ETC-206_SW48 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description ETC-206 perturbation in SW48 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the ETC-206_SW48 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.249328
ACTG1 actin gamma 1 0.172819
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.102102
RCOR1 REST corepressor 1 0.0909474
HMGA2 high mobility group AT-hook 2 0.0826246
HSPA8 heat shock 70kDa protein 8 0.0767206
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0742213
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0698424
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0634475
POTEF POTE ankyrin domain family, member F 0.0633242
RPL3 ribosomal protein L3 0.0594169
AHNAK AHNAK nucleoprotein 0.0526663
EEF2 eukaryotic translation elongation factor 2 0.0505538
LAMA4 laminin, alpha 4 0.047713
LOC102724023 ES1 protein homolog, mitochondrial 0.0446504
FAT1 FAT atypical cadherin 1 0.0436628
FOS FBJ murine osteosarcoma viral oncogene homolog 0.0428239
ENO1 enolase 1, (alpha) 0.0401622
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0390288
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0387073
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme 0.0385625
GPC5 glypican 5 0.0380493
CPOX coproporphyrinogen oxidase 0.0377843
SGMS2 sphingomyelin synthase 2 0.03619
SEPTIN9 septin 9 0.0359567
NUP50 nucleoporin 50kDa 0.0347839
HOMER1 homer scaffolding protein 1 0.0340505
ZSWIM6 zinc finger, SWIM-type containing 6 0.0334416
SRRM2 serine/arginine repetitive matrix 2 0.0321797
SNX9 sorting nexin 9 0.0318707
GATAD2A GATA zinc finger domain containing 2A 0.0315072
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0314102
EFNB2 ephrin-B2 0.0312738
RPS12 ribosomal protein S12 0.0308781
EZR ezrin 0.0304869
DSPP dentin sialophosphoprotein 0.0303369
PCBP2 poly(rC) binding protein 2 0.0302948
FHL2 four and a half LIM domains 2 0.0298728
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0298707
MPRIP myosin phosphatase Rho interacting protein 0.0292749
CCSER1 coiled-coil serine-rich protein 1 0.0290973
APLP2 amyloid beta (A4) precursor-like protein 2 0.0290797
IGSF9B immunoglobulin superfamily, member 9B 0.0289371
AKAP13 A kinase (PRKA) anchor protein 13 0.0288988
SMAD3 SMAD family member 3 0.0287027
JARID2 jumonji, AT rich interactive domain 2 0.028271
DOCK5 dedicator of cytokinesis 5 0.0282068
USP9X ubiquitin specific peptidase 9, X-linked 0.0274156
MYH9 myosin, heavy chain 9, non-muscle 0.0270818
SORL1 sortilin-related receptor, L(DLR class) A repeats containing 0.0269686
CLIP2 CAP-GLY domain containing linker protein 2 0.0265295
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0253013
EIF4B eukaryotic translation initiation factor 4B 0.0248081
ABR active BCR-related 0.0246767
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 0.0241898
SH3RF2 SH3 domain containing ring finger 2 0.0236442
EGFR epidermal growth factor receptor 0.0235705
MACF1 microtubule-actin crosslinking factor 1 0.0232898
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0227127
CMIP c-Maf inducing protein 0.0227067
RPL4 ribosomal protein L4 0.0226787
CLDND1 claudin domain containing 1 0.0224789
ITGA6 integrin, alpha 6 0.0224713
ZFP36L2 ZFP36 ring finger protein-like 2 0.0216907
SET SET nuclear proto-oncogene 0.021658
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0214912
CENPF centromere protein F, 350/400kDa 0.0214831
SLCO1B3-SLCO1B7 SLCO1B3-SLCO1B7 readthrough 0.0209984
RASAL2 RAS protein activator like 2 0.0207746
ZFP36L1 ZFP36 ring finger protein-like 1 0.0207723
ARHGEF1 Rho guanine nucleotide exchange factor (GEF) 1 0.0207138
VCL vinculin 0.0205926
DUSP4 dual specificity phosphatase 4 0.0204863
HNRNPR heterogeneous nuclear ribonucleoprotein R 0.020161
TPM4 tropomyosin 4 0.0201001
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0199824
EGR1 early growth response 1 0.0187979
RPS3 ribosomal protein S3 0.0187393
LAMB3 laminin, beta 3 0.018717
EIF4A1 eukaryotic translation initiation factor 4A1 0.018612
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0186048
FHIT fragile histidine triad 0.018545
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 0.0184843
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0184364
MAN1A1 mannosidase, alpha, class 1A, member 1 0.0183141
OSBPL10 oxysterol binding protein-like 10 0.0183135
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0182664
MBOAT2 membrane bound O-acyltransferase domain containing 2 0.0180551
ENO2 enolase 2 (gamma, neuronal) 0.017999
ANXA2 annexin A2 0.0177502
ARHGAP42 Rho GTPase activating protein 42 0.0177259
CREB5 cAMP responsive element binding protein 5 0.0176988
RAP1GAP2 RAP1 GTPase activating protein 2 0.0174161
FOSL1 FOS-like antigen 1 0.0173178
FAM120A family with sequence similarity 120A 0.0172644
LPP LIM domain containing preferred translocation partner in lipoma 0.0170231
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 0.0168158
BCL9L B-cell CLL/lymphoma 9-like 0.0168086
TIPARP TCDD-inducible poly(ADP-ribose) polymerase 0.0166444
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0164068

decreased expression

