EX229_LS 180 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description EX229 perturbation in LS 180 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the EX229_LS 180 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.230787
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.147579
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 0.143439
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.138592
LDHA lactate dehydrogenase A 0.119111
ASPH aspartate beta-hydroxylase 0.103002
ENO1 enolase 1, (alpha) 0.095426
EXT1 exostosin glycosyltransferase 1 0.0934177
TPT1 tumor protein, translationally-controlled 1 0.0812956
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0802852
DSPP dentin sialophosphoprotein 0.0773762
MED13 mediator complex subunit 13 0.0760635
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0746842
HSPA8 heat shock 70kDa protein 8 0.0724459
AFF1 AF4/FMR2 family, member 1 0.0720094
AHNAK AHNAK nucleoprotein 0.0711903
EEF2 eukaryotic translation elongation factor 2 0.0705064
KRT18 keratin 18, type I 0.06782
TTC3 tetratricopeptide repeat domain 3 0.0655219
GMDS GDP-mannose 4,6-dehydratase 0.0629831
ITGA6 integrin, alpha 6 0.0618706
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0608176
PDIA3 protein disulfide isomerase family A, member 3 0.0606224
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0567572
CANX calnexin 0.0561545
CALR calreticulin 0.0551042
LMO7 LIM domain 7 0.054592
HDLBP high density lipoprotein binding protein 0.052821
PDZD8 PDZ domain containing 8 0.0526329
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0517921
B2M beta-2-microglobulin 0.0514647
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0513987
SQSTM1 sequestosome 1 0.0492518
TXNIP thioredoxin interacting protein 0.0478529
ZSWIM6 zinc finger, SWIM-type containing 6 0.0467694
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0460049
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0447946
MYO5B myosin VB 0.0445068
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0443684
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0432802
FAT1 FAT atypical cadherin 1 0.0428865
CLCN3 chloride channel, voltage-sensitive 3 0.0410653
UNC13B unc-13 homolog B (C. elegans) 0.0409908
SIK3 SIK family kinase 3 0.040555
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide 0.0405059
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 0.0395536
NAB1 NGFI-A binding protein 1 (EGR1 binding protein 1) 0.0394268
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0384891
CRY1 cryptochrome circadian clock 1 0.0374535
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0364299
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0360243
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0359399
GOLGA4 golgin A4 0.0358814
FTL ferritin, light polypeptide 0.034497
CD44 CD44 molecule (Indian blood group) 0.0344056
PGK1 phosphoglycerate kinase 1 0.0342271
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0339399
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 0.0336496
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0334929
ARHGAP21 Rho GTPase activating protein 21 0.033042
WHRN whirlin 0.0327896
ERC2 ELKS/RAB6-interacting/CAST family member 2 0.0326489
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0326197
EIF1 eukaryotic translation initiation factor 1 0.0325824
DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3 0.0325329
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0320816
MT2A metallothionein 2A 0.0320717
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0320041
HNRNPK heterogeneous nuclear ribonucleoprotein K 0.0319845
GOLGB1 golgin B1 0.0318097
GLS2 glutaminase 2 (liver, mitochondrial) 0.0317906
RPS8 ribosomal protein S8 0.0317517
MACF1 microtubule-actin crosslinking factor 1 0.031629
PCBP2 poly(rC) binding protein 2 0.0315717
APLP2 amyloid beta (A4) precursor-like protein 2 0.031418
CLTC clathrin, heavy chain (Hc) 0.0312837
ANXA2 annexin A2 0.0309879
BRD2 bromodomain containing 2 0.0309774
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 0.03051
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0304206
SERBP1 SERPINE1 mRNA binding protein 1 0.0302085
MBNL1 muscleblind-like splicing regulator 1 0.0301182
PLEC plectin 0.0292434
SOX4 SRY (sex determining region Y)-box 4 0.028817
TMED2 transmembrane emp24 domain trafficking protein 2 0.0280975
LAMC2 laminin, gamma 2 0.0279041
KIAA1671 KIAA1671 0.0278545
SPDYA speedy/RINGO cell cycle regulator family member A 0.0276209
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0274904
RPL23 ribosomal protein L23 0.027214
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0271371
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0270627
RPL3 ribosomal protein L3 0.0269619
AKAP13 A kinase (PRKA) anchor protein 13 0.0269353
RPL7 ribosomal protein L7 0.0263707
GCLC glutamate-cysteine ligase, catalytic subunit 0.0262272
TGFBR3 transforming growth factor, beta receptor III 0.0261828
IQGAP1 IQ motif containing GTPase activating protein 1 0.0254032
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0252108
