ERK5-IN-2_SK-MEL-2 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description ERK5-IN-2 perturbation in SK-MEL-2 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the ERK5-IN-2_SK-MEL-2 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FMN1 formin 1 0.0818183
VIM vimentin 0.0811819
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0788462
NAV2 neuron navigator 2 0.0758806
SFTPA2 surfactant protein A2 0.0637842
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0620004
ENO1 enolase 1, (alpha) 0.0603338
LAMP2 lysosomal-associated membrane protein 2 0.058385
LSAMP limbic system-associated membrane protein 0.0563976
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0540086
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0533027
PKM pyruvate kinase, muscle 0.0515537
FNDC3B fibronectin type III domain containing 3B 0.0500411
LDHA lactate dehydrogenase A 0.0492933
SPAG9 sperm associated antigen 9 0.0487304
PGK1 phosphoglycerate kinase 1 0.0458317
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0435083
EEF2 eukaryotic translation elongation factor 2 0.0429541
PMEL premelanosome protein 0.0402286
EIF1 eukaryotic translation initiation factor 1 0.0400946
CCND1 cyclin D1 0.0386388
MKI67 marker of proliferation Ki-67 0.0380024
SIPA1L1 signal-induced proliferation-associated 1 like 1 0.0371846
XRCC6 X-ray repair complementing defective repair in Chinese hamster cells 6 0.0370294
ICAM1 intercellular adhesion molecule 1 0.0352914
TXNRD1 thioredoxin reductase 1 0.0351353
SQSTM1 sequestosome 1 0.0347942
RAB7A RAB7A, member RAS oncogene family 0.0344694
CENPF centromere protein F, 350/400kDa 0.0343075
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.0339001
NAMPT nicotinamide phosphoribosyltransferase 0.0337978
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0334285
BACE2 beta-site APP-cleaving enzyme 2 0.0331993
RPS6 ribosomal protein S6 0.0328614
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0319443
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0318113
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa 0.0311181
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0308791
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0307642
NDRG1 N-myc downstream regulated 1 0.0305723
AFF4 AF4/FMR2 family, member 4 0.0305325
GALNT2 polypeptide N-acetylgalactosaminyltransferase 2 0.0305246
RHOA ras homolog family member A 0.0304873
FLNA filamin A, alpha 0.0299854
ANKRD28 ankyrin repeat domain 28 0.0299008
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0298404
CD44 CD44 molecule (Indian blood group) 0.029805
INPP5F inositol polyphosphate-5-phosphatase F 0.0296109
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.029532
NRG3 neuregulin 3 0.0294193
CANX calnexin 0.028836
UBC ubiquitin C 0.0287797
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0286129
WWTR1 WW domain containing transcription regulator 1 0.0274083
SOD2 superoxide dismutase 2, mitochondrial 0.0274062
MCL1 myeloid cell leukemia 1 0.0273022
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0268128
CLTC clathrin, heavy chain (Hc) 0.026506
KPNB1 karyopherin (importin) beta 1 0.0264141
GOLGA4 golgin A4 0.0263867
ANXA2 annexin A2 0.0263208
SSH1 slingshot protein phosphatase 1 0.0262694
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0260279
FRMD5 FERM domain containing 5 0.02565
GNAI3 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3 0.0254779
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) 0.0252724
ANXA5 annexin A5 0.0252085
MATR3 matrin 3 0.0248984
RPLP1 ribosomal protein, large, P1 0.0247869
PRRC2B proline-rich coiled-coil 2B 0.024579
TPT1 tumor protein, translationally-controlled 1 0.0245787
TBC1D5 TBC1 domain family, member 5 0.0241373
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0240959
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0240929
OGA O-GlcNAcase 0.0238337
TM4SF1 transmembrane 4 L six family member 1 0.0237056
LOC112694756 uncharaterized LOC112694756 0.0236251
RPS8 ribosomal protein S8 0.0234553
HSPA4 heat shock 70kDa protein 4 0.0233313
FUS FUS RNA binding protein 0.0230245
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.0229959
EGLN1 egl-9 family hypoxia-inducible factor 1 0.0229235
BCAS3 breast carcinoma amplified sequence 3 0.0228638
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0227898
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0226934
EPS8 epidermal growth factor receptor pathway substrate 8 0.0225456
PDIA3 protein disulfide isomerase family A, member 3 0.0224909
PCBP2 poly(rC) binding protein 2 0.0223391
MKLN1 muskelin 1, intracellular mediator containing kelch motifs 0.0222142
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0222131
TSC22D2 TSC22 domain family, member 2 0.0221036
G3BP2 GTPase activating protein (SH3 domain) binding protein 2 0.0221011
RAD21 RAD21 homolog (S. pombe) 0.0218909
PRKAR1A protein kinase, cAMP-dependent, regulatory, type I, alpha 0.0218889
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.0217444
RAPGEF6 Rap guanine nucleotide exchange factor (GEF) 6 0.0217036
ANLN anillin, actin binding protein 0.0214542
EP300 E1A binding protein p300 0.0212321
MARK3 MAP/microtubule affinity-regulating kinase 3 0.0208238
MAP1LC3B microtubule-associated protein 1 light chain 3 beta 0.0205285

decreased expression

