ETC-206_SNU-1 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description ETC-206 perturbation in SNU-1 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the ETC-206_SNU-1 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PDE4D phosphodiesterase 4D, cAMP-specific 0.14621
PDE4B phosphodiesterase 4B, cAMP-specific 0.0828438
EGFR epidermal growth factor receptor 0.0759577
AHNAK AHNAK nucleoprotein 0.066792
BMP10 bone morphogenetic protein 10 0.0518245
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0430658
PDGFC platelet derived growth factor C 0.0362731
ANXA1 annexin A1 0.0349064
FER1L6 fer-1-like family member 6 0.0343944
SOX6 SRY (sex determining region Y)-box 6 0.0330888
ZNF608 zinc finger protein 608 0.031565
MYO5C myosin VC 0.0310532
HDAC9 histone deacetylase 9 0.0302079
RPL3 ribosomal protein L3 0.0287901
ALDH1A2 aldehyde dehydrogenase 1 family, member A2 0.0267793
RPL4 ribosomal protein L4 0.0250342
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0245336
HSPA8 heat shock 70kDa protein 8 0.0239314
GLI3 GLI family zinc finger 3 0.0239246
PRELID2 PRELI domain containing 2 0.0235222
DUSP4 dual specificity phosphatase 4 0.0233745
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0225477
SDK1 sidekick cell adhesion molecule 1 0.0224689
EZR ezrin 0.0215818
N4BP2L2 NEDD4 binding protein 2-like 2 0.0209818
APLP2 amyloid beta (A4) precursor-like protein 2 0.0206019
PRG2 proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein) 0.0195314
GLI2 GLI family zinc finger 2 0.0194161
MACROD2 MACRO domain containing 2 0.0190754
GALNT5 polypeptide N-acetylgalactosaminyltransferase 5 0.0185717
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0183308
INTS6 integrator complex subunit 6 0.0182397
MICAL2 microtubule associated monooxygenase, calponin and LIM domain containing 2 0.0176975
ENO1 enolase 1, (alpha) 0.0168632
TMCO3 transmembrane and coiled-coil domains 3 0.0167022
TSC22D1 TSC22 domain family, member 1 0.0162897
SAMD4A sterile alpha motif domain containing 4A 0.0161388
ARID5B AT rich interactive domain 5B (MRF1-like) 0.0159364
TRIOBP TRIO and F-actin binding protein 0.0158191
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.015564
RAB27B RAB27B, member RAS oncogene family 0.0154466
IRS1 insulin receptor substrate 1 0.0152911
SMAD3 SMAD family member 3 0.0149981
ENO2 enolase 2 (gamma, neuronal) 0.0147697
ZNF438 zinc finger protein 438 0.0147614
TFCP2 transcription factor CP2 0.01431
MCL1 myeloid cell leukemia 1 0.0138663
NCEH1 neutral cholesterol ester hydrolase 1 0.0137988
MACF1 microtubule-actin crosslinking factor 1 0.0136866
RPS6KA3 ribosomal protein S6 kinase, 90kDa, polypeptide 3 0.0134463
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0131403
EFNA5 ephrin-A5 0.0130465
PRUNE2 prune homolog 2 (Drosophila) 0.0129341
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0127714
SPTBN1 spectrin, beta, non-erythrocytic 1 0.012719
TGFBR3 transforming growth factor, beta receptor III 0.0126082
BMP2K BMP2 inducible kinase 0.0125603
PLK2 polo-like kinase 2 0.0124524
CRPPA CDP-L-ribitol pyrophosphorylase A 0.0121667
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0121477
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 0.0120953
CPNE1 copine I 0.0120378
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.0120202
NPAS2 neuronal PAS domain protein 2 0.0119144
CLIP1 CAP-GLY domain containing linker protein 1 0.0118354
ZEB1 zinc finger E-box binding homeobox 1 0.0116899
AMOTL2 angiomotin like 2 0.0116477
SPATS2L spermatogenesis associated, serine-rich 2-like 0.0114967
GPD2 glycerol-3-phosphate dehydrogenase 2 (mitochondrial) 0.0113775
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.011122
ANKS1B ankyrin repeat and sterile alpha motif domain containing 1B 0.0110653
SORBS2 sorbin and SH3 domain containing 2 0.0110383
SHROOM3 shroom family member 3 0.0110298
PCNX4 pecanex 4 0.0109944
EIF4B eukaryotic translation initiation factor 4B 0.0107915
CD93 CD93 molecule 0.0107889
MYO5A myosin VA (heavy chain 12, myoxin) 0.0105728
ANO1 anoctamin 1, calcium activated chloride channel 0.0103963
NAB1 NGFI-A binding protein 1 (EGR1 binding protein 1) 0.0103854
POTEF POTE ankyrin domain family, member F 0.0103398
ARMH3 armadillo like helical domain containing 3 0.0102736
APP amyloid beta (A4) precursor protein 0.0102273
YLPM1 YLP motif containing 1 0.0101577
KANK1 KN motif and ankyrin repeat domains 1 0.0101365
FBXW11 F-box and WD repeat domain containing 11 0.0101157
FOXP1 forkhead box P1 0.0100662
XIRP2 xin actin binding repeat containing 2 0.0100618
ARHGEF11 Rho guanine nucleotide exchange factor (GEF) 11 0.0100297
TXK TXK tyrosine kinase 0.0100221
DNMBP dynamin binding protein 0.0100042
TRIP12 thyroid hormone receptor interactor 12 0.00997682
PDE7B phosphodiesterase 7B 0.00996707
MYEOV myeloma overexpressed 0.00990733
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.0098735
CFAP44 cilia and flagella associated protein 44 0.00986442
MSRB3 methionine sulfoxide reductase B3 0.0098515