SGMS2 sphingomyelin synthase 2 0.0248438

decreased expression

Symbol Name Standardized Value
NPSR1 neuropeptide S receptor 1 -0.231402
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.121212
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.11536
VCL vinculin -0.111949
TNS4 tensin 4 -0.105397
NALF1 NALCN channel auxiliary factor 1 -0.10531
MUC6 mucin 6, oligomeric mucus/gel-forming -0.103942
CEMIP cell migration inducing protein, hyaluronan binding -0.0892122
MUC5AC mucin 5AC, oligomeric mucus/gel-forming -0.0781094
GPHN gephyrin -0.0709431
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0629737
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0628425
TMSB10 thymosin beta 10 -0.0627961
RNF43 ring finger protein 43 -0.0600322
PTMA prothymosin, alpha -0.0584296
ZBTB20 zinc finger and BTB domain containing 20 -0.0573987
FLNB filamin B, beta -0.0550735
BCAT1 branched chain amino-acid transaminase 1, cytosolic -0.051514
MAML2 mastermind-like 2 (Drosophila) -0.0485094
GREB1L growth regulation by estrogen in breast cancer-like -0.0467439
MED13L mediator complex subunit 13-like -0.0444439
CALB1 calbindin 1, 28kDa -0.0434923
ITGB4 integrin, beta 4 -0.0414856
PPARG peroxisome proliferator-activated receptor gamma -0.0403321
NDRG1 N-myc downstream regulated 1 -0.040324
PNISR PNN-interacting serine/arginine-rich protein -0.0393936
GCC2 GRIP and coiled-coil domain containing 2 -0.0391964
RAD51B RAD51 paralog B -0.0390962
CD46 CD46 molecule, complement regulatory protein -0.0377892
PTPRR protein tyrosine phosphatase, receptor type, R -0.03739
PDLIM5 PDZ and LIM domain 5 -0.0367406
FHL2 four and a half LIM domains 2 -0.0365019
PRSS3 protease, serine, 3 -0.0346213
NRXN3 neurexin 3 -0.0343806
FUT8 fucosyltransferase 8 (alpha (1,6) fucosyltransferase) -0.0341339
FTH1 ferritin, heavy polypeptide 1 -0.033994
LRCH1 leucine-rich repeats and calponin homology (CH) domain containing 1 -0.0338807
NFIA nuclear factor I/A -0.0336052
NCOR1 nuclear receptor corepressor 1 -0.0332341
BCKDHB branched chain keto acid dehydrogenase E1, beta polypeptide -0.0321755
TBC1D5 TBC1 domain family, member 5 -0.0316013
ABHD2 abhydrolase domain containing 2 -0.031548
FERMT1 fermitin family member 1 -0.0314198
RNF217 ring finger protein 217 -0.0311376
MYO1D myosin ID -0.0309844
PALLD palladin, cytoskeletal associated protein -0.0308609
ROCK2 Rho-associated, coiled-coil containing protein kinase 2 -0.0306639
DENND1A DENN/MADD domain containing 1A -0.0305284
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0304864
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0303571
PUM2 pumilio RNA-binding family member 2 -0.0302039
ANKRD11 ankyrin repeat domain 11 -0.0301139
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b -0.0297138
CDC42BPA CDC42 binding protein kinase alpha (DMPK-like) -0.0294886
RIN2 Ras and Rab interactor 2 -0.0293772
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 -0.0287908
KLK10 kallikrein-related peptidase 10 -0.028344
EGR1 early growth response 1 -0.028318
SETD5 SET domain containing 5 -0.0281468
ZMYM2 zinc finger, MYM-type 2 -0.0274257
ANXA3 annexin A3 -0.0273063
MECOM MDS1 and EVI1 complex locus -0.027288
RAB3GAP1 RAB3 GTPase activating protein subunit 1 (catalytic) -0.0270766
RBM39 RNA binding motif protein 39 -0.0270252
PAN3 PAN3 poly(A) specific ribonuclease subunit -0.026835
EHBP1 EH domain binding protein 1 -0.0264906
HDAC2 histone deacetylase 2 -0.0260108
S100P S100 calcium binding protein P -0.0258835
SLC35F3 solute carrier family 35, member F3 -0.0258496
POTEF POTE ankyrin domain family, member F -0.0258112
BCL2L1 BCL2-like 1 -0.0256987
WSB1 WD repeat and SOCS box containing 1 -0.0256295
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa -0.025545
PTEN phosphatase and tensin homolog -0.0254673
FOXP2 forkhead box P2 -0.0254012
OGA O-GlcNAcase -0.0253043
FOSL1 FOS-like antigen 1 -0.0253012
PICALM phosphatidylinositol binding clathrin assembly protein -0.0252583
SLC20A2 solute carrier family 20 (phosphate transporter), member 2 -0.0251048
GRIN2B glutamate receptor, ionotropic, N-methyl D-aspartate 2B -0.0250213
ACTN4 actinin, alpha 4 -0.0246444
MBD5 methyl-CpG binding domain protein 5 -0.024505
GDF15 growth differentiation factor 15 -0.0243234
FOXO1 forkhead box O1 -0.024266
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0241002
NT5C2 5'-nucleotidase, cytosolic II -0.0239719
TANC1 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 -0.0238317
ANK3 ankyrin 3, node of Ranvier (ankyrin G) -0.0237918
SNTB1 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) -0.0237571
CFTR cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7) -0.0234858
CADPS Ca++-dependent secretion activator -0.0229859
ANTXR2 anthrax toxin receptor 2 -0.0229109
NR4A1 nuclear receptor subfamily 4, group A, member 1 -0.0228832
ETNK1 ethanolamine kinase 1 -0.0228716
THSD4 thrombospondin, type I, domain containing 4 -0.0228206
RPL35A ribosomal protein L35a -0.0226674
NEK7 NIMA-related kinase 7 -0.0226051
MSI2 musashi RNA-binding protein 2 -0.022571
RPS24 ribosomal protein S24 -0.022398
FOXP1 forkhead box P1 -0.0221983