ETC-206_HOP62 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description ETC-206 perturbation in HOP62 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the ETC-206_HOP62 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0973874
ENO1 enolase 1, (alpha) 0.0627575
ERRFI1 ERBB receptor feedback inhibitor 1 0.0497698
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.0411409
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0342988
TIMP1 TIMP metallopeptidase inhibitor 1 0.0301716
MT2A metallothionein 2A 0.0301276
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0283587
AHNAK AHNAK nucleoprotein 0.0277893
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0273327
RPL3 ribosomal protein L3 0.0266114
HSPA8 heat shock 70kDa protein 8 0.0247886
POTEF POTE ankyrin domain family, member F 0.0240576
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0239251
RPS12 ribosomal protein S12 0.023451
PCBP2 poly(rC) binding protein 2 0.023387
MYH9 myosin, heavy chain 9, non-muscle 0.0226912
TPM3 tropomyosin 3 0.0221741
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0210736
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0206989
EIF4B eukaryotic translation initiation factor 4B 0.019322
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0189005
SET SET nuclear proto-oncogene 0.0188446
ITPR3 inositol 1,4,5-trisphosphate receptor, type 3 0.0179504
SFPQ splicing factor proline/glutamine-rich 0.0165714
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.016553
EEF2 eukaryotic translation elongation factor 2 0.0160911
UCHL1 ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase) 0.0160908
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0157084
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0155827
CSDE1 cold shock domain containing E1, RNA-binding 0.014684
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.0143288
RPL37A ribosomal protein L37a 0.0138842
NFE2L1 nuclear factor, erythroid 2-like 1 0.0128976
YBX1 Y box binding protein 1 0.0128524
RPS3 ribosomal protein S3 0.012405
TMF1 TATA element modulatory factor 1 0.0123472
L1CAM L1 cell adhesion molecule 0.0122354
CAPRIN2 caprin family member 2 0.0122282
PLEC plectin 0.0121841
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0116936
CENPF centromere protein F, 350/400kDa 0.0115738
MSN moesin 0.0115222
RPS2 ribosomal protein S2 0.0113
JAG1 jagged 1 0.0112701
DSPP dentin sialophosphoprotein 0.0112448
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 0.0112325
RPS7 ribosomal protein S7 0.0111745
LDHA lactate dehydrogenase A 0.0111573
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0110278
APLP2 amyloid beta (A4) precursor-like protein 2 0.010754
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0103338
PRKAR1A protein kinase, cAMP-dependent, regulatory, type I, alpha 0.0102858
BZW1 basic leucine zipper and W2 domains 1 0.0102532
RALB v-ral simian leukemia viral oncogene homolog B 0.0100126
RPL4 ribosomal protein L4 0.00994913
EIF5 eukaryotic translation initiation factor 5 0.00964399
TLN1 talin 1 0.00956761
SRSF5 serine/arginine-rich splicing factor 5 0.00956696
GRAMD1B GRAM domain containing 1B 0.00951441
TOP2A topoisomerase (DNA) II alpha 170kDa 0.00950018
TSPYL2 TSPY-like 2 0.00902591
EIF3A eukaryotic translation initiation factor 3, subunit A 0.00894839
AXL AXL receptor tyrosine kinase 0.00878404
IPO7 importin 7 0.00872715
COL5A3 collagen, type V, alpha 3 0.00864612
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.00861831
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.00851616
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.008423
EDIL3 EGF-like repeats and discoidin I-like domains 3 0.00840923
VEGFA vascular endothelial growth factor A 0.00838223
RPL30 ribosomal protein L30 0.00837845
FXR1 fragile X mental retardation, autosomal homolog 1 0.00830587
FAM120A family with sequence similarity 120A 0.00826777
DSTN destrin (actin depolymerizing factor) 0.00825522
RBBP7 retinoblastoma binding protein 7 0.00813943
SF3A1 splicing factor 3a, subunit 1, 120kDa 0.00813003
KPNA4 karyopherin alpha 4 (importin alpha 3) 0.00811823
ATP2B4 ATPase, Ca++ transporting, plasma membrane 4 0.0080709
ANP32B acidic (leucine-rich) nuclear phosphoprotein 32 family, member B 0.00802154
SRRM1 serine/arginine repetitive matrix 1 0.00795154
SPRED2 sprouty-related, EVH1 domain containing 2 0.00783037
MAMLD1 mastermind-like domain containing 1 0.00782038
PDLIM5 PDZ and LIM domain 5 0.00778174
SMC1A structural maintenance of chromosomes 1A 0.00769613
SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein 0.00761073
PGM3 phosphoglucomutase 3 0.00757784
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.00749072
CLDND1 claudin domain containing 1 0.00747176
HNRNPDL heterogeneous nuclear ribonucleoprotein D-like 0.00740361
HNRNPR heterogeneous nuclear ribonucleoprotein R 0.00736361
TRIB1 tribbles pseudokinase 1 0.00733744
TGOLN2 trans-golgi network protein 2 0.00732382
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 0.00728678
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.00721271
FSCN2 fascin actin-bundling protein 2, retinal 0.00718923
