EX229_NCI-H661 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description EX229 perturbation in NCI-H661 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the EX229_NCI-H661 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
COL11A1 collagen, type XI, alpha 1 0.185114
COL3A1 collagen, type III, alpha 1 0.127843
CDH6 cadherin 6, type 2, K-cadherin (fetal kidney) 0.101273
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0952603
COL5A2 collagen, type V, alpha 2 0.0843301
CDH10 cadherin 10, type 2 (T2-cadherin) 0.0774148
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0707283
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0703942
ENO1 enolase 1, (alpha) 0.0701341
CALR calreticulin 0.0690124
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.0682196
HDAC9 histone deacetylase 9 0.0675506
ERBB4 erb-b2 receptor tyrosine kinase 4 0.0639693
SAMD4A sterile alpha motif domain containing 4A 0.05881
ZEB2 zinc finger E-box binding homeobox 2 0.0571096
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.056468
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0542782
DST dystonin 0.0538252
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.0501101
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0497287
PDIA6 protein disulfide isomerase family A, member 6 0.049396
MYH9 myosin, heavy chain 9, non-muscle 0.0483631
ANKRD33B ankyrin repeat domain 33B 0.0477117
APLP2 amyloid beta (A4) precursor-like protein 2 0.0472278
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0467833
PRRC2C proline-rich coiled-coil 2C 0.0456265
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0452925
CCT5 chaperonin containing TCP1, subunit 5 (epsilon) 0.044833
SMYD3 SET and MYND domain containing 3 0.0429761
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0428834
MACF1 microtubule-actin crosslinking factor 1 0.0428756
COL1A2 collagen, type I, alpha 2 0.0421681
NF1 neurofibromin 1 0.0414425
TMSB4X thymosin beta 4, X-linked 0.0407262
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0394989
CALU calumenin 0.0391098
ANXA1 annexin A1 0.0389051
XPO1 exportin 1 0.0387013
SUPT5H suppressor of Ty 5 homolog (S. cerevisiae) 0.0385286
GLG1 golgi glycoprotein 1 0.0382822
PTK2 protein tyrosine kinase 2 0.0381929
TRIO trio Rho guanine nucleotide exchange factor 0.0381807
ADGRV1 adhesion G protein-coupled receptor V1 0.0380695
IARS1 isoleucyl-tRNA synthetase 1 0.0377036
IQGAP1 IQ motif containing GTPase activating protein 1 0.0371419
SEC63 SEC63 homolog (S. cerevisiae) 0.0366517
DSCAM Down syndrome cell adhesion molecule 0.0360729
CAMKMT calmodulin-lysine N-methyltransferase 0.03553
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0353797
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 0.0351976
GARS1 glycyl-tRNA synthetase 1 0.0343679
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0341999
CTNNA3 catenin (cadherin-associated protein), alpha 3 0.0340361
RERE arginine-glutamic acid dipeptide (RE) repeats 0.033663
TAS2R14 taste receptor, type 2, member 14 0.0331168
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0328317
CANX calnexin 0.0327046
RALGAPA1 Ral GTPase activating protein, alpha subunit 1 (catalytic) 0.0326484
USP9X ubiquitin specific peptidase 9, X-linked 0.0326009
TSC22D2 TSC22 domain family, member 2 0.0324538
NRDC nardilysin convertase 0.0321094
CKAP5 cytoskeleton associated protein 5 0.0320775
SCAF11 SR-related CTD-associated factor 11 0.0320443
