ETC-206_CHP-212 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description ETC-206 perturbation in CHP-212 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the ETC-206_CHP-212 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
DDX1 DEAD (Asp-Glu-Ala-Asp) box helicase 1 0.232103
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.117435
MYCN v-myc avian myelocytomatosis viral oncogene neuroblastoma derived homolog 0.0823715
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0601965
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0525785
PTMA prothymosin, alpha 0.0454039
ACTG1 actin gamma 1 0.0436681
PCBP2 poly(rC) binding protein 2 0.0435644
APP amyloid beta (A4) precursor protein 0.0421653
VIM vimentin 0.0421222
CENPF centromere protein F, 350/400kDa 0.0414981
TBX2 T-box 2 0.0392861
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0375693
TIPARP TCDD-inducible poly(ADP-ribose) polymerase 0.0359652
POTEF POTE ankyrin domain family, member F 0.0358437
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0355794
RPL3 ribosomal protein L3 0.0332374
PTEN phosphatase and tensin homolog 0.0309907
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0306049
ZSWIM6 zinc finger, SWIM-type containing 6 0.0304718
SET SET nuclear proto-oncogene 0.0302569
PRRC2C proline-rich coiled-coil 2C 0.0284553
UCHL1 ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase) 0.0280846
EIF4A1 eukaryotic translation initiation factor 4A1 0.0278542
LOC102724023 ES1 protein homolog, mitochondrial 0.0278244
ARHGAP9 Rho GTPase activating protein 9 0.0272025
NAP1L1 nucleosome assembly protein 1-like 1 0.0264043
ENO1 enolase 1, (alpha) 0.0260513
SCG2 secretogranin II 0.026006
HMGB2 high mobility group box 2 0.0259379
EEF2 eukaryotic translation elongation factor 2 0.0255057
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0254584
PCM1 pericentriolar material 1 0.0248496
TLE4 transducin-like enhancer of split 4 0.0243938
MMP2 matrix metallopeptidase 2 0.0239314
FXR1 fragile X mental retardation, autosomal homolog 1 0.0228932
MKI67 marker of proliferation Ki-67 0.0225867
RPS3 ribosomal protein S3 0.0216129
B2M beta-2-microglobulin 0.0214874
EIF1 eukaryotic translation initiation factor 1 0.0214155
COL4A1 collagen, type IV, alpha 1 0.0213319
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 0.020773
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0206459
RPL23 ribosomal protein L23 0.0203535
RACK1 receptor for activated C kinase 1 0.0202983
RUNX1 runt-related transcription factor 1 0.020214
STC1 stanniocalcin 1 0.0188118
EYA1 EYA transcriptional coactivator and phosphatase 1 0.0178486
HSPA8 heat shock 70kDa protein 8 0.017707
DDX24 DEAD (Asp-Glu-Ala-Asp) box helicase 24 0.0175813
TLN1 talin 1 0.0175728
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0173577
HILPDA hypoxia inducible lipid droplet-associated 0.0171519
NEK1 NIMA-related kinase 1 0.0168875
PELO pelota homolog (Drosophila) 0.0168344
ADAR adenosine deaminase, RNA-specific 0.0168077
ZNF146 zinc finger protein 146 0.0167938
RPS4Y1 ribosomal protein S4, Y-linked 1 0.0165278
SPARC secreted protein, acidic, cysteine-rich (osteonectin) 0.0164489
PLPP1 phospholipid phosphatase 1 0.0163959
CBX3 chromobox homolog 3 0.0163592
MED13L mediator complex subunit 13-like 0.0163535
CCNL1 cyclin L1 0.0163305
RAB30 RAB30, member RAS oncogene family 0.0162127
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0162082
ZMIZ1 zinc finger, MIZ-type containing 1 0.0159923
