ERK5-IN-2_SNU-1 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description ERK5-IN-2 perturbation in SNU-1 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the ERK5-IN-2_SNU-1 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
EEF2 eukaryotic translation elongation factor 2 0.102036
EZR ezrin 0.0730402
GOLGA4 golgin A4 0.071179
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0540917
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0486726
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0466566
ZNF292 zinc finger protein 292 0.0456061
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 0.0443865
TXNIP thioredoxin interacting protein 0.0400161
ZNF608 zinc finger protein 608 0.0389901
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0386068
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0384651
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0377179
PCBP2 poly(rC) binding protein 2 0.037616
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0375965
KMT2E lysine (K)-specific methyltransferase 2E 0.0349529
HELZ helicase with zinc finger 0.0333687
PDGFC platelet derived growth factor C 0.0324302
HDAC9 histone deacetylase 9 0.0324262
UBA6 ubiquitin-like modifier activating enzyme 6 0.0322148
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0311123
TJP1 tight junction protein 1 0.0302932
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0297249
SRRM2 serine/arginine repetitive matrix 2 0.0295884
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0279422
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme 0.0273453
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0272443
MATR3 matrin 3 0.0271781
FAM13A family with sequence similarity 13, member A 0.0271118
AKAP9 A kinase (PRKA) anchor protein 9 0.0266583
KDM4C lysine (K)-specific demethylase 4C 0.0266511
TFG TRK-fused gene 0.0265559
LDHA lactate dehydrogenase A 0.0263764
RPL3 ribosomal protein L3 0.0259904
TRA2A transformer 2 alpha homolog (Drosophila) 0.0259374
BRWD1 bromodomain and WD repeat domain containing 1 0.025181
PRRC2C proline-rich coiled-coil 2C 0.0250239
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.02491
PLK2 polo-like kinase 2 0.0245204
CCNL1 cyclin L1 0.0243484
NBAS neuroblastoma amplified sequence 0.0238636
NUP58 nucleoporin 58 0.0238235
QKI QKI, KH domain containing, RNA binding 0.0231946
GLS2 glutaminase 2 (liver, mitochondrial) 0.0230463
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 0.0226267
KMT2C lysine (K)-specific methyltransferase 2C 0.0224238
APLP2 amyloid beta (A4) precursor-like protein 2 0.0221813
COPB1 coatomer protein complex, subunit beta 1 0.0220648
EIF3H eukaryotic translation initiation factor 3, subunit H 0.0220061
ATOSA atos homolog A 0.0218726
SMC3 structural maintenance of chromosomes 3 0.0215927
IARS1 isoleucyl-tRNA synthetase 1 0.0215375
ARID1A AT rich interactive domain 1A (SWI-like) 0.021439
TAC4 tachykinin 4 (hemokinin) 0.0212697
SGMS2 sphingomyelin synthase 2 0.0212046
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0211529
NAMPT nicotinamide phosphoribosyltransferase 0.0210876
COPA coatomer protein complex, subunit alpha 0.0209229
SEC24D SEC24 family member D 0.0207216
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0205312
HSPA8 heat shock 70kDa protein 8 0.0201723
RAB6A RAB6A, member RAS oncogene family 0.019922
RNF145 ring finger protein 145 0.0199056
GOLGB1 golgin B1 0.0198798
NCEH1 neutral cholesterol ester hydrolase 1 0.0198469
FLNA filamin A, alpha 0.0197872
USP47 ubiquitin specific peptidase 47 0.0195323
MBNL2 muscleblind-like splicing regulator 2 0.0194583
FAT1 FAT atypical cadherin 1 0.0194411
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0193512
COG6 component of oligomeric golgi complex 6 0.0192135
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 0.0192131
DSCAM Down syndrome cell adhesion molecule 0.0188915
SEC24A SEC24 family member A 0.0188904
SF3B1 splicing factor 3b, subunit 1, 155kDa 0.0188614
ATP6V1H ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H 0.018708
ADAM9 ADAM metallopeptidase domain 9 0.0187028
RFX3 regulatory factor X, 3 (influences HLA class II expression) 0.0185869
SRP54 signal recognition particle 54kDa 0.0185255
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 0.0185235
NFKB2 nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100) 0.018418
RAB7A RAB7A, member RAS oncogene family 0.0182811
RLF rearranged L-myc fusion 0.0182797
POTEF POTE ankyrin domain family, member F 0.0182712
EEF1G eukaryotic translation elongation factor 1 gamma 0.0182224
CNOT1 CCR4-NOT transcription complex, subunit 1 0.0179984
CABIN1 calcineurin binding protein 1 0.0179614
MXI1 MAX interactor 1, dimerization protein 0.0176859
RTN4 reticulon 4 0.0174811
SUCO SUN domain containing ossification factor 0.0172656
JUN jun proto-oncogene 0.0171887
P4HB prolyl 4-hydroxylase, beta polypeptide 0.017001
HM13 histocompatibility (minor) 13 0.0169982
RNMT RNA (guanine-7-) methyltransferase 0.0168769
ECT2 epithelial cell transforming 2 0.0168137
TACC2 transforming, acidic coiled-coil containing protein 2 0.0167119
BRD2 bromodomain containing 2 0.0167108
