EX229_A-427 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description EX229 perturbation in A-427 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the EX229_A-427 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.260786
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.223901
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.117684
SERPINB2 serpin peptidase inhibitor, clade B (ovalbumin), member 2 0.100263
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0980202
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0895727
EEF2 eukaryotic translation elongation factor 2 0.0822067
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0729273
ADIPOR2 adiponectin receptor 2 0.0709171
PCBP2 poly(rC) binding protein 2 0.0692561
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0690233
RAB7A RAB7A, member RAS oncogene family 0.0616434
ASPH aspartate beta-hydroxylase 0.0606016
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0595105
ENO1 enolase 1, (alpha) 0.0582581
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0565241
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0559135
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 0.0541313
IPO7 importin 7 0.0530722
TPM3 tropomyosin 3 0.0527296
USP34 ubiquitin specific peptidase 34 0.0520048
LRPPRC leucine-rich pentatricopeptide repeat containing 0.0514288
EIF4A2 eukaryotic translation initiation factor 4A2 0.0499255
MACF1 microtubule-actin crosslinking factor 1 0.0489427
DST dystonin 0.048672
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0481621
FXR1 fragile X mental retardation, autosomal homolog 1 0.0478782
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0468083
HSPA8 heat shock 70kDa protein 8 0.0466701
EIF4B eukaryotic translation initiation factor 4B 0.0465385
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0462444
FAT1 FAT atypical cadherin 1 0.0460182
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.045811
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0443818
XPOT exportin, tRNA 0.0434016
PSMD2 proteasome (prosome, macropain) 26S subunit, non-ATPase, 2 0.0433198
TXNRD1 thioredoxin reductase 1 0.043237
FNIP1 folliculin interacting protein 1 0.0419279
PCDH9 protocadherin 9 0.0415676
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0412188
SERBP1 SERPINE1 mRNA binding protein 1 0.041129
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.041029
ARRDC3 arrestin domain containing 3 0.0399378
HDAC9 histone deacetylase 9 0.0398098
CCT5 chaperonin containing TCP1, subunit 5 (epsilon) 0.0395719
HSPA4 heat shock 70kDa protein 4 0.0394351
BRD2 bromodomain containing 2 0.0393097
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0388852
NAP1L1 nucleosome assembly protein 1-like 1 0.0385642
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.0376568
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.0366863
USP9X ubiquitin specific peptidase 9, X-linked 0.0354757
ANXA1 annexin A1 0.0352605
DSCAM Down syndrome cell adhesion molecule 0.0350171
CLTC clathrin, heavy chain (Hc) 0.0349338
SPAG9 sperm associated antigen 9 0.0347401
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0342407
DIP2B DIP2 disco-interacting protein 2 homolog B (Drosophila) 0.0339505
FUBP1 far upstream element (FUSE) binding protein 1 0.0334567
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0329207
SET SET nuclear proto-oncogene 0.0327203
PANK3 pantothenate kinase 3 0.0316803
CCT6A chaperonin containing TCP1, subunit 6A (zeta 1) 0.0296312
SLC38A1 solute carrier family 38, member 1 0.029104
YAP1 Yes-associated protein 1 0.0290523
VTI1A vesicle transport through interaction with t-SNAREs 1A 0.0289769
LRMDA leucine rich melanocyte differentiation associated 0.0289179
PEG10 paternally expressed 10 0.0285989
PDIA3 protein disulfide isomerase family A, member 3 0.02842
USP14 ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase) 0.0282946
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0281177
NSUN2 NOP2/Sun RNA methyltransferase family, member 2 0.0279857
VMP1 vacuole membrane protein 1 0.0275942
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0274268
CANX calnexin 0.0272542
DSPP dentin sialophosphoprotein 0.0271415
RPL11 ribosomal protein L11 0.0266631
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0266528
AKAP12 A kinase (PRKA) anchor protein 12 0.0265653
AFF4 AF4/FMR2 family, member 4 0.0261205
LDHA lactate dehydrogenase A 0.0259097
UHMK1 U2AF homology motif (UHM) kinase 1 0.0257804
EPHA6 EPH receptor A6 0.0255508
HNRNPM heterogeneous nuclear ribonucleoprotein M 0.0255123
ERRFI1 ERBB receptor feedback inhibitor 1 0.0254252
EEF1G eukaryotic translation elongation factor 1 gamma 0.0249737
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0249297
ANK2 ankyrin 2, neuronal 0.024903
GSK3B glycogen synthase kinase 3 beta 0.0246694
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0244845
WDR43 WD repeat domain 43 0.024407
TFG TRK-fused gene 0.0242424
SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 0.0238215
TAF7 TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa 0.0237067
WWOX WW domain containing oxidoreductase 0.0236644