NOP58 NOP58 ribonucleoprotein 0.0320183
NAMPT nicotinamide phosphoribosyltransferase 0.0320133
OSBPL10 oxysterol binding protein-like 10 0.0318285
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0317792
PDIA4 protein disulfide isomerase family A, member 4 0.0317159
CLTC clathrin, heavy chain (Hc) 0.0312289
SF3B1 splicing factor 3b, subunit 1, 155kDa 0.0303227
BZW1 basic leucine zipper and W2 domains 1 0.0300906
TPR translocated promoter region, nuclear basket protein 0.0299924
PJA2 praja ring finger 2, E3 ubiquitin protein ligase 0.0295348
H1-0 H1.0 linker histone 0.029451
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0291777
RSL1D1 ribosomal L1 domain containing 1 0.029031
PAFAH1B1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa) 0.0286856
TARS1 threonyl-tRNA synthetase 1 0.0285081
PPP6R3 protein phosphatase 6, regulatory subunit 3 0.0284662
MDK midkine (neurite growth-promoting factor 2) 0.0283439
LDHA lactate dehydrogenase A 0.0283017
NCAM2 neural cell adhesion molecule 2 0.0280711
MEMO1 mediator of cell motility 1 0.0280332
YES1 YES proto-oncogene 1, Src family tyrosine kinase 0.0278002
CRISPLD1 cysteine-rich secretory protein LCCL domain containing 1 0.0277483
WWC2 WW and C2 domain containing 2 0.0276774
ANO6 anoctamin 6 0.0275416
NTM neurotrimin 0.0272439
SUPT16H suppressor of Ty 16 homolog (S. cerevisiae) 0.0271558
CDC73 cell division cycle 73 0.0270284
LIMS1 LIM and senescent cell antigen-like domains 1 0.0266895
VPS13B vacuolar protein sorting 13 homolog B (yeast) 0.0266658
PRPF8 pre-mRNA processing factor 8 0.0265837
PCLO piccolo presynaptic cytomatrix protein 0.0265651
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 0.0265179
TPX2 TPX2, microtubule-associated 0.0264985
MB21D2 Mab-21 domain containing 2 0.0263976
SET SET nuclear proto-oncogene 0.026302
EZR ezrin 0.0261896
GANAB glucosidase, alpha; neutral AB 0.0261722

decreased expression

Symbol Name Standardized Value
POTEF POTE ankyrin domain family, member F -0.0977754
VIM vimentin -0.0816427
PTMA prothymosin, alpha -0.0769959
TMSB10 thymosin beta 10 -0.0674049
ATP5F1B ATP synthase F1 subunit beta -0.0669351
BACH2 BTB and CNC homology 1, basic leucine zipper transcription factor 2 -0.0597707
ACTG1 actin gamma 1 -0.0551223
RPL35A ribosomal protein L35a -0.0525629
HS3ST5 heparan sulfate (glucosamine) 3-O-sulfotransferase 5 -0.0517657
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha -0.0491606
MAP4 microtubule-associated protein 4 -0.0475375
PFN1 profilin 1 -0.0464623
CENPF centromere protein F, 350/400kDa -0.0452594
RPL37 ribosomal protein L37 -0.0451397
PLPP1 phospholipid phosphatase 1 -0.0437945
RPS8 ribosomal protein S8 -0.0430559
FTL ferritin, light polypeptide -0.0430025
RPS27A ribosomal protein S27a -0.0421135
PPP1R12A protein phosphatase 1, regulatory subunit 12A -0.0416235
ITGAV integrin, alpha V -0.0415754
AKAP9 A kinase (PRKA) anchor protein 9 -0.0393397
RPS6 ribosomal protein S6 -0.0392755
GNAS GNAS complex locus -0.0384516
RPS16 ribosomal protein S16 -0.037873
RBM25 RNA binding motif protein 25 -0.0378483
FOXP2 forkhead box P2 -0.0370073
KDM5B lysine (K)-specific demethylase 5B -0.0369762
RPS12 ribosomal protein S12 -0.0360354
AFF1 AF4/FMR2 family, member 1 -0.035429
TOX thymocyte selection-associated high mobility group box -0.0352054
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0348816
RPL31 ribosomal protein L31 -0.0337012
G2E3 G2/M-phase specific E3 ubiquitin protein ligase -0.0334441
