ETC-206_AN3 CA Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description ETC-206 perturbation in AN3 CA cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the ETC-206_AN3 CA drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
VIM vimentin 0.246025
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.16645
HMGA2 high mobility group AT-hook 2 0.113435
ACTG1 actin gamma 1 0.11188
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.105468
TSHZ2 teashirt zinc finger homeobox 2 0.0990585
ENO1 enolase 1, (alpha) 0.0914993
EEF2 eukaryotic translation elongation factor 2 0.0765092
TRIO trio Rho guanine nucleotide exchange factor 0.0730305
MYOF myoferlin 0.0687293
PRKG1 protein kinase, cGMP-dependent, type I 0.0669521
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0658189
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0632041
AHNAK AHNAK nucleoprotein 0.0589941
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.0589864
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0573776
FGFR1 fibroblast growth factor receptor 1 0.055503
POTEF POTE ankyrin domain family, member F 0.053866
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.051514
CTBP2 C-terminal binding protein 2 0.0510074
PEG10 paternally expressed 10 0.0507146
RPL3 ribosomal protein L3 0.049433
APLP2 amyloid beta (A4) precursor-like protein 2 0.0483722
ZMIZ1 zinc finger, MIZ-type containing 1 0.0468592
VEGFA vascular endothelial growth factor A 0.0464805
GMDS GDP-mannose 4,6-dehydratase 0.0462156
IPO7 importin 7 0.0450295
CADM2 cell adhesion molecule 2 0.0438786
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0425127
ATP11A ATPase, class VI, type 11A 0.0424233
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0422961
SFPQ splicing factor proline/glutamine-rich 0.0422406
THBS1 thrombospondin 1 0.039838
TSC22D1 TSC22 domain family, member 1 0.0391534
MSRB3 methionine sulfoxide reductase B3 0.0388418
FRMD6 FERM domain containing 6 0.038759
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0386087
PCBP2 poly(rC) binding protein 2 0.0383752
RPL37A ribosomal protein L37a 0.0380165
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0366468
EGFR epidermal growth factor receptor 0.035403
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0353753
KDM4C lysine (K)-specific demethylase 4C 0.0350557
RPL23 ribosomal protein L23 0.03493
RAI1 retinoic acid induced 1 0.0342302
B3GALT1 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1 0.033394
SIK3 SIK family kinase 3 0.0328225
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0323173
ANO6 anoctamin 6 0.0321607
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0319864
EIF4A1 eukaryotic translation initiation factor 4A1 0.0319589
RCOR1 REST corepressor 1 0.03135
LDHA lactate dehydrogenase A 0.0310761
PHF3 PHD finger protein 3 0.0310093
USP9X ubiquitin specific peptidase 9, X-linked 0.0308368
MGP matrix Gla protein 0.0301931
FLNB filamin B, beta 0.030191
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0297874
HSPA8 heat shock 70kDa protein 8 0.0297216
ARID1A AT rich interactive domain 1A (SWI-like) 0.0295052
INTS6 integrator complex subunit 6 0.0291969
AFF4 AF4/FMR2 family, member 4 0.0290855
DNAJB6 DnaJ (Hsp40) homolog, subfamily B, member 6 0.0278529
PLS3 plastin 3 0.0272577
MAP1B microtubule-associated protein 1B 0.0272509
AGO2 argonaute RISC catalytic component 2 0.0268789
DOCK1 dedicator of cytokinesis 1 0.0268784
PKM pyruvate kinase, muscle 0.0267473
RPS8 ribosomal protein S8 0.0266726
KANK1 KN motif and ankyrin repeat domains 1 0.0259686
HMGA1 high mobility group AT-hook 1 0.025288
ADIPOR2 adiponectin receptor 2 0.0251565
HNRNPR heterogeneous nuclear ribonucleoprotein R 0.0251003
YBX1 Y box binding protein 1 0.0249423
TIMP1 TIMP metallopeptidase inhibitor 1 0.0249093
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0248491
SAMD4A sterile alpha motif domain containing 4A 0.0243238
PDE10A phosphodiesterase 10A 0.0242875
RPL4 ribosomal protein L4 0.0241903
JMJD1C jumonji domain containing 1C 0.0241548
RPS4X ribosomal protein S4, X-linked 0.0241096
EIF4B eukaryotic translation initiation factor 4B 0.0240863
PARD3B par-3 family cell polarity regulator beta 0.0237698
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0236107
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0235408
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.023387
SERTAD2 SERTA domain containing 2 0.0233204
EGR1 early growth response 1 0.0233171
CUBN cubilin (intrinsic factor-cobalamin receptor) 0.0231708
LOXL2 lysyl oxidase-like 2 0.0230509
LPP LIM domain containing preferred translocation partner in lipoma 0.0228576
RPS3 ribosomal protein S3 0.0227208
EIF5AL1 eukaryotic translation initiation factor 5A-like 1 0.0225972
TM9SF4 transmembrane 9 superfamily protein member 4 0.0222945
MEST mesoderm specific transcript 0.0222346
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.0221872
KAT6B K(lysine) acetyltransferase 6B 0.0221642
NBEA neurobeachin 0.022035
CSNK1A1 casein kinase 1, alpha 1 0.0220109
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0218583

