ETC-206_SNU-423 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description ETC-206 perturbation in SNU-423 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the ETC-206_SNU-423 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.167301
AKAP12 A kinase (PRKA) anchor protein 12 0.144229
MYH9 myosin, heavy chain 9, non-muscle 0.139107
AHNAK AHNAK nucleoprotein 0.13516
CD44 CD44 molecule (Indian blood group) 0.114708
VCAN versican 0.0968416
COL6A3 collagen, type VI, alpha 3 0.0964193
VIM vimentin 0.0962496
BASP1 brain abundant, membrane attached signal protein 1 0.089459
LDHA lactate dehydrogenase A 0.0860467
EEF2 eukaryotic translation elongation factor 2 0.0795422
ENO1 enolase 1, (alpha) 0.0794445
SFTPA2 surfactant protein A2 0.0756535
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0737926
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.073328
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0711998
LOC102724023 ES1 protein homolog, mitochondrial 0.0705117
SOD2 superoxide dismutase 2, mitochondrial 0.0668223
STC1 stanniocalcin 1 0.0661699
GLIS3 GLIS family zinc finger 3 0.0620071
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0618758
ZBTB38 zinc finger and BTB domain containing 38 0.0616013
MACF1 microtubule-actin crosslinking factor 1 0.0615036
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0612348
KYNU kynureninase 0.0601838
BICC1 BicC family RNA binding protein 1 0.0575697
DST dystonin 0.0575618
MARCKS myristoylated alanine-rich protein kinase C substrate 0.0571069
TMSB4X thymosin beta 4, X-linked 0.0559966
APLP2 amyloid beta (A4) precursor-like protein 2 0.0559886
TIPARP TCDD-inducible poly(ADP-ribose) polymerase 0.0555808
ASPH aspartate beta-hydroxylase 0.0547581
APP amyloid beta (A4) precursor protein 0.0526922
RND3 Rho family GTPase 3 0.0520003
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.051927
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 0.051919
HDAC9 histone deacetylase 9 0.051323
HMGA2 high mobility group AT-hook 2 0.0508094
UGCG UDP-glucose ceramide glucosyltransferase 0.0505762
PLIN2 perilipin 2 0.0499571
RPS4X ribosomal protein S4, X-linked 0.0489435
PGK1 phosphoglycerate kinase 1 0.0484519
NAP1L1 nucleosome assembly protein 1-like 1 0.0481868
CTSB cathepsin B 0.0481611
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 0.0479927
PARP14 poly (ADP-ribose) polymerase family, member 14 0.0479085
CALR calreticulin 0.0476797
FTH1 ferritin, heavy polypeptide 1 0.0461405
CANX calnexin 0.0453787
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0443097
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.044276
SQSTM1 sequestosome 1 0.0429398
TXNIP thioredoxin interacting protein 0.0426127
SMAD3 SMAD family member 3 0.0425419
VEGFA vascular endothelial growth factor A 0.0422804
B2M beta-2-microglobulin 0.0412368
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0404565
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0404435
EXT1 exostosin glycosyltransferase 1 0.040365
ZSWIM6 zinc finger, SWIM-type containing 6 0.0398967
THBS1 thrombospondin 1 0.0389798
SPARC secreted protein, acidic, cysteine-rich (osteonectin) 0.0388687
IRAK2 interleukin-1 receptor-associated kinase 2 0.0384611
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.038239
ARRDC3 arrestin domain containing 3 0.0377423
PNRC1 proline-rich nuclear receptor coactivator 1 0.0371013
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 0.0368944
HSPA8 heat shock 70kDa protein 8 0.0365923
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.0363808
ANXA2 annexin A2 0.0362985
USP9X ubiquitin specific peptidase 9, X-linked 0.0354546
FN1 fibronectin 1 0.0343175
ADM adrenomedullin 0.0335709
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0327203
CDH13 cadherin 13 0.0326107
MT1X metallothionein 1X 0.0323059
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) 0.0320037
SOX9 SRY (sex determining region Y)-box 9 0.0318642
SYNJ2 synaptojanin 2 0.0318517
THBS2 thrombospondin 2 0.0317859
PCBP2 poly(rC) binding protein 2 0.031756
SDC4 syndecan 4 0.0315226
EIF4A1 eukaryotic translation initiation factor 4A1 0.0305578
EIF1 eukaryotic translation initiation factor 1 0.0303209
OSBPL8 oxysterol binding protein-like 8 0.0292267
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0286849
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0285172
MYOF myoferlin 0.0279293
ARL4C ADP-ribosylation factor-like 4C 0.0277914
TRIM55 tripartite motif containing 55 0.0277528
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0275443
HLA-E major histocompatibility complex, class I, E 0.0272827
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0267872
CUL4B cullin 4B 0.0266875
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 0.0260434
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0259023
SFRP1 secreted frizzled-related protein 1 0.0257589
MXI1 MAX interactor 1, dimerization protein 0.0257117
WWTR1 WW domain containing transcription regulator 1 0.0255212
NHS Nance-Horan syndrome (congenital cataracts and dental anomalies) 0.0254154