ZBTB18 zinc finger and BTB domain containing 18 0.0158601
CCNY cyclin Y 0.0157528
YBX1 Y box binding protein 1 0.0156937
RPL7 ribosomal protein L7 0.0154842
RPS4X ribosomal protein S4, X-linked 0.0151329
PDE3A phosphodiesterase 3A, cGMP-inhibited 0.0151239
TRA2B transformer 2 beta homolog (Drosophila) 0.015074
WNT5A wingless-type MMTV integration site family, member 5A 0.0150457
GREM2 gremlin 2, DAN family BMP antagonist 0.0150315
BRD2 bromodomain containing 2 0.0148881
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0148863
MATR3 matrin 3 0.0148616
DHX40 DEAH (Asp-Glu-Ala-His) box polypeptide 40 0.0148466
CSDE1 cold shock domain containing E1, RNA-binding 0.0148005
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.0147391
GOLGA4 golgin A4 0.0146574
NFE2L2 nuclear factor, erythroid 2-like 2 0.0145915
SNAP25 synaptosomal-associated protein, 25kDa 0.0145881
EEF1G eukaryotic translation elongation factor 1 gamma 0.0145538
RNASEH2A ribonuclease H2, subunit A 0.014534
DGKH diacylglycerol kinase, eta 0.0143295
CKAP5 cytoskeleton associated protein 5 0.0142969
TAF7 TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa 0.0142389
POLR2B polymerase (RNA) II (DNA directed) polypeptide B, 140kDa 0.0138327
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0138011
HAS2 hyaluronan synthase 2 0.0136149
SCARB2 scavenger receptor class B, member 2 0.0134344
RGS5 regulator of G-protein signaling 5 0.0133903
ZNF331 zinc finger protein 331 0.0133782
ANKRD12 ankyrin repeat domain 12 0.0133362
ACTN1 actinin, alpha 1 0.0131612
CDPF1 cysteine-rich, DPF motif domain containing 1 0.0131561
SGIP1 SH3-domain GRB2-like (endophilin) interacting protein 1 0.0131559
SMG7 SMG7 nonsense mediated mRNA decay factor 0.0131247

decreased expression

Symbol Name Standardized Value
IGF2 insulin-like growth factor 2 -0.246191
LSAMP limbic system-associated membrane protein -0.212474
NRG1 neuregulin 1 -0.194925
PTPRD protein tyrosine phosphatase, receptor type, D -0.0950231
NALF1 NALCN channel auxiliary factor 1 -0.0804713
PRKCA protein kinase C, alpha -0.0760662
THSD4 thrombospondin, type I, domain containing 4 -0.0625293
MBD5 methyl-CpG binding domain protein 5 -0.0548267
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0536105
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.053352
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0527836
NREP neuronal regeneration related protein -0.0522675
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0512369
EGR1 early growth response 1 -0.0508721
RAD51B RAD51 paralog B -0.0506459
TPT1 tumor protein, translationally-controlled 1 -0.0506384
ZBTB20 zinc finger and BTB domain containing 20 -0.0505443
FNDC3B fibronectin type III domain containing 3B -0.0489839
EXT1 exostosin glycosyltransferase 1 -0.0483858
ZNF804A zinc finger protein 804A -0.0460592
GULP1 GULP, engulfment adaptor PTB domain containing 1 -0.0460366
BCAS3 breast carcinoma amplified sequence 3 -0.0441131
GPC5 glypican 5 -0.0428772
CUX1 cut-like homeobox 1 -0.0418972
RPTOR regulatory associated protein of MTOR, complex 1 -0.0416795
FMN1 formin 1 -0.0414265
PTPRM protein tyrosine phosphatase, receptor type, M -0.0412463
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) -0.0411713
BPTF bromodomain PHD finger transcription factor -0.0405086
NCAM2 neural cell adhesion molecule 2 -0.0398812
RPL38 ribosomal protein L38 -0.0397576
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) -0.0387738
COL1A1 collagen, type I, alpha 1 -0.0386108