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.152493
ZNF292 zinc finger protein 292 -0.0827802
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0765762
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.071635
QKI QKI, KH domain containing, RNA binding -0.068256
TOP2A topoisomerase (DNA) II alpha 170kDa -0.063186
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0593202
CENPF centromere protein F, 350/400kDa -0.0589617
MKI67 marker of proliferation Ki-67 -0.057924
MEOX2 mesenchyme homeobox 2 -0.0564747
MED13L mediator complex subunit 13-like -0.0561731
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0552211
TPK1 thiamin pyrophosphokinase 1 -0.0540341
ITGAV integrin, alpha V -0.0518384
USP3 ubiquitin specific peptidase 3 -0.0507556
NFIB nuclear factor I/B -0.050235
TRA2A transformer 2 alpha homolog (Drosophila) -0.0493512
RAD21 RAD21 homolog (S. pombe) -0.0483854
SBF2 SET binding factor 2 -0.0480299
H1-4 H1.4 linker histone, cluster member -0.0477197
PTMA prothymosin, alpha -0.0470418
ZEB1 zinc finger E-box binding homeobox 1 -0.0468343
MIS18BP1 MIS18 binding protein 1 -0.0454589
PELI1 pellino E3 ubiquitin protein ligase 1 -0.0449975
PDIA3 protein disulfide isomerase family A, member 3 -0.0445794
NAMPT nicotinamide phosphoribosyltransferase -0.044528
RPS2 ribosomal protein S2 -0.0438718
RPS6 ribosomal protein S6 -0.0428746
PRKDC protein kinase, DNA-activated, catalytic polypeptide -0.0425637
DLG1 discs, large homolog 1 (Drosophila) -0.0419242
SEPTIN11 septin 11 -0.0416174
HMGB2 high mobility group box 2 -0.0415962
KDM3A lysine (K)-specific demethylase 3A -0.0414211
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0413098
CENPE centromere protein E, 312kDa -0.0409261
SCAF11 SR-related CTD-associated factor 11 -0.0404035
PNISR PNN-interacting serine/arginine-rich protein -0.0383272
BTBD3 BTB (POZ) domain containing 3 -0.0383228
CAMTA1 calmodulin binding transcription activator 1 -0.0380631
NFIA nuclear factor I/A -0.0376781
DIAPH3 diaphanous-related formin 3 -0.0374817
MARCHF6 membrane associated ring-CH-type finger 6 -0.0366682
RLF rearranged L-myc fusion -0.0365174
LMO4 LIM domain only 4 -0.0363974
FAF1 Fas (TNFRSF6) associated factor 1 -0.0363782
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 -0.0362786
RPS24 ribosomal protein S24 -0.0359673
TPX2 TPX2, microtubule-associated -0.0358577
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.035552
G2E3 G2/M-phase specific E3 ubiquitin protein ligase -0.0350305
FGFR2 fibroblast growth factor receptor 2 -0.0346673
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0346475
RPL8 ribosomal protein L8 -0.0346153
MT2A metallothionein 2A -0.0345576
SMC4 structural maintenance of chromosomes 4 -0.0335124
HOXA3 homeobox A3 -0.0334244
XPO1 exportin 1 -0.0333898
DDX50 DEAD (Asp-Glu-Ala-Asp) box polypeptide 50 -0.0332265
RPL38 ribosomal protein L38 -0.0331499
WTAP Wilms tumor 1 associated protein -0.033107
RTN4 reticulon 4 -0.0328248
DNAJC1 DnaJ (Hsp40) homolog, subfamily C, member 1 -0.0325561
RNF145 ring finger protein 145 -0.0325115
CKAP2 cytoskeleton associated protein 2 -0.0324428
GAS2L3 growth arrest-specific 2 like 3 -0.0320845
WBP11 WW domain binding protein 11 -0.0320211
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0320144
SUCO SUN domain containing ossification factor -0.0317901
RHEB Ras homolog enriched in brain -0.0317768
LUC7L3 LUC7-like 3 (S. cerevisiae) -0.0316847
CAPRIN1 cell cycle associated protein 1 -0.0313371
WSB1 WD repeat and SOCS box containing 1 -0.0311799
SCLT1 sodium channel and clathrin linker 1 -0.0309363
PRELID2 PRELI domain containing 2 -0.0308326
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0308282
OGA O-GlcNAcase -0.0306722
FXR1 fragile X mental retardation, autosomal homolog 1 -0.0304681
IRF2BP2 interferon regulatory factor 2 binding protein 2 -0.0303778
PJA2 praja ring finger 2, E3 ubiquitin protein ligase -0.0300132
ANLN anillin, actin binding protein -0.0299083
PPP2CA protein phosphatase 2, catalytic subunit, alpha isozyme -0.029607
MNAT1 MNAT CDK-activating kinase assembly factor 1 -0.0294588
MAP4K5 mitogen-activated protein kinase kinase kinase kinase 5 -0.0293263
TOP2B topoisomerase (DNA) II beta 180kDa -0.0289252
KIF20B kinesin family member 20B -0.028672
ARID2 AT rich interactive domain 2 (ARID, RFX-like) -0.0284481
FANCI Fanconi anemia, complementation group I -0.0281076
TMEM123 transmembrane protein 123 -0.0279135
PDE4D phosphodiesterase 4D, cAMP-specific -0.0277175
RSRC1 arginine/serine-rich coiled-coil 1 -0.0274545
ELF2 E74-like factor 2 (ets domain transcription factor) -0.0272027
RAB1A RAB1A, member RAS oncogene family -0.0270335
RPS23 ribosomal protein S23 -0.0269741
SSBP2 single-stranded DNA binding protein 2 -0.0267953
EYA1 EYA transcriptional coactivator and phosphatase 1 -0.0267847
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) -0.026649
TFG TRK-fused gene -0.0266196
TPT1 tumor protein, translationally-controlled 1 -0.0264706
RPS15 ribosomal protein S15 -0.0263655
BUB1B BUB1 mitotic checkpoint serine/threonine kinase B -0.0263219