ERK5-IN-2_SW 1088 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description ERK5-IN-2 perturbation in SW 1088 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the ERK5-IN-2_SW 1088 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
IGFBP3 insulin-like growth factor binding protein 3 0.22665
TGFBI transforming growth factor, beta-induced, 68kDa 0.164631
COL6A3 collagen, type VI, alpha 3 0.145988
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.105303
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0950591
NDRG1 N-myc downstream regulated 1 0.0780995
ERRFI1 ERBB receptor feedback inhibitor 1 0.0701494
MYH9 myosin, heavy chain 9, non-muscle 0.0692932
CALR calreticulin 0.0688852
FTH1 ferritin, heavy polypeptide 1 0.0664162
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0652132
FN1 fibronectin 1 0.0608027
COL5A1 collagen, type V, alpha 1 0.058624
ANXA2 annexin A2 0.0545751
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0545046
ZSWIM6 zinc finger, SWIM-type containing 6 0.0536234
FAM13A family with sequence similarity 13, member A 0.053612
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.052777
CD44 CD44 molecule (Indian blood group) 0.0512304
HDLBP high density lipoprotein binding protein 0.0494476
PRELID2 PRELI domain containing 2 0.0490332
SOD2 superoxide dismutase 2, mitochondrial 0.0475126
CANX calnexin 0.0471547
KYNU kynureninase 0.0471134
VEGFA vascular endothelial growth factor A 0.0460729
EEF2 eukaryotic translation elongation factor 2 0.0446104
FNDC3B fibronectin type III domain containing 3B 0.0444509
GOLGB1 golgin B1 0.0421041
FLNA filamin A, alpha 0.0417895
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0417769
AKAP9 A kinase (PRKA) anchor protein 9 0.0409963
ITGA5 integrin, alpha 5 (fibronectin receptor, alpha polypeptide) 0.0409308
NRXN3 neurexin 3 0.0400922
LOXL2 lysyl oxidase-like 2 0.0392456
FNIP1 folliculin interacting protein 1 0.0383623
ENO1 enolase 1, (alpha) 0.0375888
RAB1A RAB1A, member RAS oncogene family 0.0373445
LDHA lactate dehydrogenase A 0.0366087
EGFR epidermal growth factor receptor 0.0359027
PTGES2 prostaglandin E synthase 2 0.0353165
PGK1 phosphoglycerate kinase 1 0.0350664
KMT2E lysine (K)-specific methyltransferase 2E 0.0339493
SLC6A6 solute carrier family 6 (neurotransmitter transporter), member 6 0.0338202
GLG1 golgi glycoprotein 1 0.0335831
ZBTB20 zinc finger and BTB domain containing 20 0.0334836
MACF1 microtubule-actin crosslinking factor 1 0.0333426
EXT1 exostosin glycosyltransferase 1 0.033209
GOLGA4 golgin A4 0.0322117
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.0309427
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) 0.0300383
PSD3 pleckstrin and Sec7 domain containing 3 0.0298548
COL6A2 collagen, type VI, alpha 2 0.0298244
CALU calumenin 0.0298041
SND1 staphylococcal nuclease and tudor domain containing 1 0.0296819
HOOK2 hook microtubule-tethering protein 2 0.0296201
BSG basigin (Ok blood group) 0.0293028
MORF4L2 mortality factor 4 like 2 0.0292818
ELL2 elongation factor, RNA polymerase II, 2 0.0288219
TRIO trio Rho guanine nucleotide exchange factor 0.0282257
ARRDC3 arrestin domain containing 3 0.0280028
SHB Src homology 2 domain containing adaptor protein B 0.0276325
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0270359
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0270291
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0269536
ZMIZ1 zinc finger, MIZ-type containing 1 0.0268435
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.026639
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.0266216
AHNAK AHNAK nucleoprotein 0.0264931
COL6A1 collagen, type VI, alpha 1 0.0264629
TRA2A transformer 2 alpha homolog (Drosophila) 0.0262565
DSCAM Down syndrome cell adhesion molecule 0.0260992
ARB2A ARB2 cotranscriptional regulator A 0.0259648
PDIA6 protein disulfide isomerase family A, member 6 0.0259541
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.025922
SEC24D SEC24 family member D 0.0255505
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0254066
PGM3 phosphoglucomutase 3 0.0251632
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0250212
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0249307
MCL1 myeloid cell leukemia 1 0.0244169
ZNF395 zinc finger protein 395 0.0241608
GLS2 glutaminase 2 (liver, mitochondrial) 0.0239963
RND3 Rho family GTPase 3 0.023814
COPA coatomer protein complex, subunit alpha 0.0237553
PDXDC1 pyridoxal-dependent decarboxylase domain containing 1 0.0236976
GNAI3 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3 0.0236663
GSE1 Gse1 coiled-coil protein 0.0235318
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0235229
PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 0.0234627
INTS6 integrator complex subunit 6 0.0232686
CTSB cathepsin B 0.0232144
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.023067
TNS3 tensin 3 0.0229669
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0223242
PLEC plectin 0.0221975
COPB1 coatomer protein complex, subunit beta 1 0.0220239
TTC3 tetratricopeptide repeat domain 3 0.0218881
TNIP1 TNFAIP3 interacting protein 1 0.0218
