ETC-206_SK-MEL-2 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description ETC-206 perturbation in SK-MEL-2 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the ETC-206_SK-MEL-2 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.269417
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.189517
DST dystonin 0.127718
NLGN1 neuroligin 1 0.0999023
ENO1 enolase 1, (alpha) 0.0945431
CENPF centromere protein F, 350/400kDa 0.0731546
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0692227
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0661958
PARP14 poly (ADP-ribose) polymerase family, member 14 0.063545
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0586905
NRG3 neuregulin 3 0.057591
HDAC9 histone deacetylase 9 0.0557083
RPS3 ribosomal protein S3 0.0528852
IFI44L interferon-induced protein 44-like 0.0524988
FRMD4A FERM domain containing 4A 0.0511626
GOLGB1 golgin B1 0.04818
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0448218
ANGPTL4 angiopoietin-like 4 0.044083
HSPA8 heat shock 70kDa protein 8 0.0439546
AHNAK AHNAK nucleoprotein 0.0435293
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0430492
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0429422
IGF1R insulin-like growth factor 1 receptor 0.0413083
FMN1 formin 1 0.0411905
RNF213 ring finger protein 213 0.0398111
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0379748
NAV2 neuron navigator 2 0.037661
RPL3 ribosomal protein L3 0.037375
POTEF POTE ankyrin domain family, member F 0.0366625
WWTR1 WW domain containing transcription regulator 1 0.0357053
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0350671
LRMDA leucine rich melanocyte differentiation associated 0.0349729
ZBTB20 zinc finger and BTB domain containing 20 0.0346478
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0342851
ASPH aspartate beta-hydroxylase 0.0341147
FBXL17 F-box and leucine-rich repeat protein 17 0.0337655
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) 0.0323726
KTN1 kinectin 1 (kinesin receptor) 0.0320079
NFE2L1 nuclear factor, erythroid 2-like 1 0.0317289
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0316301
MKI67 marker of proliferation Ki-67 0.0310309
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0309334
NRP2 neuropilin 2 0.0308713
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0307244
SET SET nuclear proto-oncogene 0.0306915
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0303578
EHBP1 EH domain binding protein 1 0.0299226
ATRX alpha thalassemia/mental retardation syndrome X-linked 0.0296611
TPM3 tropomyosin 3 0.0289077
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0284099
PRRC2C proline-rich coiled-coil 2C 0.0280579
ADAR adenosine deaminase, RNA-specific 0.027974
ENAH enabled homolog (Drosophila) 0.0276705
UTRN utrophin 0.0275817
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 0.0273936
CTSB cathepsin B 0.0270755
PTPRG protein tyrosine phosphatase, receptor type, G 0.0269723
UBASH3B ubiquitin associated and SH3 domain containing B 0.0267965
SFPQ splicing factor proline/glutamine-rich 0.0266655
CCT6A chaperonin containing TCP1, subunit 6A (zeta 1) 0.026651
CHST11 carbohydrate (chondroitin 4) sulfotransferase 11 0.0265599
MBNL1 muscleblind-like splicing regulator 1 0.0263562
SRRM2 serine/arginine repetitive matrix 2 0.0263175
IFIH1 interferon induced with helicase C domain 1 0.0262558
ARID1B AT rich interactive domain 1B (SWI1-like) 0.0261013
SAMD9 sterile alpha motif domain containing 9 0.0259147
AMOTL1 angiomotin like 1 0.0256247
EFNA5 ephrin-A5 0.025476
DNAH14 dynein, axonemal, heavy chain 14 0.0253337
IFI16 interferon, gamma-inducible protein 16 0.0253175
PLEKHA4 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4 0.0250075
ANXA5 annexin A5 0.0248416
MAML2 mastermind-like 2 (Drosophila) 0.0247916
SP100 SP100 nuclear antigen 0.0246185
XRCC6 X-ray repair complementing defective repair in Chinese hamster cells 6 0.0243627
DNAJB6 DnaJ (Hsp40) homolog, subfamily B, member 6 0.0242573
CSDE1 cold shock domain containing E1, RNA-binding 0.0240108
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 0.0239896
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 0.0239425
CTSL cathepsin L 0.0239385
PHF14 PHD finger protein 14 0.0238285
RASAL2 RAS protein activator like 2 0.0237395
RNF144A ring finger protein 144A 0.0237163
NAALADL2 N-acetylated alpha-linked acidic dipeptidase-like 2 0.0236787
ZMIZ1 zinc finger, MIZ-type containing 1 0.0233677
AKAP9 A kinase (PRKA) anchor protein 9 0.0233458
PCM1 pericentriolar material 1 0.0231986
PLSCR1 phospholipid scramblase 1 0.0229109
HDAC4 histone deacetylase 4 0.0227432
ERC2 ELKS/RAB6-interacting/CAST family member 2 0.022633
SON SON DNA binding protein 0.022473
BACE2 beta-site APP-cleaving enzyme 2 0.0223637
AUTS2 autism susceptibility candidate 2 0.0222306
CBX3 chromobox homolog 3 0.0221958
SOX6 SRY (sex determining region Y)-box 6 0.022016
THRAP3 thyroid hormone receptor associated protein 3 0.0218971
GRID2 glutamate receptor, ionotropic, delta 2 0.0218328