RPL35A ribosomal protein L35a -0.0358435
IGFBP3 insulin-like growth factor binding protein 3 -0.0355196
FRMD4A FERM domain containing 4A -0.0335141
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0317151
CPED1 cadherin-like and PC-esterase domain containing 1 -0.0315516
SMYD3 SET and MYND domain containing 3 -0.0311331
DPH6 diphthamine biosynthesis 6 -0.0309453
MSI2 musashi RNA-binding protein 2 -0.0299308
DLC1 DLC1 Rho GTPase activating protein -0.0288228
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) -0.0284871
MEIS2 Meis homeobox 2 -0.0283718
TCF12 transcription factor 12 -0.0283303
COL4A5 collagen, type IV, alpha 5 -0.0282952
RPS24 ribosomal protein S24 -0.0282887
CACNA2D1 calcium channel, voltage-dependent, alpha 2/delta subunit 1 -0.0277027
LINGO2 leucine rich repeat and Ig domain containing 2 -0.0276279
AUTS2 autism susceptibility candidate 2 -0.0269374
MAPK10 mitogen-activated protein kinase 10 -0.0269238
MED13 mediator complex subunit 13 -0.0268329
FHIT fragile histidine triad -0.0267987
NDRG1 N-myc downstream regulated 1 -0.0267536
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 -0.0264756
PARD3 par-3 family cell polarity regulator -0.0264552
LPP LIM domain containing preferred translocation partner in lipoma -0.0264394
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.0260843
AKT3 v-akt murine thymoma viral oncogene homolog 3 -0.026052
DNAH14 dynein, axonemal, heavy chain 14 -0.0259127
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0255939
VCL vinculin -0.0255373
LRP1B low density lipoprotein receptor-related protein 1B -0.0250288
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0250229
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.024871
SYT1 synaptotagmin I -0.0245651
DLG1 discs, large homolog 1 (Drosophila) -0.024158
RPS8 ribosomal protein S8 -0.0240535
FNDC3A fibronectin type III domain containing 3A -0.0240344
SLC39A11 solute carrier family 39, member 11 -0.0235772
TBL1X transducin (beta)-like 1X-linked -0.0235687
CADM1 cell adhesion molecule 1 -0.0232396
KDM4C lysine (K)-specific demethylase 4C -0.0232327
RPLP1 ribosomal protein, large, P1 -0.0232308
IGFBP5 insulin-like growth factor binding protein 5 -0.0230597
CDK12 cyclin-dependent kinase 12 -0.0230035
CEP350 centrosomal protein 350kDa -0.0227829
TIMP2 TIMP metallopeptidase inhibitor 2 -0.0226306
ANKRD17 ankyrin repeat domain 17 -0.0223949
CNTN4 contactin 4 -0.0223155
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.0223043
TNRC6B trinucleotide repeat containing 6B -0.0221053
KMT2C lysine (K)-specific methyltransferase 2C -0.021749
RPL34 ribosomal protein L34 -0.021653
MAML2 mastermind-like 2 (Drosophila) -0.0214675
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 -0.0213045
IER3 immediate early response 3 -0.0210196
RPS6KC1 ribosomal protein S6 kinase, 52kDa, polypeptide 1 -0.0204643
SP100 SP100 nuclear antigen -0.0204613
CDH13 cadherin 13 -0.0202682
CEMIP cell migration inducing protein, hyaluronan binding -0.0201466
KCTD16 potassium channel tetramerization domain containing 16 -0.019968
PTPRE protein tyrosine phosphatase, receptor type, E -0.0199005
RAB1A RAB1A, member RAS oncogene family -0.0198966
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.019764
MNAT1 MNAT CDK-activating kinase assembly factor 1 -0.019665
COMMD10 COMM domain containing 10 -0.0196108
PTK2 protein tyrosine kinase 2 -0.0195046
HELZ helicase with zinc finger -0.0194845
AOPEP aminopeptidase O (putative) -0.0193862