MFSD4B major facilitator superfamily domain containing 4B 0.00977506
GOSR2 golgi SNAP receptor complex member 2 0.00975867
GLIS3 GLIS family zinc finger 3 0.00973902
SMAD6 SMAD family member 6 0.00968099

decreased expression

Symbol Name Standardized Value
PTMA prothymosin, alpha -0.258258
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.254546
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.149343
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.125945
RPS6 ribosomal protein S6 -0.122922
TPT1 tumor protein, translationally-controlled 1 -0.11321
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0990897
RPL35A ribosomal protein L35a -0.0931278
GOLGA4 golgin A4 -0.0887739
S100A6 S100 calcium binding protein A6 -0.0737812
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0722013
RBM39 RNA binding motif protein 39 -0.0705341
ZNF292 zinc finger protein 292 -0.0704681
RPS8 ribosomal protein S8 -0.0675361
SSBP2 single-stranded DNA binding protein 2 -0.0673764
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0628264
B2M beta-2-microglobulin -0.0593539
PFN1 profilin 1 -0.0593242
RPS19 ribosomal protein S19 -0.0583777
PNISR PNN-interacting serine/arginine-rich protein -0.0562235
EVI5 ecotropic viral integration site 5 -0.0555836
RPLP1 ribosomal protein, large, P1 -0.0526946
RPL34 ribosomal protein L34 -0.0526155
RPL9 ribosomal protein L9 -0.0513378
RPL13A ribosomal protein L13a -0.050987
GNAS GNAS complex locus -0.0501289
WSB1 WD repeat and SOCS box containing 1 -0.049871
RPL12 ribosomal protein L12 -0.0494827
RPS23 ribosomal protein S23 -0.0491825
RPL37A ribosomal protein L37a -0.0490676
NAMPT nicotinamide phosphoribosyltransferase -0.048596
MINDY2 MINDY lysine 48 deubiquitinase 2 -0.0484877
RTN4 reticulon 4 -0.0484643
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0467464
ROCK1 Rho-associated, coiled-coil containing protein kinase 1 -0.0461922
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0460424
RPLP2 ribosomal protein, large, P2 -0.0450893
RPL26 ribosomal protein L26 -0.0446458
TMSB4X thymosin beta 4, X-linked -0.0444049
GARS1 glycyl-tRNA synthetase 1 -0.0436157
FTL ferritin, light polypeptide -0.042524
RPL19 ribosomal protein L19 -0.0418239
RPS25 ribosomal protein S25 -0.0417537
RPLP0 ribosomal protein, large, P0 -0.0416925
SMC3 structural maintenance of chromosomes 3 -0.0407176
RPS27A ribosomal protein S27a -0.0403682
RPS24 ribosomal protein S24 -0.0403371
ARID4B AT rich interactive domain 4B (RBP1-like) -0.040171
QKI QKI, KH domain containing, RNA binding -0.0391792
TMSB10 thymosin beta 10 -0.0390753
KDM3A lysine (K)-specific demethylase 3A -0.0390105
EML4 echinoderm microtubule associated protein like 4 -0.0380123
RPL11 ribosomal protein L11 -0.0379656
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0377553
ZFAND3 zinc finger, AN1-type domain 3 -0.0370565
RPS3 ribosomal protein S3 -0.0363791
RPL36 ribosomal protein L36 -0.0363462
NAP1L1 nucleosome assembly protein 1-like 1 -0.0360849
RPL7A ribosomal protein L7a -0.0360807
RBM25 RNA binding motif protein 25 -0.0360136
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0359877
EIF1 eukaryotic translation initiation factor 1 -0.0354133
TNFRSF11B tumor necrosis factor receptor superfamily, member 11b -0.035028
CDC73 cell division cycle 73 -0.0347313
RPL31 ribosomal protein L31 -0.0346475
RPL32 ribosomal protein L32 -0.034354
SEPTIN7 septin 7 -0.0341819
MT2A metallothionein 2A -0.0339917
TXNIP thioredoxin interacting protein -0.0338731
USP3 ubiquitin specific peptidase 3 -0.0334779
HSPA9 heat shock 70kDa protein 9 (mortalin) -0.0334282
RPS21 ribosomal protein S21 -0.0332536
PHIP pleckstrin homology domain interacting protein -0.0331561
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0329847
RPS11 ribosomal protein S11 -0.0329253
JMJD1C jumonji domain containing 1C -0.0327635
KMT2E lysine (K)-specific methyltransferase 2E -0.0327583
RPS12 ribosomal protein S12 -0.03258
SCAF11 SR-related CTD-associated factor 11 -0.0324931
RPS13 ribosomal protein S13 -0.0324282
SMNDC1 survival motor neuron domain containing 1 -0.0322016
CACNB4 calcium channel, voltage-dependent, beta 4 subunit -0.0320615
CCNL1 cyclin L1 -0.0320161
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0318311
MAP4K5 mitogen-activated protein kinase kinase kinase kinase 5 -0.0317326
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.031533
TPI1 triosephosphate isomerase 1 -0.0313503
HMGA1 high mobility group AT-hook 1 -0.0310589
FBXO11 F-box protein 11 -0.0310142
RPL8 ribosomal protein L8 -0.0308216
S100A9 S100 calcium binding protein A9 -0.0307584
TFG TRK-fused gene -0.0306396
ADAM9 ADAM metallopeptidase domain 9 -0.030381
DLG1 discs, large homolog 1 (Drosophila) -0.0301844
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.030173
KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 -0.0299513
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0298135
PRRC2C proline-rich coiled-coil 2C -0.02978
COG5 component of oligomeric golgi complex 5 -0.0296475
PTBP2 polypyrimidine tract binding protein 2 -0.0292799