EX229_NCI-H2347 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description EX229 perturbation in NCI-H2347 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the EX229_NCI-H2347 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.314445
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.302298
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.230614
CANX calnexin 0.127589
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.126763
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.119855
PABPC1 poly(A) binding protein, cytoplasmic 1 0.114874
APLP2 amyloid beta (A4) precursor-like protein 2 0.106905
AHNAK AHNAK nucleoprotein 0.098711
DSPP dentin sialophosphoprotein 0.0905462
ENO1 enolase 1, (alpha) 0.0884232
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0833287
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0829634
SQSTM1 sequestosome 1 0.0790775
ZSWIM6 zinc finger, SWIM-type containing 6 0.0788886
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0788629
CALR calreticulin 0.0787497
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0716647
EXT1 exostosin glycosyltransferase 1 0.0685278
IFI27 interferon, alpha-inducible protein 27 0.0682526
UPP1 uridine phosphorylase 1 0.067682
EIF1 eukaryotic translation initiation factor 1 0.0674964
TPM3 tropomyosin 3 0.0646312
MYH9 myosin, heavy chain 9, non-muscle 0.0639421
TPT1 tumor protein, translationally-controlled 1 0.0632906
GRB10 growth factor receptor-bound protein 10 0.0626696
PARP14 poly (ADP-ribose) polymerase family, member 14 0.059837
GOLGA4 golgin A4 0.0593577
ASPH aspartate beta-hydroxylase 0.0586457
LDHA lactate dehydrogenase A 0.0582178
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0552981
FNDC3B fibronectin type III domain containing 3B 0.0549849
GOLGB1 golgin B1 0.0547226
RPS8 ribosomal protein S8 0.053977
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0536948
CSNK1A1 casein kinase 1, alpha 1 0.0516551
RPL23 ribosomal protein L23 0.051346
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0512558
SAMD4A sterile alpha motif domain containing 4A 0.0505751
PRRC2C proline-rich coiled-coil 2C 0.0499598
TOP1 topoisomerase (DNA) I 0.0493712
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0483916
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.0482969
HSPA8 heat shock 70kDa protein 8 0.0476411
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0472375
G0S2 G0/G1 switch 2 0.0469701
LAMC2 laminin, gamma 2 0.0467742
EEF2 eukaryotic translation elongation factor 2 0.0455831
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0449113
RPS3 ribosomal protein S3 0.0444788
PTMA prothymosin, alpha 0.0443354
ANXA2 annexin A2 0.0442567
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0441702
RPL12 ribosomal protein L12 0.0436527
FTL ferritin, light polypeptide 0.0435616
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0434117
PTK2 protein tyrosine kinase 2 0.0432433
MAP1B microtubule-associated protein 1B 0.0431671
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.043056
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.042566
PLEC plectin 0.0424097
RPS6 ribosomal protein S6 0.042111
PDIA3 protein disulfide isomerase family A, member 3 0.0421012
SET SET nuclear proto-oncogene 0.042035
NAP1L1 nucleosome assembly protein 1-like 1 0.0416262
MX1 MX dynamin-like GTPase 1 0.0412928
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0402934
ARRDC3 arrestin domain containing 3 0.0400166
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0399995
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0392166
VEGFA vascular endothelial growth factor A 0.0391154
LIMCH1 LIM and calponin homology domains 1 0.0390071
RNF213 ring finger protein 213 0.03881
EFNA5 ephrin-A5 0.0385236
ERBIN erbb2 interacting protein 0.0382796
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0382395
RPS17 ribosomal protein S17 0.0379488
KTN1 kinectin 1 (kinesin receptor) 0.0377427
IFI16 interferon, gamma-inducible protein 16 0.0376374
CD109 CD109 molecule 0.0373234
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0368751
SH3KBP1 SH3-domain kinase binding protein 1 0.0365972
RCOR1 REST corepressor 1 0.0351793
IGFBP3 insulin-like growth factor binding protein 3 0.0351419
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0351393
TFPI2 tissue factor pathway inhibitor 2 0.0350317
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0349976
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0349695
ARHGAP5 Rho GTPase activating protein 5 0.034706
SEC31A SEC31 homolog A (S. cerevisiae) 0.0339615
TRIO trio Rho guanine nucleotide exchange factor 0.0337531
PCBP2 poly(rC) binding protein 2 0.0336298
TTC3 tetratricopeptide repeat domain 3 0.0335651
RPS12 ribosomal protein S12 0.0334776
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0334174
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.033255
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 0.0331881
RAI14 retinoic acid induced 14 0.0329532
SPTBN1 spectrin, beta, non-erythrocytic 1 0.032622
CLTC clathrin, heavy chain (Hc) 0.0324609

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.105944
