EX229_COLO 205 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description EX229 perturbation in COLO 205 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the EX229_COLO 205 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
LMO7 LIM domain 7 0.231245
TPT1 tumor protein, translationally-controlled 1 0.144043
EXT1 exostosin glycosyltransferase 1 0.131455
DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3 0.13142
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.125283
INTS6 integrator complex subunit 6 0.124074
FNDC3B fibronectin type III domain containing 3B 0.123318
GCLC glutamate-cysteine ligase, catalytic subunit 0.119808
SMAD3 SMAD family member 3 0.106301
ASPH aspartate beta-hydroxylase 0.103507
AKAP13 A kinase (PRKA) anchor protein 13 0.102011
PDIA3 protein disulfide isomerase family A, member 3 0.100084
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0978441
RAB7A RAB7A, member RAS oncogene family 0.0944849
CANX calnexin 0.0903572
ZSWIM6 zinc finger, SWIM-type containing 6 0.0872424
ZNF292 zinc finger protein 292 0.0808948
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0785991
B2M beta-2-microglobulin 0.0758016
HKDC1 hexokinase domain containing 1 0.0745915
ANXA2 annexin A2 0.0745741
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0735309
GOLGB1 golgin B1 0.0733492
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.071899
ENO1 enolase 1, (alpha) 0.070577
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0674745
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0667927
DST dystonin 0.0659339
GULP1 GULP, engulfment adaptor PTB domain containing 1 0.0656918
RNF213 ring finger protein 213 0.0629257
TM4SF19 transmembrane 4 L six family member 19 0.0624133
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0613303
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0612595
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0609609
GMDS GDP-mannose 4,6-dehydratase 0.0595477
PDZD8 PDZ domain containing 8 0.0590967
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0586579
FTL ferritin, light polypeptide 0.0579819
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0578244
GOLGA4 golgin A4 0.0572765
FNIP1 folliculin interacting protein 1 0.0572051
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0564181
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0560708
RPL23 ribosomal protein L23 0.0534506
EFNB2 ephrin-B2 0.0522121
TOP1 topoisomerase (DNA) I 0.0518136
SEPTIN9 septin 9 0.0499471
DSCAM Down syndrome cell adhesion molecule 0.0484272
MCTP1 multiple C2 domains, transmembrane 1 0.0481967
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0470382
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0469702
CXCL8 chemokine (C-X-C motif) ligand 8 0.0467694
SIK3 SIK family kinase 3 0.0465449
DIP2B DIP2 disco-interacting protein 2 homolog B (Drosophila) 0.0464546
DIAPH1 diaphanous-related formin 1 0.0461805
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 0.0446374
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0446368
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0444098
HCN1 hyperpolarization activated cyclic nucleotide gated potassium channel 1 0.0443229
ERN1 endoplasmic reticulum to nucleus signaling 1 0.0434931
MYO10 myosin X 0.0434918
APLP2 amyloid beta (A4) precursor-like protein 2 0.04272
PRRC2C proline-rich coiled-coil 2C 0.0424874
JMJD1C jumonji domain containing 1C 0.042227
ALCAM activated leukocyte cell adhesion molecule 0.04194
SPAG9 sperm associated antigen 9 0.0413294
LDHA lactate dehydrogenase A 0.0402208
PADI1 peptidyl arginine deiminase, type I 0.0401297
KYNU kynureninase 0.040042
PMM2 phosphomannomutase 2 0.0399842
SIPA1L2 signal-induced proliferation-associated 1 like 2 0.0398409
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0395302
HM13 histocompatibility (minor) 13 0.0393235
RFFL ring finger and FYVE-like domain containing E3 ubiquitin protein ligase 0.0389235
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.038837
FNIP2 folliculin interacting protein 2 0.0386267
SFTPA2 surfactant protein A2 0.0386159
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0382427
MSI2 musashi RNA-binding protein 2 0.0381588
TRIM2 tripartite motif containing 2 0.0379925
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0376697
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0373301
MYO5B myosin VB 0.0371642
FNDC3A fibronectin type III domain containing 3A 0.0369668
HSPH1 heat shock 105kDa/110kDa protein 1 0.0364171
SQSTM1 sequestosome 1 0.0359631
RPS8 ribosomal protein S8 0.0351341
AREG amphiregulin 0.0350519
MACC1 metastasis associated in colon cancer 1 0.0350108
FAT1 FAT atypical cadherin 1 0.0350026
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0349962
DSPP dentin sialophosphoprotein 0.0345583
TMC5 transmembrane channel-like 5 0.0344067
MCU mitochondrial calcium uniporter 0.0341045
RAB10 RAB10, member RAS oncogene family 0.0333513
CYP3A5 cytochrome P450, family 3, subfamily A, polypeptide 5 0.0333052
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0330026
SEC31A SEC31 homolog A (S. cerevisiae) 0.032794
CLTC clathrin, heavy chain (Hc) 0.0327874