decreased expression

Symbol Name Standardized Value
PDE10A phosphodiesterase 10A -0.0707126
IGFBP3 insulin-like growth factor binding protein 3 -0.0706428
NDRG1 N-myc downstream regulated 1 -0.0571516
EGR1 early growth response 1 -0.0468731
RTN4 reticulon 4 -0.0467281
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.038407
ZCCHC7 zinc finger, CCHC domain containing 7 -0.0375561
FRMD4A FERM domain containing 4A -0.036615
RPL37A ribosomal protein L37a -0.0357037
SBF2 SET binding factor 2 -0.0310015
RPL35A ribosomal protein L35a -0.03044
MKI67 marker of proliferation Ki-67 -0.0297753
RPS3 ribosomal protein S3 -0.0269013
CENPF centromere protein F, 350/400kDa -0.0267929
JMJD1C jumonji domain containing 1C -0.0265978
TGFBI transforming growth factor, beta-induced, 68kDa -0.0263938
UBE2E2 ubiquitin-conjugating enzyme E2E 2 -0.0262323
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0262314
RPL31 ribosomal protein L31 -0.0261777
SLC38A2 solute carrier family 38, member 2 -0.0260143
RPL9 ribosomal protein L9 -0.0258101
RPLP2 ribosomal protein, large, P2 -0.0251361
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0248805
RPS17 ribosomal protein S17 -0.0245643
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0243255
ATXN1 ataxin 1 -0.0241917
TIMP2 TIMP metallopeptidase inhibitor 2 -0.0236734
CTSD cathepsin D -0.0236609
RPS13 ribosomal protein S13 -0.0226643
NF1 neurofibromin 1 -0.0222445
TMSB10 thymosin beta 10 -0.0222116
SMC4 structural maintenance of chromosomes 4 -0.0216234
TAS2R14 taste receptor, type 2, member 14 -0.0216176
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0215126
NABP1 nucleic acid binding protein 1 -0.0211403
CEP95 centrosomal protein 95kDa -0.0207872
MARCHF7 membrane associated ring-CH-type finger 7 -0.0202963
METTL15 methyltransferase like 15 -0.0198382
KIF4A kinesin family member 4A -0.0194909
ANKIB1 ankyrin repeat and IBR domain containing 1 -0.0193499
SUPT3H suppressor of Ty 3 homolog (S. cerevisiae) -0.0192792
CLIC4 chloride intracellular channel 4 -0.0192307
PAPPA pregnancy-associated plasma protein A, pappalysin 1 -0.0189161
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.0186977
RPS12 ribosomal protein S12 -0.0186396
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.0184733
PTMA prothymosin, alpha -0.0184659
TRPC4AP transient receptor potential cation channel, subfamily C, member 4 associated protein -0.0183974
RPS25 ribosomal protein S25 -0.0183659
RPL36 ribosomal protein L36 -0.0179373
RPS29 ribosomal protein S29 -0.0178326
COL8A1 collagen, type VIII, alpha 1 -0.0178112
ZFAND3 zinc finger, AN1-type domain 3 -0.0176466
ATXN2 ataxin 2 -0.017405
TRPC1 transient receptor potential cation channel, subfamily C, member 1 -0.0173312
SCARB1 scavenger receptor class B, member 1 -0.017193
SETD5 SET domain containing 5 -0.0169872
TAPBP TAP binding protein (tapasin) -0.0169269
KMT2C lysine (K)-specific methyltransferase 2C -0.0167002
RPS16 ribosomal protein S16 -0.0165664
PLEKHA5 pleckstrin homology domain containing, family A member 5 -0.016513
LRRC7 leucine rich repeat containing 7 -0.0157734
ITCH itchy E3 ubiquitin protein ligase -0.0157693
KLF7 Kruppel-like factor 7 (ubiquitous) -0.0157427
YEATS2 YEATS domain containing 2 -0.0157349
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0157073
FRMD5 FERM domain containing 5 -0.0156828
COG5 component of oligomeric golgi complex 5 -0.0156401
AKT3 v-akt murine thymoma viral oncogene homolog 3 -0.0154864
FRMPD4 FERM and PDZ domain containing 4 -0.0154135
TPX2 TPX2, microtubule-associated -0.0154029
SAMD4A sterile alpha motif domain containing 4A -0.015349
CASK calcium/calmodulin-dependent serine protein kinase (MAGUK family) -0.0153231
RPL13A ribosomal protein L13a -0.0151078
GGNBP2 gametogenetin binding protein 2 -0.0149192
FBXL2 F-box and leucine-rich repeat protein 2 -0.0149055
RPS19 ribosomal protein S19 -0.014879
ARF4 ADP-ribosylation factor 4 -0.0148243
WDR44 WD repeat domain 44 -0.0148051
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0147036
RAD51B RAD51 paralog B -0.014632
MYO9A myosin IXA -0.0146202
RASA2 RAS p21 protein activator 2 -0.0145023
SLC41A2 solute carrier family 41 (magnesium transporter), member 2 -0.0144135
TMEM41B transmembrane protein 41B -0.0142917
ADAM12 ADAM metallopeptidase domain 12 -0.014113
RBCK1 RanBP-type and C3HC4-type zinc finger containing 1 -0.0141074
DIAPH2 diaphanous-related formin 2 -0.0140563
TBC1D22A TBC1 domain family, member 22A -0.0139474
DNAAF9 dynein axonemal assembly factor 9 -0.0138912
RPS27 ribosomal protein S27 -0.013852
MAP1B microtubule-associated protein 1B -0.0138311
RPS24 ribosomal protein S24 -0.0137391
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0136724
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0136365
DIAPH3 diaphanous-related formin 3 -0.0136013
KLHL24 kelch-like family member 24 -0.0135398
ARID2 AT rich interactive domain 2 (ARID, RFX-like) -0.0135363
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.01344
MON2 MON2 homolog (S. cerevisiae) -0.0132648