ETC-206_COLO 205 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description ETC-206 perturbation in COLO 205 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the ETC-206_COLO 205 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
VCL vinculin 0.122092
DNAJC15 DnaJ (Hsp40) homolog, subfamily C, member 15 0.11759
INTS6 integrator complex subunit 6 0.0965719
LMO7 LIM domain 7 0.0897443
HCN1 hyperpolarization activated cyclic nucleotide gated potassium channel 1 0.0857041
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0846837
LRCH1 leucine-rich repeats and calponin homology (CH) domain containing 1 0.0839394
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0839222
EXT1 exostosin glycosyltransferase 1 0.0817239
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0788105
MACC1 metastasis associated in colon cancer 1 0.0692592
CHST11 carbohydrate (chondroitin 4) sulfotransferase 11 0.0689392
ZSWIM6 zinc finger, SWIM-type containing 6 0.0562637
SMAD3 SMAD family member 3 0.0551746
GCLC glutamate-cysteine ligase, catalytic subunit 0.0512793
PDLIM5 PDZ and LIM domain 5 0.0500481
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0496447
AKAP13 A kinase (PRKA) anchor protein 13 0.0483728
LOC102724023 ES1 protein homolog, mitochondrial 0.0476359
PLSCR2 phospholipid scramblase 2 0.0463264
MUC13 mucin 13, cell surface associated 0.0446552
TSC22D1 TSC22 domain family, member 1 0.0441127
TNFRSF21 tumor necrosis factor receptor superfamily, member 21 0.0438547
ARHGAP26 Rho GTPase activating protein 26 0.0436274
CYP3A5 cytochrome P450, family 3, subfamily A, polypeptide 5 0.0426414
STS steroid sulfatase (microsomal), isozyme S 0.0403335
RNF213 ring finger protein 213 0.0401174
HSPH1 heat shock 105kDa/110kDa protein 1 0.0389889
AREG amphiregulin 0.0374517
EREG epiregulin 0.0371732
MYO1E myosin IE 0.0371432
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0371166
LURAP1L leucine rich adaptor protein 1-like 0.0351892
MX1 MX dynamin-like GTPase 1 0.0344559
N4BP2L2 NEDD4 binding protein 2-like 2 0.034432
DSCAM Down syndrome cell adhesion molecule 0.0338575
ERN1 endoplasmic reticulum to nucleus signaling 1 0.0334286
SIPA1L2 signal-induced proliferation-associated 1 like 2 0.0330009
MYO10 myosin X 0.0329426
TUFT1 tuftelin 1 0.0328575
FAT1 FAT atypical cadherin 1 0.0322734
LCN2 lipocalin 2 0.0317236
TMC5 transmembrane channel-like 5 0.0307848
DIP2B DIP2 disco-interacting protein 2 homolog B (Drosophila) 0.0306883
FHL2 four and a half LIM domains 2 0.0300818
PDZD8 PDZ domain containing 8 0.0299962
ETV6 ets variant 6 0.0297543
SIK3 SIK family kinase 3 0.0296598
GULP1 GULP, engulfment adaptor PTB domain containing 1 0.0294386
MYH9 myosin, heavy chain 9, non-muscle 0.0294361
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0292474
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0284361
HSPA8 heat shock 70kDa protein 8 0.0279432
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0277743
TRIP12 thyroid hormone receptor interactor 12 0.0271389
POTEF POTE ankyrin domain family, member F 0.027011
TIPARP TCDD-inducible poly(ADP-ribose) polymerase 0.0264579
PHF3 PHD finger protein 3 0.0264102
TOX3 TOX high mobility group box family member 3 0.026347
NR6A1 nuclear receptor subfamily 6, group A, member 1 0.0262798
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0259229
VMP1 vacuole membrane protein 1 0.0255314
DST dystonin 0.0252843
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 0.0250071
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0248809
CDHR2 cadherin-related family member 2 0.0244486
ACTG1 actin gamma 1 0.0242989
NCEH1 neutral cholesterol ester hydrolase 1 0.0238968
ADORA2B adenosine A2b receptor 0.0237103
KLF5 Kruppel-like factor 5 (intestinal) 0.0234989
SET SET nuclear proto-oncogene 0.0231873
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0231729
PRAG1 PEAK1 related, kinase-activating pseudokinase 1 0.0230907
APP amyloid beta (A4) precursor protein 0.023075
EPSTI1 epithelial stromal interaction 1 (breast) 0.0224791
ITGA6 integrin, alpha 6 0.0222497
TMEM65 transmembrane protein 65 0.0217755
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0217362
SORBS1 sorbin and SH3 domain containing 1 0.0216322
FOS FBJ murine osteosarcoma viral oncogene homolog 0.0215643
FNIP2 folliculin interacting protein 2 0.0213331
FHIT fragile histidine triad 0.0213132
WEE1 WEE1 G2 checkpoint kinase 0.0211901
DPP4 dipeptidyl-peptidase 4 0.0211814
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0210849
YAP1 Yes-associated protein 1 0.0210656
EPHB2 EPH receptor B2 0.0206654
MYO5B myosin VB 0.0206225
KTN1 kinectin 1 (kinesin receptor) 0.0203906
NFE2L2 nuclear factor, erythroid 2-like 2 0.0200744
ACTN1 actinin, alpha 1 0.0197424
JAG1 jagged 1 0.019534
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0194955
DSCAML1 Down syndrome cell adhesion molecule like 1 0.0194737
MSI2 musashi RNA-binding protein 2 0.0194318
RBM47 RNA binding motif protein 47 0.0187963
KYNU kynureninase 0.0187279
APLP2 amyloid beta (A4) precursor-like protein 2 0.0186051
SH3PXD2A SH3 and PX domains 2A 0.018592
TRIO trio Rho guanine nucleotide exchange factor 0.0184971