ELOVL5 ELOVL fatty acid elongase 5 0.0166315
RB1CC1 RB1-inducible coiled-coil 1 0.016574
SEC31A SEC31 homolog A (S. cerevisiae) 0.0165546

decreased expression

Symbol Name Standardized Value
PTMA prothymosin, alpha -0.259455
AHNAK AHNAK nucleoprotein -0.15129
B3GALT1 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1 -0.148414
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.13106
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.126893
VCL vinculin -0.106031
CPED1 cadherin-like and PC-esterase domain containing 1 -0.101868
BMP10 bone morphogenetic protein 10 -0.0992351
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0941731
PDE4B phosphodiesterase 4B, cAMP-specific -0.0866261
FOXP1 forkhead box P1 -0.0862602
NBEA neurobeachin -0.0833181
TPT1 tumor protein, translationally-controlled 1 -0.0819657
ENOX1 ecto-NOX disulfide-thiol exchanger 1 -0.0752873
CCND1 cyclin D1 -0.0729334
RPL35A ribosomal protein L35a -0.0686811
GLI3 GLI family zinc finger 3 -0.0671812
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa -0.0655131
DLG1 discs, large homolog 1 (Drosophila) -0.065272
ZMYND8 zinc finger, MYND-type containing 8 -0.0555686
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0540813
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0531927
RPL34 ribosomal protein L34 -0.0526385
RPS6 ribosomal protein S6 -0.0518059
RPS23 ribosomal protein S23 -0.0517977
RPLP1 ribosomal protein, large, P1 -0.0497685
TTC28 tetratricopeptide repeat domain 28 -0.0496385
RPL19 ribosomal protein L19 -0.0488117
RPL31 ribosomal protein L31 -0.0474741
EFNA5 ephrin-A5 -0.0462773
RPS24 ribosomal protein S24 -0.0456676
ACTG1 actin gamma 1 -0.0455613
RPS21 ribosomal protein S21 -0.0452924
RPS13 ribosomal protein S13 -0.0451088
TNFRSF11B tumor necrosis factor receptor superfamily, member 11b -0.0446002
PDE4D phosphodiesterase 4D, cAMP-specific -0.0445159
CACNB4 calcium channel, voltage-dependent, beta 4 subunit -0.0422775
ZNF438 zinc finger protein 438 -0.0399954
CAMKMT calmodulin-lysine N-methyltransferase -0.0391782
NFIA nuclear factor I/A -0.0389929
RPL26 ribosomal protein L26 -0.0385681
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0382093
RPS27A ribosomal protein S27a -0.0381466
TAS2R14 taste receptor, type 2, member 14 -0.0377919
MYL12B myosin, light chain 12B, regulatory -0.037283
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0368815
MKI67 marker of proliferation Ki-67 -0.0367078
EGFR epidermal growth factor receptor -0.0364597
TM4SF1 transmembrane 4 L six family member 1 -0.0353388
RPS8 ribosomal protein S8 -0.0352869
S100A6 S100 calcium binding protein A6 -0.0350926
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0349546
RFC3 replication factor C (activator 1) 3, 38kDa -0.03486
GLI2 GLI family zinc finger 2 -0.0346868
SDK1 sidekick cell adhesion molecule 1 -0.0343112
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0341398
CUX1 cut-like homeobox 1 -0.0331006
RPS19 ribosomal protein S19 -0.0330158
FLNB filamin B, beta -0.0324207
PDE7B phosphodiesterase 7B -0.031836
CYB5B cytochrome b5 type B (outer mitochondrial membrane) -0.0315925
KPNB1 karyopherin (importin) beta 1 -0.0313746
PRELID2 PRELI domain containing 2 -0.0310534
NT5C2 5'-nucleotidase, cytosolic II -0.0307574
PYGB phosphorylase, glycogen; brain -0.0305225
UNC13A unc-13 homolog A (C. elegans) -0.0302707
DIAPH2 diaphanous-related formin 2 -0.0302413
GNAQ guanine nucleotide binding protein (G protein), q polypeptide -0.0301879
ALDH3A2 aldehyde dehydrogenase 3 family, member A2 -0.0301303
RPL9 ribosomal protein L9 -0.0299676
RPS25 ribosomal protein S25 -0.0298773
SMYD3 SET and MYND domain containing 3 -0.0297154
S100A9 S100 calcium binding protein A9 -0.0296615
S100A4 S100 calcium binding protein A4 -0.0295797
RPL38 ribosomal protein L38 -0.0293252
RPL23 ribosomal protein L23 -0.0292217
RPLP2 ribosomal protein, large, P2 -0.0289797
EBNA1BP2 EBNA1 binding protein 2 -0.0287257
SLC1A3 solute carrier family 1 (glial high affinity glutamate transporter), member 3 -0.0285426
HIBCH 3-hydroxyisobutyryl-CoA hydrolase -0.0285021
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 -0.0283687
S100A10 S100 calcium binding protein A10 -0.0279552
RPL37A ribosomal protein L37a -0.0273887
RPS29 ribosomal protein S29 -0.0273143
PRG2 proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein) -0.0272107
TXNRD1 thioredoxin reductase 1 -0.0272069
UGGT2 UDP-glucose glycoprotein glucosyltransferase 2 -0.0271742
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 -0.0270184
PARD3 par-3 family cell polarity regulator -0.0267729
DIAPH3 diaphanous-related formin 3 -0.0267438
GCLM glutamate-cysteine ligase, modifier subunit -0.0263206
RPLP0 ribosomal protein, large, P0 -0.0258255
TUBB4B tubulin, beta 4B class IVb -0.0254178
EIF1 eukaryotic translation initiation factor 1 -0.0252884
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0245174
BICD1 bicaudal D homolog 1 (Drosophila) -0.0240486
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon -0.0234576
PTPRG protein tyrosine phosphatase, receptor type, G -0.0233474
SOX6 SRY (sex determining region Y)-box 6 -0.0228829
GPATCH8 G patch domain containing 8 -0.02276