HNRNPH3 heterogeneous nuclear ribonucleoprotein H3 (2H9) 0.0236113
GPBP1 GC-rich promoter binding protein 1 0.0235859
CPOX coproporphyrinogen oxidase 0.0235372
PRRC2C proline-rich coiled-coil 2C 0.0234426
APP amyloid beta (A4) precursor protein 0.0232374

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.174722
TMSB10 thymosin beta 10 -0.170093
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.161908
ZBTB20 zinc finger and BTB domain containing 20 -0.114259
NLGN1 neuroligin 1 -0.103152
MYL12B myosin, light chain 12B, regulatory -0.102629
FTL ferritin, light polypeptide -0.0854161
DPYD dihydropyrimidine dehydrogenase -0.0797313
CELF2 CUGBP, Elav-like family member 2 -0.0739482
YBX3 Y box binding protein 3 -0.0631936
DLC1 DLC1 Rho GTPase activating protein -0.0631478
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0580877
SLC38A2 solute carrier family 38, member 2 -0.0550201
ERBB4 erb-b2 receptor tyrosine kinase 4 -0.05457
CNRIP1 cannabinoid receptor interacting protein 1 -0.0531617
BCAS3 breast carcinoma amplified sequence 3 -0.0530622
RPLP1 ribosomal protein, large, P1 -0.0524641
ACTG1 actin gamma 1 -0.0493936
LMO7 LIM domain 7 -0.0488246
ALDH1A1 aldehyde dehydrogenase 1 family, member A1 -0.0484618
PFN1 profilin 1 -0.0449078
SYT1 synaptotagmin I -0.0445247
BIRC6 baculoviral IAP repeat containing 6 -0.0442946
CCN2 cellular communication network factor 2 -0.0427644
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) -0.0417512
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0401515
CUBN cubilin (intrinsic factor-cobalamin receptor) -0.0401231
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0391424
EDARADD EDAR-associated death domain -0.0391196
PTMA prothymosin, alpha -0.0383258
CLDN1 claudin 1 -0.0374592
FBXL20 F-box and leucine-rich repeat protein 20 -0.03654
RPS24 ribosomal protein S24 -0.0347352
EGR1 early growth response 1 -0.034409
ZNF804A zinc finger protein 804A -0.0340336
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0335525
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0323596
PTMS parathymosin -0.032226
GNAS GNAS complex locus -0.0320318
NR5A2 nuclear receptor subfamily 5, group A, member 2 -0.0317672
RPL35A ribosomal protein L35a -0.0306082
FBXO11 F-box protein 11 -0.0305379
PDE4D phosphodiesterase 4D, cAMP-specific -0.0304684
RPS8 ribosomal protein S8 -0.0301766
TFDP2 transcription factor Dp-2 (E2F dimerization partner 2) -0.0301672
HMGA1 high mobility group AT-hook 1 -0.030054
HSPB1 heat shock 27kDa protein 1 -0.0300241
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0294471
CCND1 cyclin D1 -0.0293165
SMC4 structural maintenance of chromosomes 4 -0.0290393
RASAL2 RAS protein activator like 2 -0.028988
H1-0 H1.0 linker histone -0.028987
RPS19 ribosomal protein S19 -0.0289808
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0288507
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) -0.0285549
EDN1 endothelin 1 -0.0283218
CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 -0.0275043
FSTL5 follistatin-like 5 -0.0272649
CARD16 caspase recruitment domain family, member 16 -0.0272111
TMEM123 transmembrane protein 123 -0.0269022
ROCK2 Rho-associated, coiled-coil containing protein kinase 2 -0.0268745
S100A6 S100 calcium binding protein A6 -0.0266277
KLHL24 kelch-like family member 24 -0.026396
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.0263558
MGAT4C MGAT4 family, member C -0.0260045
AKT3 v-akt murine thymoma viral oncogene homolog 3 -0.0258205
NCEH1 neutral cholesterol ester hydrolase 1 -0.0254237
RPS6KA5 ribosomal protein S6 kinase, 90kDa, polypeptide 5 -0.0252743
PACS1 phosphofurin acidic cluster sorting protein 1 -0.0251836
RPL37 ribosomal protein L37 -0.024664
PCDH7 protocadherin 7 -0.0246426
LOC112694756 uncharaterized LOC112694756 -0.0246092
VGLL4 vestigial-like family member 4 -0.0245803
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.024467
CAVIN1 caveolae associated protein 1 -0.0243216
ATP5F1B ATP synthase F1 subunit beta -0.0241624
UBE2D2 ubiquitin-conjugating enzyme E2D 2 -0.0241148
PRR16 proline rich 16 -0.0239551
ABI2 abl-interactor 2 -0.023811
DKK1 dickkopf WNT signaling pathway inhibitor 1 -0.0237385
RPL36 ribosomal protein L36 -0.0236653
SNCA synuclein, alpha (non A4 component of amyloid precursor) -0.0235195
MAML3 mastermind-like 3 (Drosophila) -0.0233102
UBE2E2 ubiquitin-conjugating enzyme E2E 2 -0.0232236
KLF6 Kruppel-like factor 6 -0.0231488
ANKRD28 ankyrin repeat domain 28 -0.0229363
RPL34 ribosomal protein L34 -0.0222008
RPL26 ribosomal protein L26 -0.0218779
PPDPF pancreatic progenitor cell differentiation and proliferation factor -0.0218581
AHNAK AHNAK nucleoprotein -0.0212676
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0210021
LATS2 large tumor suppressor kinase 2 -0.020905
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0206954
RPS21 ribosomal protein S21 -0.0201921
SPIDR scaffolding protein involved in DNA repair -0.0199381
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) -0.0197929
VCL vinculin -0.0197566
PPP3R1 protein phosphatase 3, regulatory subunit B, alpha -0.0195569
RPL27A ribosomal protein L27a -0.0193279
NFE2L2 nuclear factor, erythroid 2-like 2 -0.0192615