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.14102
B2M beta-2-microglobulin -0.12693
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.116816
TPT1 tumor protein, translationally-controlled 1 -0.108312
ZMYND8 zinc finger, MYND-type containing 8 -0.0996526
HLA-B major histocompatibility complex, class I, B -0.0864961
NDRG1 N-myc downstream regulated 1 -0.0817413
PTMA prothymosin, alpha -0.0791365
MBNL2 muscleblind-like splicing regulator 2 -0.0753121
C6ORF132 chromosome 6 open reading frame 132 -0.0730543
EGR1 early growth response 1 -0.0650004
RHOBTB3 Rho-related BTB domain containing 3 -0.0641379
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0621316
H1-0 H1.0 linker histone -0.0611163
BTBD9 BTB (POZ) domain containing 9 -0.0595586
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0565803
NCKAP5 NCK-associated protein 5 -0.056383
IFI6 interferon, alpha-inducible protein 6 -0.0558305
EIF1 eukaryotic translation initiation factor 1 -0.0545722
DIAPH3 diaphanous-related formin 3 -0.0510783
FNDC3B fibronectin type III domain containing 3B -0.0508385
SREBF2 sterol regulatory element binding transcription factor 2 -0.0505695
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0503641
AHI1 Abelson helper integration site 1 -0.0500397
TMSB10 thymosin beta 10 -0.0472392
SQSTM1 sequestosome 1 -0.0462642
RPL35A ribosomal protein L35a -0.0462008
CPEB4 cytoplasmic polyadenylation element binding protein 4 -0.045742
ZKSCAN1 zinc finger with KRAB and SCAN domains 1 -0.0457227
RPL34 ribosomal protein L34 -0.0453009
PARP4 poly (ADP-ribose) polymerase family, member 4 -0.0452666
GCC2 GRIP and coiled-coil domain containing 2 -0.0441463
FNDC3A fibronectin type III domain containing 3A -0.0438764
WSB1 WD repeat and SOCS box containing 1 -0.0437931
HLA-E major histocompatibility complex, class I, E -0.0434199
MKI67 marker of proliferation Ki-67 -0.0428357
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0416121
MT2A metallothionein 2A -0.0410432
XAF1 XIAP associated factor 1 -0.0406951
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0397615
TMPRSS4 transmembrane protease, serine 4 -0.0387048
RPS24 ribosomal protein S24 -0.0382232
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0382141
HLA-C major histocompatibility complex, class I, C -0.0382
RABGAP1L RAB GTPase activating protein 1-like -0.0376118
HLA-A major histocompatibility complex, class I, A -0.0352606
SNTB1 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) -0.0351952
FOXO3 forkhead box O3 -0.0351468
SPATS2L spermatogenesis associated, serine-rich 2-like -0.0350846
MON2 MON2 homolog (S. cerevisiae) -0.0339293
ERBIN erbb2 interacting protein -0.0338209
NT5C3A 5'-nucleotidase, cytosolic IIIA -0.0337854
NAALADL2 N-acetylated alpha-linked acidic dipeptidase-like 2 -0.0329855
PTBP3 polypyrimidine tract binding protein 3 -0.0329322
LOC112694756 uncharaterized LOC112694756 -0.0326663
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0320605
PDIA3 protein disulfide isomerase family A, member 3 -0.0319408
PERP PERP, TP53 apoptosis effector -0.0317193
SSH2 slingshot protein phosphatase 2 -0.0315652
GNAS GNAS complex locus -0.0313999
FMN1 formin 1 -0.0313259
PATJ PATJ crumbs cell polarity complex component -0.0308768
NF1 neurofibromin 1 -0.0307266
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0307041
APOL1 apolipoprotein L, 1 -0.0306372
CENPF centromere protein F, 350/400kDa -0.0306259
SYT1 synaptotagmin I -0.0304933
RPS6 ribosomal protein S6 -0.0304024
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b -0.0302757
NT5C2 5'-nucleotidase, cytosolic II -0.0299043
RPL7L1 ribosomal protein L7-like 1 -0.0298502
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 -0.0298501
CENPP centromere protein P -0.0297814
SLC38A2 solute carrier family 38, member 2 -0.0297008
RRBP1 ribosome binding protein 1 -0.0295312
SLC7A1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 -0.0291476
RPL23 ribosomal protein L23 -0.0288848
RPL12 ribosomal protein L12 -0.0286942
RPL26 ribosomal protein L26 -0.0285419
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0284149
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0283865
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0283634
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0282851
RUNX1 runt-related transcription factor 1 -0.0281303
NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta -0.0280297
TBC1D22A TBC1 domain family, member 22A -0.0279161
ISG15 ISG15 ubiquitin-like modifier -0.0279122
RPL11 ribosomal protein L11 -0.0278059
S100A6 S100 calcium binding protein A6 -0.0277243
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0277116
FOXP1 forkhead box P1 -0.0275974
RNF43 ring finger protein 43 -0.0273856
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.0273853
TM9SF3 transmembrane 9 superfamily member 3 -0.0273225
UBAC2 UBA domain containing 2 -0.0272511
UBC ubiquitin C -0.0266969
SCAPER S-phase cyclin A-associated protein in the ER -0.0266422
PRELID2 PRELI domain containing 2 -0.0266242
PTPRF protein tyrosine phosphatase, receptor type, F -0.0265227
PTEN phosphatase and tensin homolog -0.0263807