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 0.021817
NAP1L1 nucleosome assembly protein 1-like 1 0.0217331
SSH1 slingshot protein phosphatase 1 0.0216823

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.265674
FN1 fibronectin 1 -0.175528
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.152225
VIM vimentin -0.0795098
NDRG1 N-myc downstream regulated 1 -0.069928
RPL35A ribosomal protein L35a -0.0663425
SREBF2 sterol regulatory element binding transcription factor 2 -0.0634756
FTL ferritin, light polypeptide -0.0531724
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.053043
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0520305
RAB7A RAB7A, member RAS oncogene family -0.0505214
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0497156
WSB1 WD repeat and SOCS box containing 1 -0.047549
RPLP1 ribosomal protein, large, P1 -0.0474199
RPS6 ribosomal protein S6 -0.0456362
RPL38 ribosomal protein L38 -0.0443187
HMGA1 high mobility group AT-hook 1 -0.0441362
VDAC1 voltage-dependent anion channel 1 -0.0438718
GOLGA4 golgin A4 -0.0437974
ANKRD1 ankyrin repeat domain 1 (cardiac muscle) -0.041171
TMSB10 thymosin beta 10 -0.0399979
SETD5 SET domain containing 5 -0.0399398
MT2A metallothionein 2A -0.0398203
ELL2 elongation factor, RNA polymerase II, 2 -0.0396667
CLIC4 chloride intracellular channel 4 -0.0386821
GARS1 glycyl-tRNA synthetase 1 -0.0377515
TPT1 tumor protein, translationally-controlled 1 -0.0375088
RPS24 ribosomal protein S24 -0.0363885
RTN4 reticulon 4 -0.0357477
MAP4 microtubule-associated protein 4 -0.0343886
RPS23 ribosomal protein S23 -0.0339698
WDR45B WD repeat domain 45B -0.0328149
SLC25A36 solute carrier family 25 (pyrimidine nucleotide carrier), member 36 -0.0320431
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0319552
ADAM17 ADAM metallopeptidase domain 17 -0.0318292
BRWD3 bromodomain and WD repeat domain containing 3 -0.0313322
RPL8 ribosomal protein L8 -0.0310262
LOC112694756 uncharaterized LOC112694756 -0.0306379
RPL11 ribosomal protein L11 -0.0306139
KMT2E lysine (K)-specific methyltransferase 2E -0.0299598
RPS21 ribosomal protein S21 -0.029476
PPFIA1 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 -0.0294058
RPS16 ribosomal protein S16 -0.0293676
GLS2 glutaminase 2 (liver, mitochondrial) -0.0292664
KAZN kazrin, periplakin interacting protein -0.0289526
MARK3 MAP/microtubule affinity-regulating kinase 3 -0.0286946
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0285275
SPAG9 sperm associated antigen 9 -0.0284945
ESYT2 extended synaptotagmin-like protein 2 -0.028478
RPLP2 ribosomal protein, large, P2 -0.0283837
RPS15 ribosomal protein S15 -0.0280929
RPL34 ribosomal protein L34 -0.0279221
SNX9 sorting nexin 9 -0.0275108
TTC3 tetratricopeptide repeat domain 3 -0.0273684
NF1 neurofibromin 1 -0.0273646
BCAS3 breast carcinoma amplified sequence 3 -0.0270514
TPD52 tumor protein D52 -0.0269098
RPL12 ribosomal protein L12 -0.0268026
RLF rearranged L-myc fusion -0.0267549
NAMPT nicotinamide phosphoribosyltransferase -0.0264316
IER3 immediate early response 3 -0.0263403
RACK1 receptor for activated C kinase 1 -0.0263369
S100A9 S100 calcium binding protein A9 -0.0262842
BHLHE40 basic helix-loop-helix family, member e40 -0.0262675
YEATS2 YEATS domain containing 2 -0.0261287
RPS29 ribosomal protein S29 -0.0257508
ZFAND3 zinc finger, AN1-type domain 3 -0.0254366
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0254285
FYN FYN proto-oncogene, Src family tyrosine kinase -0.0252103
RPL28 ribosomal protein L28 -0.0251787
RPS5 ribosomal protein S5 -0.0250468
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0250412
IARS1 isoleucyl-tRNA synthetase 1 -0.024799
RBM39 RNA binding motif protein 39 -0.0246919
RPLP0 ribosomal protein, large, P0 -0.0246899
UPP1 uridine phosphorylase 1 -0.0245221
SEC24A SEC24 family member A -0.0239782
TFG TRK-fused gene -0.0238502
OXSR1 oxidative stress responsive 1 -0.0237175
RHEB Ras homolog enriched in brain -0.023634
ZMYND8 zinc finger, MYND-type containing 8 -0.0235766
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0232516
FOXO3 forkhead box O3 -0.0231763
KDM5B lysine (K)-specific demethylase 5B -0.0229572
SNU13 small nuclear ribonucleoprotein 13 -0.0229373
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.02255
UBC ubiquitin C -0.0225091
NT5C3A 5'-nucleotidase, cytosolic IIIA -0.0225049
PTTG1IP pituitary tumor-transforming 1 interacting protein -0.0224712
TRPC4AP transient receptor potential cation channel, subfamily C, member 4 associated protein -0.0223346
RAB1A RAB1A, member RAS oncogene family -0.0222648
MMP12 matrix metallopeptidase 12 -0.0220946
CANX calnexin -0.0217353
KDM3A lysine (K)-specific demethylase 3A -0.0213695
PIK3C2A phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha -0.0212291
TXNRD1 thioredoxin reductase 1 -0.0211471
ELF2 E74-like factor 2 (ets domain transcription factor) -0.0211438
RPS11 ribosomal protein S11 -0.0208363
EMP1 epithelial membrane protein 1 -0.0207955
ANK2 ankyrin 2, neuronal -0.0206633