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0325911

decreased expression

Symbol Name Standardized Value
ZMYND8 zinc finger, MYND-type containing 8 -0.121629
ZBTB20 zinc finger and BTB domain containing 20 -0.0775682
VCL vinculin -0.07089
EGR1 early growth response 1 -0.0588093
NDRG1 N-myc downstream regulated 1 -0.0529793
ELF3 E74-like factor 3 (ets domain transcription factor, epithelial-specific ) -0.0527606
RNF43 ring finger protein 43 -0.0498025
TXNIP thioredoxin interacting protein -0.0450354
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0441879
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0408867
BICRAL BICRA like chromatin remodeling complex associated protein -0.0406201
TMEM62 transmembrane protein 62 -0.0402615
NCKAP5 NCK-associated protein 5 -0.039451
SNTB1 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) -0.0392608
PARP4 poly (ADP-ribose) polymerase family, member 4 -0.0376003
GCC2 GRIP and coiled-coil domain containing 2 -0.0372275
H1-0 H1.0 linker histone -0.0371517
NPSR1 neuropeptide S receptor 1 -0.0354882
HLA-B major histocompatibility complex, class I, B -0.0350164
MECOM MDS1 and EVI1 complex locus -0.0342007
WSB1 WD repeat and SOCS box containing 1 -0.0337407
TC2N tandem C2 domains, nuclear -0.033739
DIAPH3 diaphanous-related formin 3 -0.0324065
BTBD9 BTB (POZ) domain containing 9 -0.0306254
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 -0.0305182
LYZ lysozyme -0.0297883
ATP10B ATPase, class V, type 10B -0.0292044
PTBP3 polypyrimidine tract binding protein 3 -0.0290437
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0286643
ACTN4 actinin, alpha 4 -0.0281578
PLSCR1 phospholipid scramblase 1 -0.0281386
NCOA7 nuclear receptor coactivator 7 -0.0279427
TUFT1 tuftelin 1 -0.0274993
TNS4 tensin 4 -0.0272378
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0269919
FOXP1 forkhead box P1 -0.0269167
PHF3 PHD finger protein 3 -0.0268595
NRIP1 nuclear receptor interacting protein 1 -0.0265482
LLGL2 lethal giant larvae homolog 2 (Drosophila) -0.0262265
KLF3 Kruppel-like factor 3 (basic) -0.025964
JUP junction plakoglobin -0.0258513
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 -0.0257661
NAALADL2 N-acetylated alpha-linked acidic dipeptidase-like 2 -0.0254503
SREBF2 sterol regulatory element binding transcription factor 2 -0.025253
ZDHHC20 zinc finger, DHHC-type containing 20 -0.0248453
KLHL24 kelch-like family member 24 -0.0247188
CPEB4 cytoplasmic polyadenylation element binding protein 4 -0.0246831
BRCA2 breast cancer 2, early onset -0.024579
SAMD12 sterile alpha motif domain containing 12 -0.0244534
MYO1E myosin IE -0.0241448
RABGAP1L RAB GTPase activating protein 1-like -0.0241002
ZMYM2 zinc finger, MYM-type 2 -0.0240587
MEIS2 Meis homeobox 2 -0.0240436
MUC20 mucin 20, cell surface associated -0.0238531
EPSTI1 epithelial stromal interaction 1 (breast) -0.0237573
PAN3 PAN3 poly(A) specific ribonuclease subunit -0.0233146
RIGI RNA sensor RIG-I -0.0232052
NECTIN2 nectin cell adhesion molecule 2 -0.0230648
BCAS3 breast carcinoma amplified sequence 3 -0.0223967
OASL 2'-5'-oligoadenylate synthetase-like -0.0221964
NT5C2 5'-nucleotidase, cytosolic II -0.021968
IL20RA interleukin 20 receptor, alpha -0.0218741
MPHOSPH8 M-phase phosphoprotein 8 -0.0218634
PATJ PATJ crumbs cell polarity complex component -0.0216531
PCK1 phosphoenolpyruvate carboxykinase 1 (soluble) -0.0216239
OGA O-GlcNAcase -0.0211341
SPATS2L spermatogenesis associated, serine-rich 2-like -0.0211286
SMC4 structural maintenance of chromosomes 4 -0.0209259
DNAJC15 DnaJ (Hsp40) homolog, subfamily C, member 15 -0.0208408
MX2 MX dynamin-like GTPase 2 -0.0207548
FOXO3 forkhead box O3 -0.0207242
MT1X metallothionein 1X -0.0205303
IRF2BP2 interferon regulatory factor 2 binding protein 2 -0.0204764
FMN1 formin 1 -0.0204483
ELF2 E74-like factor 2 (ets domain transcription factor) -0.0204441
CCNL1 cyclin L1 -0.0198945
EZR ezrin -0.0198164
MAP2K6 mitogen-activated protein kinase kinase 6 -0.0197775
ERBB3 erb-b2 receptor tyrosine kinase 3 -0.0194519
SCAPER S-phase cyclin A-associated protein in the ER -0.0193964
IFT88 intraflagellar transport 88 -0.0193895
MKI67 marker of proliferation Ki-67 -0.0189892
SLC2A12 solute carrier family 2 (facilitated glucose transporter), member 12 -0.0187334
SMIM14 small integral membrane protein 14 -0.0187271
HMGB1 high mobility group box 1 -0.0186857
UTY ubiquitously transcribed tetratricopeptide repeat containing, Y-linked -0.0186553
KDM3A lysine (K)-specific demethylase 3A -0.0186278
HDAC8 histone deacetylase 8 -0.018477
PTEN phosphatase and tensin homolog -0.0183979
IGF1R insulin-like growth factor 1 receptor -0.0182554
GRAMD2B GRAM domain containing 2B -0.0176989
SPINT1 serine peptidase inhibitor, Kunitz type 1 -0.0176842
TMPRSS4 transmembrane protease, serine 4 -0.0176798
LASP1 LIM and SH3 protein 1 -0.0175319
TPM4 tropomyosin 4 -0.0174192
FUT8 fucosyltransferase 8 (alpha (1,6) fucosyltransferase) -0.0173495
ALPK1 alpha-kinase 1 -0.0172066
RAD51B RAD51 paralog B -0.0170683
RAPGEF5 Rap guanine nucleotide exchange factor (GEF) 5 -0.0170624
ITPKC inositol-trisphosphate 3-kinase C -0.0170594