ACTG1 actin gamma 1 -0.0873844
POTEF POTE ankyrin domain family, member F -0.078627
TMSB10 thymosin beta 10 -0.0678399
NDRG1 N-myc downstream regulated 1 -0.0613071
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0533475
MT2A metallothionein 2A -0.0397974
LOC112694756 uncharaterized LOC112694756 -0.0362022
FN1 fibronectin 1 -0.0330666
HMGA1 high mobility group AT-hook 1 -0.0316559
NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta -0.0277133
RPL35A ribosomal protein L35a -0.0268457
FAM3C family with sequence similarity 3, member C -0.0259586
FAM162A family with sequence similarity 162, member A -0.0258349
CCNL1 cyclin L1 -0.0226443
NPC2 Niemann-Pick disease, type C2 -0.0214725
UGCG UDP-glucose ceramide glucosyltransferase -0.0209999
S100A4 S100 calcium binding protein A4 -0.0185477
WTAP Wilms tumor 1 associated protein -0.0184006
NEK7 NIMA-related kinase 7 -0.0183254
S100A6 S100 calcium binding protein A6 -0.0181526
SLC25A36 solute carrier family 25 (pyrimidine nucleotide carrier), member 36 -0.0179764
G2E3 G2/M-phase specific E3 ubiquitin protein ligase -0.0179657
MAL2 mal, T-cell differentiation protein 2 (gene/pseudogene) -0.0169743
CTSD cathepsin D -0.0166647
CLDN4 claudin 4 -0.0165964
ABI1 abl-interactor 1 -0.0163535
USP3 ubiquitin specific peptidase 3 -0.0158263
NCOA7 nuclear receptor coactivator 7 -0.0155562
NDFIP1 Nedd4 family interacting protein 1 -0.0155362
KLHL24 kelch-like family member 24 -0.0155114
RICTOR RPTOR independent companion of MTOR, complex 2 -0.0145593
NPEPPS aminopeptidase puromycin sensitive -0.0145257
DHX9 DEAH (Asp-Glu-Ala-His) box helicase 9 -0.0141239
AGFG1 ArfGAP with FG repeats 1 -0.0140959
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0140585
MSMO1 methylsterol monooxygenase 1 -0.0140028
CDCP1 CUB domain containing protein 1 -0.0138754
TXNIP thioredoxin interacting protein -0.0138698
ICAM1 intercellular adhesion molecule 1 -0.0137686
MIS18BP1 MIS18 binding protein 1 -0.0135353
MT1X metallothionein 1X -0.0133069
RHEB Ras homolog enriched in brain -0.0132182
SH3BGRL3 SH3 domain binding glutamate-rich protein like 3 -0.012972
PPDPF pancreatic progenitor cell differentiation and proliferation factor -0.0129276
CXCL3 chemokine (C-X-C motif) ligand 3 -0.0128865
TMEM263 transmembrane protein 263 -0.0127987
MEF2D myocyte enhancer factor 2D -0.0125237
S100A10 S100 calcium binding protein A10 -0.0124059
PNISR PNN-interacting serine/arginine-rich protein -0.0121994
PNRC1 proline-rich nuclear receptor coactivator 1 -0.0121801
SF1 splicing factor 1 -0.0118621
CNOT2 CCR4-NOT transcription complex, subunit 2 -0.0117509
CD59 CD59 molecule, complement regulatory protein -0.0116969
PIAS1 protein inhibitor of activated STAT, 1 -0.0115227
CAPZA1 capping protein (actin filament) muscle Z-line, alpha 1 -0.0114674
TMEM123 transmembrane protein 123 -0.0114072
KDM3A lysine (K)-specific demethylase 3A -0.0112691
AGRN agrin -0.011174
FBXO33 F-box protein 33 -0.0111362
HS3ST1 heparan sulfate (glucosamine) 3-O-sulfotransferase 1 -0.0111015
RPL28 ribosomal protein L28 -0.0110066
KHDC4 KH domain containing 4, pre-mRNA splicing factor -0.0109733
PELI1 pellino E3 ubiquitin protein ligase 1 -0.0109264
TAPBP TAP binding protein (tapasin) -0.0108711
PDPK1 3-phosphoinositide dependent protein kinase 1 -0.010783
SPINT2 serine peptidase inhibitor, Kunitz type, 2 -0.0107685
CDK17 cyclin-dependent kinase 17 -0.0106419
UBE2B ubiquitin-conjugating enzyme E2B -0.0106107
RNF38 ring finger protein 38 -0.0106051
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.0105316
TIMP1 TIMP metallopeptidase inhibitor 1 -0.0104434
RIPK2 receptor-interacting serine-threonine kinase 2 -0.010364
RRAS2 related RAS viral (r-ras) oncogene homolog 2 -0.0103114
PPP2CA protein phosphatase 2, catalytic subunit, alpha isozyme -0.0102921
LMAN1 lectin, mannose-binding, 1 -0.0102558
PRPF39 pre-mRNA processing factor 39 -0.010116
ATP5F1B ATP synthase F1 subunit beta -0.0101126
CD46 CD46 molecule, complement regulatory protein -0.00997932
FBXO32 F-box protein 32 -0.00997641
ARHGAP29 Rho GTPase activating protein 29 -0.00987578
CHMP2B charged multivesicular body protein 2B -0.00985198
PPP1R2 protein phosphatase 1, regulatory (inhibitor) subunit 2 -0.00984005
KMT2E lysine (K)-specific methyltransferase 2E -0.00976175
TFG TRK-fused gene -0.00974809
GNA13 guanine nucleotide binding protein (G protein), alpha 13 -0.00966682
HP1BP3 heterochromatin protein 1, binding protein 3 -0.00961447
MUC20 mucin 20, cell surface associated -0.00943227
MUC1 mucin 1, cell surface associated -0.00930548
PROSER2 proline and serine rich 2 -0.00927242
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.00908592
GNAS GNAS complex locus -0.00901776
SARAF store-operated calcium entry-associated regulatory factor -0.00882856
AREL1 apoptosis resistant E3 ubiquitin protein ligase 1 -0.00876008
IER3 immediate early response 3 -0.0087587
HBP1 HMG-box transcription factor 1 -0.00872212
OSBPL9 oxysterol binding protein-like 9 -0.00871927
JUP junction plakoglobin -0.00871267
BTG3 BTG family, member 3 -0.00869644
SREK1IP1 SREK1-interacting protein 1 -0.00857754