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0217656
CDH11 cadherin 11, type 2, OB-cadherin (osteoblast) 0.0213716

decreased expression

Symbol Name Standardized Value
MT2A metallothionein 2A -0.0688267
COL1A2 collagen, type I, alpha 2 -0.0489155
TMSB10 thymosin beta 10 -0.044647
COL1A1 collagen, type I, alpha 1 -0.0329201
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.0315115
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0286572
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0219362
MAP1B microtubule-associated protein 1B -0.0218161
S100A6 S100 calcium binding protein A6 -0.0209927
TPM1 tropomyosin 1 (alpha) -0.020982
KLF7 Kruppel-like factor 7 (ubiquitous) -0.0204899
PNRC1 proline-rich nuclear receptor coactivator 1 -0.0188927
HLA-B major histocompatibility complex, class I, B -0.01878
ADAM9 ADAM metallopeptidase domain 9 -0.0186794
PI3 peptidase inhibitor 3, skin-derived -0.0186066
LOX lysyl oxidase -0.0179156
GPC6 glypican 6 -0.0175709
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0171201
PTBP3 polypyrimidine tract binding protein 3 -0.0169897
PFN1 profilin 1 -0.0168151
MT1X metallothionein 1X -0.0161524
MAP4K5 mitogen-activated protein kinase kinase kinase kinase 5 -0.0156003
TMEM158 transmembrane protein 158 (gene/pseudogene) -0.0152689
INHBA inhibin, beta A -0.0151199
TXNRD1 thioredoxin reductase 1 -0.0142656
FOSL1 FOS-like antigen 1 -0.0139991
EGR1 early growth response 1 -0.0132265
PLAT plasminogen activator, tissue -0.0126467
ARPC5 actin related protein 2/3 complex, subunit 5, 16kDa -0.0122106
NT5E 5'-nucleotidase, ecto (CD73) -0.0119473
ZMYM2 zinc finger, MYM-type 2 -0.011877
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0118659
SLPI secretory leukocyte peptidase inhibitor -0.0116838
UBE2Q2 ubiquitin-conjugating enzyme E2Q family member 2 -0.0116218
RRAS2 related RAS viral (r-ras) oncogene homolog 2 -0.0115066
C1ORF21 chromosome 1 open reading frame 21 -0.0114334
ADAM10 ADAM metallopeptidase domain 10 -0.0112386
USP12 ubiquitin specific peptidase 12 -0.0112339
ACTG1 actin gamma 1 -0.0111186
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0110515
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.0110305
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.0109192
IFITM3 interferon induced transmembrane protein 3 -0.0108356
NEK7 NIMA-related kinase 7 -0.010811
USP3 ubiquitin specific peptidase 3 -0.0108029
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0107841
CEP290 centrosomal protein 290kDa -0.0106294
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa -0.0106138
NUCB2 nucleobindin 2 -0.0104704
MYO6 myosin VI -0.0104418
PDE10A phosphodiesterase 10A -0.0102421
SNX6 sorting nexin 6 -0.0101813
RTN4 reticulon 4 -0.0101337
SMIM14 small integral membrane protein 14 -0.0101217
NRG1 neuregulin 1 -0.010038
CD109 CD109 molecule -0.0100303
LUC7L3 LUC7-like 3 (S. cerevisiae) -0.0100282
ZEB1 zinc finger E-box binding homeobox 1 -0.00996454
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.00989724
PHKB phosphorylase kinase, beta -0.00987878
RPL36 ribosomal protein L36 -0.00984121
SMIM44 small integral membrane protein 44 -0.00979736
RPL19 ribosomal protein L19 -0.00974304
RNF11 ring finger protein 11 -0.00970464
PPP1R15B protein phosphatase 1, regulatory subunit 15B -0.00970265
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) -0.00963371
DDX60 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 -0.00949664
RFX7 regulatory factor X, 7 -0.00943098
ETV3 ets variant 3 -0.00942033
BRWD1 bromodomain and WD repeat domain containing 1 -0.0093671
GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) -0.00931937
DTNA dystrobrevin, alpha -0.00924701
GNAI1 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1 -0.00921652
PLCB4 phospholipase C, beta 4 -0.00920245
TIMP1 TIMP metallopeptidase inhibitor 1 -0.00915197
NUP153 nucleoporin 153kDa -0.00911345
LUZP1 leucine zipper protein 1 -0.00906937
RPL27 ribosomal protein L27 -0.00906197
MAP2K4 mitogen-activated protein kinase kinase 4 -0.00905611
NUP58 nucleoporin 58 -0.00905295
TES testin LIM domain protein -0.00901897
G3BP1 GTPase activating protein (SH3 domain) binding protein 1 -0.00900652
YBX3 Y box binding protein 3 -0.00899918
NFIA nuclear factor I/A -0.00896593
JAK1 Janus kinase 1 -0.00896137
LRRC8C leucine rich repeat containing 8 family, member C -0.008947
EML4 echinoderm microtubule associated protein like 4 -0.00892172
CARD16 caspase recruitment domain family, member 16 -0.00890124
VEZT vezatin, adherens junctions transmembrane protein -0.00887228
ZFP36 ZFP36 ring finger protein -0.00883058
PDE8A phosphodiesterase 8A -0.00882939
HBS1L HBS1-like translational GTPase -0.00882062
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 -0.00879727
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit -0.00879036
GRB2 growth factor receptor-bound protein 2 -0.00874092
TENM2 teneurin transmembrane protein 2 -0.00873878
FNBP1L formin binding protein 1-like -0.0087011
RAP1B RAP1B, member of RAS oncogene family -0.00869537
UBE2R2 ubiquitin-conjugating enzyme E2R 2 -0.0086744
LIMCH1 LIM and calponin homology domains 1 -0.00864391