomal protein 95kDa -0.0296228
RPS21 ribosomal protein S21 -0.0294509
TLN2 talin 2 -0.0284254
KLF6 Kruppel-like factor 6 -0.0282796
ZFAND3 zinc finger, AN1-type domain 3 -0.0280362
CLINT1 clathrin interactor 1 -0.0278155
CCPG1 cell cycle progression 1 -0.0276636
YBX3 Y box binding protein 3 -0.0272638
NF1 neurofibromin 1 -0.0268575