Symbol Name Standardized Value
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.218873
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.209809
CD36 CD36 molecule (thrombospondin receptor) -0.144259
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.123092
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 -0.105029
OXR1 oxidation resistance 1 -0.0928367
TMSB10 thymosin beta 10 -0.0803547
IER3 immediate early response 3 -0.0793293
PTMA prothymosin, alpha -0.0780594
AREG amphiregulin -0.0739425
RPS24 ribosomal protein S24 -0.0705426
TXNRD1 thioredoxin reductase 1 -0.0604572
RPS6 ribosomal protein S6 -0.060365
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0600751
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha -0.0588445
RNF43 ring finger protein 43 -0.0584337
GOLGA4 golgin A4 -0.0574527
LMO7 LIM domain 7 -0.0562936
RUNX2 runt-related transcription factor 2 -0.0520724
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0505614
TOP1 topoisomerase (DNA) I -0.0498522
GARS1 glycyl-tRNA synthetase 1 -0.0491648
RPL35A ribosomal protein L35a -0.0482935
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b -0.0465286
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0460239
SERINC5 serine incorporator 5 -0.045338
TPT1 tumor protein, translationally-controlled 1 -0.0449567
COG5 component of oligomeric golgi complex 5 -0.0443982
PDE4B phosphodiesterase 4B, cAMP-specific -0.0410313
USP3 ubiquitin specific peptidase 3 -0.0402047
PPP2R5E protein phosphatase 2, regulatory subunit B', epsilon isoform -0.0396944
ZMYM2 zinc finger, MYM-type 2 -0.0387938
MARK3 MAP/microtubule affinity-regulating kinase 3 -0.0387342
RPL12 ribosomal protein L12 -0.0371011
MAP4K5 mitogen-activated protein kinase kinase kinase kinase 5 -0.0365329
S100A10 S100 calcium binding protein A10 -0.0363762
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0361614
NF1 neurofibromin 1 -0.0356289
IARS1 isoleucyl-tRNA synthetase 1 -0.0349486
PTBP2 polypyrimidine tract binding protein 2 -0.0348168
ITPRID2 ITPR interacting domain containing 2 -0.0343797
SLMAP sarcolemma associated protein -0.0343369
KDM3A lysine (K)-specific demethylase 3A -0.0343312
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase -0.0341847
STRN3 striatin, calmodulin binding protein 3 -0.0332768
PAN3 PAN3 poly(A) specific ribonuclease subunit -0.0329801
OSBPL3 oxysterol binding protein-like 3 -0.0326873
ASNS asparagine synthetase (glutamine-hydrolyzing) -0.0318404
RBM25 RNA binding motif protein 25 -0.0318259
RPL11 ribosomal protein L11 -0.031611
NPEPPS aminopeptidase puromycin sensitive -0.0313262
PALS2 protein associated with LIN7 2, MAGUK p55 family member -0.0309074
MAP4 microtubule-associated protein 4 -0.0303263
NEMF nuclear export mediator factor -0.030148
RBM39 RNA binding motif protein 39 -0.0301192
ATP11B ATPase, class VI, type 11B -0.0298741
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0297664
RPL34 ribosomal protein L34 -0.0297633
MTAP methylthioadenosine phosphorylase -0.0295342
RPS19 ribosomal protein S19 -0.0294316
CMSS1 cms1 ribosomal small subunit homolog (yeast) -0.0293754
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.0292856
RPL8 ribosomal protein L8 -0.0289539
CLTC clathrin, heavy chain (Hc) -0.0288951
PUM2 pumilio RNA-binding family member 2 -0.0281841
SLC25A36 solute carrier family 25 (pyrimidine nucleotide carrier), member 36 -0.0278168
NEK7 NIMA-related kinase 7 -0.0277469
RNF145 ring finger protein 145 -0.0276232
KDM6A lysine (K)-specific demethylase 6A -0.0274109
RPS6KA3 ribosomal protein S6 kinase, 90kDa, polypeptide 3 -0.0270828
SBF2 SET binding factor 2 -0.0269818
RPL32 ribosomal protein L32 -0.0269225
FNDC3B fibronectin type III domain containing 3B -0.0267872
G2E3 G2/M-phase specific E3 ubiquitin protein ligase -0.026512
HDAC2 histone deacetylase 2 -0.0263703
KMT2C lysine (K)-specific methyltransferase 2C -0.0263602
OGA O-GlcNAcase -0.0263088
NAMPT nicotinamide phosphoribosyltransferase -0.0263087
RLF rearranged L-myc fusion -0.0261853
RPS15 ribosomal protein S15 -0.0261459
RICTOR RPTOR independent companion of MTOR, complex 2 -0.0261119
RPLP1 ribosomal protein, large, P1 -0.0260685
MARCHF6 membrane associated ring-CH-type finger 6 -0.0260652
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0259296
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0258983
RALGPS2 Ral GEF with PH domain and SH3 binding motif 2 -0.0258089
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0256624
NCOR1 nuclear receptor corepressor 1 -0.0255777
MT2A metallothionein 2A -0.0255399
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0250483
WAC WW domain containing adaptor with coiled-coil -0.0250283
FOXO1 forkhead box O1 -0.0245629
ANAPC5 anaphase promoting complex subunit 5 -0.0242826
ZNF292 zinc finger protein 292 -0.0242807
PIK3C2A phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha -0.0242651
HILPDA hypoxia inducible lipid droplet-associated -0.0241523
ARHGAP32 Rho GTPase activating protein 32 -0.0241413
RPLP2 ribosomal protein, large, P2 -0.0238657
FERMT1 fermitin family member 1 -0.0238488
ANKRD28 ankyrin repeat domain 28 -0.0236886