Symbol Name Standardized Value
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0863338
ANKRD1 ankyrin repeat domain 1 (cardiac muscle) -0.0276524
ANGPTL4 angiopoietin-like 4 -0.0245691
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0225458
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 -0.0208997
ASPH aspartate beta-hydroxylase -0.0205432
RASAL2 RAS protein activator like 2 -0.0201718
CFAP20DC CFAP20 domain containing -0.0200174
SERPINA3 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 -0.0194473
EHBP1 EH domain binding protein 1 -0.0181072
AKAP12 A kinase (PRKA) anchor protein 12 -0.0176352
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.017556
ITPR1 inositol 1,4,5-trisphosphate receptor, type 1 -0.0171262
IGFBP3 insulin-like growth factor binding protein 3 -0.0166704
AUTS2 autism susceptibility candidate 2 -0.0158898
EFCAB13 EF-hand calcium binding domain 13 -0.015064
ARB2A ARB2 cotranscriptional regulator A -0.014203
MAML3 mastermind-like 3 (Drosophila) -0.0129407
LHFPL2 lipoma HMGIC fusion partner-like 2 -0.0120575
ANO6 anoctamin 6 -0.0113851
PLAT plasminogen activator, tissue -0.011332
WWC1 WW and C2 domain containing 1 -0.0111417
IFITM3 interferon induced transmembrane protein 3 -0.0107728
CNIH3 cornichon family AMPA receptor auxiliary protein 3 -0.0106854
FAM78B family with sequence similarity 78, member B -0.0105888
DPP6 dipeptidyl-peptidase 6 -0.0103395
TNS1 tensin 1 -0.010331
FLNB filamin B, beta -0.0101826
NLGN1 neuroligin 1 -0.0101056
NCOR2 nuclear receptor corepressor 2 -0.0100586
CADM1 cell adhesion molecule 1 -0.00996476
RNF150 ring finger protein 150 -0.00946586
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.00929328
ZNF704 zinc finger protein 704 -0.00919968
GRB10 growth factor receptor-bound protein 10 -0.0090712
GALNT18 polypeptide N-acetylgalactosaminyltransferase 18 -0.00879892
NAV1 neuron navigator 1 -0.00867066
TNNC1 troponin C type 1 (slow) -0.00864806
PLEKHA4 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4 -0.00863214
SLC8A1 solute carrier family 8 (sodium/calcium exchanger), member 1 -0.00863012
IFIH1 interferon induced with helicase C domain 1 -0.00847538
ATP11C ATPase, class VI, type 11C -0.00847372
SMAD3 SMAD family member 3 -0.00838117
SCARB1 scavenger receptor class B, member 1 -0.0082405
PTPRF protein tyrosine phosphatase, receptor type, F -0.00823409
SON SON DNA binding protein -0.00810994
HPSE2 heparanase 2 (inactive) -0.00810976
SUMF1 sulfatase modifying factor 1 -0.00808373
ANO4 anoctamin 4 -0.00807801
COL6A3 collagen, type VI, alpha 3 -0.00802331
SFMBT2 Scm-like with four mbt domains 2 -0.0080065
KCNC4 potassium channel, voltage gated Shaw related subfamily C, member 4 -0.00798006
RAP1GDS1 RAP1, GTP-GDP dissociation stimulator 1 -0.00795778
ENTHD1 ENTH domain containing 1 -0.00793648
SCFD2 sec1 family domain containing 2 -0.00789672
FAF1 Fas (TNFRSF6) associated factor 1 -0.00786048
MSI2 musashi RNA-binding protein 2 -0.00781046
ZNF827 zinc finger protein 827 -0.00769926
CEP83 centrosomal protein 83kDa -0.00766194
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.00761573
OGT O-linked N-acetylglucosamine (GlcNAc) transferase -0.00757363
AGRN agrin -0.00755882
WNT2B wingless-type MMTV integration site family, member 2B -0.00743032
CHD7 chromodomain helicase DNA binding protein 7 -0.00740777
FRMD6 FERM domain containing 6 -0.00736107
RAD51B RAD51 paralog B -0.0073137
SH3RF1 SH3 domain containing ring finger 1 -0.00726962
ZNF841 zinc finger protein 841 -0.0072145
YOD1 YOD1 deubiquitinase -0.00717582
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.00705771
SCMH1 sex comb on midleg homolog 1 (Drosophila) -0.00701777
IFI44L interferon-induced protein 44-like -0.00696502
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 -0.00692918
PPP6R3 protein phosphatase 6, regulatory subunit 3 -0.00690822
HSPA1A heat shock 70kDa protein 1A -0.00688703
MLLT3 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3 -0.0068657
WDR25 WD repeat domain 25 -0.00683288
MAMLD1 mastermind-like domain containing 1 -0.0068214
SOX5 SRY (sex determining region Y)-box 5 -0.00681586
GPATCH2L G patch domain containing 2-like -0.00680605
MLPH melanophilin -0.00673997
SMARCA2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 -0.00671493
WASL Wiskott-Aldrich syndrome-like -0.00669684
ARHGEF10 Rho guanine nucleotide exchange factor (GEF) 10 -0.00664868
DHFR dihydrofolate reductase -0.00659474
EPB41 erythrocyte membrane protein band 4.1 -0.00656541
MX2 MX dynamin-like GTPase 2 -0.00647504
SAMD4A sterile alpha motif domain containing 4A -0.0064599
DRAP1 DR1-associated protein 1 (negative cofactor 2 alpha) -0.00641121
MICAL3 microtubule associated monooxygenase, calponin and LIM domain containing 3 -0.00637663
RALGDS ral guanine nucleotide dissociation stimulator -0.00635389
OSBPL6 oxysterol binding protein-like 6 -0.00634263
BCKDHB branched chain keto acid dehydrogenase E1, beta polypeptide -0.00634003
OSBPL3 oxysterol binding protein-like 3 -0.00633696
FBXW7 F-box and WD repeat domain containing 7, E3 ubiquitin protein ligase -0.00630471
PRR16 proline rich 16 -0.00617992
TBC1D22A TBC1 domain family, member 22A -0.00615207
SDC2 syndecan 2 -0.00614979
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.00614215
TOB2 transducer of ERBB2, 2 -0.00613571