MIER1 mesoderm induction early response 1, transcriptional regulator 0.00711657
F2R coagulation factor II (thrombin) receptor 0.0070933
COL4A1 collagen, type IV, alpha 1 0.00707502
RND3 Rho family GTPase 3 0.00705919

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.412292
VIM vimentin -0.277792
TMSB10 thymosin beta 10 -0.122685
FN1 fibronectin 1 -0.121833
IGF2 insulin-like growth factor 2 -0.115021
PTMA prothymosin, alpha -0.10693
CDH13 cadherin 13 -0.10127
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.0988601
TPT1 tumor protein, translationally-controlled 1 -0.0953623
NDRG1 N-myc downstream regulated 1 -0.0770884
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0765686
SIPA1L3 signal-induced proliferation-associated 1 like 3 -0.0759256
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0704053
ASPH aspartate beta-hydroxylase -0.0679861
TRIO trio Rho guanine nucleotide exchange factor -0.0649828
TM4SF1 transmembrane 4 L six family member 1 -0.05267
COL6A1 collagen, type VI, alpha 1 -0.0510958
EGR1 early growth response 1 -0.0501982
EXT1 exostosin glycosyltransferase 1 -0.0501105
HMGA2 high mobility group AT-hook 2 -0.049735
RPL35A ribosomal protein L35a -0.0493381
FNDC3B fibronectin type III domain containing 3B -0.0493031
CCND1 cyclin D1 -0.0491169
COL6A2 collagen, type VI, alpha 2 -0.0459679
COL1A1 collagen, type I, alpha 1 -0.0449653
S100A10 S100 calcium binding protein A10 -0.0445069
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0435724
IER3 immediate early response 3 -0.042156
RPS24 ribosomal protein S24 -0.0412164
TAS2R14 taste receptor, type 2, member 14 -0.0403405
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 -0.0395812
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0394961
WSB1 WD repeat and SOCS box containing 1 -0.038398
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0372219
MAML3 mastermind-like 3 (Drosophila) -0.0370679
ZFAND3 zinc finger, AN1-type domain 3 -0.0359331
RPS6 ribosomal protein S6 -0.0358882
RPL34 ribosomal protein L34 -0.0357803
FMN1 formin 1 -0.0356188
CAVIN1 caveolae associated protein 1 -0.0351741
PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 -0.0350683
ZMYND8 zinc finger, MYND-type containing 8 -0.034318
RAD51B RAD51 paralog B -0.0329931
NAV1 neuron navigator 1 -0.0323722
CDCP1 CUB domain containing protein 1 -0.0323531
RRBP1 ribosome binding protein 1 -0.0322776
KPNB1 karyopherin (importin) beta 1 -0.0313729
MAP4 microtubule-associated protein 4 -0.0310138
TUBB6 tubulin, beta 6 class V -0.0306938
P4HA2 prolyl 4-hydroxylase, alpha polypeptide II -0.0299903
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa -0.0293383
RPL38 ribosomal protein L38 -0.0290941
FRMD4A FERM domain containing 4A -0.0288824
PGK1 phosphoglycerate kinase 1 -0.0287183
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 -0.0286686
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.028649
PRKCA protein kinase C, alpha -0.0283968
RAB1A RAB1A, member RAS oncogene family -0.0283668
SEC31A SEC31 homolog A (S. cerevisiae) -0.028301
TGFBI transforming growth factor, beta-induced, 68kDa -0.0280243
GNAS GNAS complex locus -0.0275558
ANKRD12 ankyrin repeat domain 12 -0.0273717
RPS16 ribosomal protein S16 -0.0272781
IQGAP1 IQ motif containing GTPase activating protein 1 -0.0269727
ATXN1 ataxin 1 -0.0268
BTG1 B-cell translocation gene 1, anti-proliferative -0.0267755
ELL2 elongation factor, RNA polymerase II, 2 -0.0266209
LPP LIM domain containing preferred translocation partner in lipoma -0.0265471
ACTG1 actin gamma 1 -0.0264801
DIAPH2 diaphanous-related formin 2 -0.0262089
RPLP1 ribosomal protein, large, P1 -0.0261075
VDAC1 voltage-dependent anion channel 1 -0.0257761
RPLP2 ribosomal protein, large, P2 -0.0252899
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric -0.0252318
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0247657
UBE2E2 ubiquitin-conjugating enzyme E2E 2 -0.024503
APOLD1 apolipoprotein L domain containing 1 -0.0243352
PLAUR plasminogen activator, urokinase receptor -0.0242508
ADM adrenomedullin -0.0241664
RPS21 ribosomal protein S21 -0.0240341
RUNX1 runt-related transcription factor 1 -0.0239784
CUX1 cut-like homeobox 1 -0.0239003
PTK2 protein tyrosine kinase 2 -0.02371
SDK1 sidekick cell adhesion molecule 1 -0.0232201
COL5A1 collagen, type V, alpha 1 -0.0232117
HLA-B major histocompatibility complex, class I, B -0.0231584
SLC25A36 solute carrier family 25 (pyrimidine nucleotide carrier), member 36 -0.0229783
EMP1 epithelial membrane protein 1 -0.0227419
SEMA4B sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B -0.0226745
KANSL1 KAT8 regulatory NSL complex subunit 1 -0.0223028
MYO10 myosin X -0.0221018
TMEM263 transmembrane protein 263 -0.0219078
CAPN2 calpain 2, (m/II) large subunit -0.0218173
BTBD9 BTB (POZ) domain containing 9 -0.0217811
HM13 histocompatibility (minor) 13 -0.0217307
RAB7A RAB7A, member RAS oncogene family -0.0216861
JMJD1C jumonji domain containing 1C -0.0213054
DNAAF9 dynein axonemal assembly factor 9 -0.02122
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0211508
ASTN2 astrotactin 2 -0.0210181