EPHA5 EPH receptor A5 -0.0333435
CCDC138 coiled-coil domain containing 138 -0.0326999
ADGRL3 adhesion G protein-coupled receptor L3 -0.0325774
RPS25 ribosomal protein S25 -0.0318574
RTN4 reticulon 4 -0.0316948
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 -0.0313754
OSBPL9 oxysterol binding protein-like 9 -0.0313169
ISG15 ISG15 ubiquitin-like modifier -0.0303668
SYT1 synaptotagmin I -0.0303208
PAWR PRKC, apoptosis, WT1, regulator -0.0302331
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.0288708
TOMM20 translocase of outer mitochondrial membrane 20 homolog (yeast) -0.028822
PHIP pleckstrin homology domain interacting protein -0.0284563
LHFPL6 LHFPL tetraspan subfamily member 6 -0.0284192
RPS11 ribosomal protein S11 -0.0284113
CCN2 cellular communication network factor 2 -0.0277085
PLCB4 phospholipase C, beta 4 -0.0271709
CAMTA1 calmodulin binding transcription activator 1 -0.0268398
FBXO11 F-box protein 11 -0.0263565
H3-3B H3.3 histone B -0.0262601
RPL19 ribosomal protein L19 -0.0261848
NIPBL Nipped-B homolog (Drosophila) -0.0261415
FAF1 Fas (TNFRSF6) associated factor 1 -0.0258287
DSTN destrin (actin depolymerizing factor) -0.0256863
BBX bobby sox homolog (Drosophila) -0.0256571
TMBIM6 transmembrane BAX inhibitor motif containing 6 -0.025483
DEK DEK proto-oncogene -0.0254621
TBC1D12 TBC1 domain family, member 12 -0.0252611
SREK1 splicing regulatory glutamine/lysine-rich protein 1 -0.0251867
HMGA1 high mobility group AT-hook 1 -0.0251227
RPLP1 ribosomal protein, large, P1 -0.0250651
RPS13 ribosomal protein S13 -0.0250207
FAM171B family with sequence similarity 171, member B -0.0249693
EGLN3 egl-9 family hypoxia-inducible factor 3 -0.024964
RPL5 ribosomal protein L5 -0.0249326
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0249263
RPL9 ribosomal protein L9 -0.0248187
RB1CC1 RB1-inducible coiled-coil 1 -0.0248008
HSPB1 heat shock 27kDa protein 1 -0.0246131
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme -0.0244274
HMGB1 high mobility group box 1 -0.0239488
UBE2B ubiquitin-conjugating enzyme E2B -0.0239453
SPAG9 sperm associated antigen 9 -0.023878
TENM3 teneurin transmembrane protein 3 -0.023789
CTNNA2 catenin (cadherin-associated protein), alpha 2 -0.0236915
EIF3K eukaryotic translation initiation factor 3, subunit K -0.0236093
RALA v-ral simian leukemia viral oncogene homolog A (ras related) -0.0235026
PALLD palladin, cytoskeletal associated protein -0.0234646
RPS20 ribosomal protein S20 -0.0233909
EAPP E2F-associated phosphoprotein -0.0233729
RICTOR RPTOR independent companion of MTOR, complex 2 -0.0232572
AKAP13 A kinase (PRKA) anchor protein 13 -0.0231524
FOXO3 forkhead box O3 -0.0230732
RPS24 ribosomal protein S24 -0.0230338
RPS29 ribosomal protein S29 -0.0226543
SOX2 SRY (sex determining region Y)-box 2 -0.0225936
APOE apolipoprotein E -0.0225825
NDUFV2 NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa -0.0223777
RPL30 ribosomal protein L30 -0.0223125
FBXL20 F-box and leucine-rich repeat protein 20 -0.022277
UBC ubiquitin C -0.0220842
ATRX alpha thalassemia/mental retardation syndrome X-linked -0.0220079
ADAM17 ADAM metallopeptidase domain 17 -0.0218561
PDGFC platelet derived growth factor C -0.0218459
REST RE1-silencing transcription factor -0.0218101
HCN1 hyperpolarization activated cyclic nucleotide gated potassium channel 1 -0.02151
SLC36A4 solute carrier family 36 (proton/amino acid symporter), member 4 -0.0214557