Elagolix sodium_COLO 205 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Elagolix sodium perturbation in COLO 205 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Elagolix sodium_COLO 205 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
DNAJC15 DnaJ (Hsp40) homolog, subfamily C, member 15 0.104399
INTS6 integrator complex subunit 6 0.0807685
CYP3A5 cytochrome P450, family 3, subfamily A, polypeptide 5 0.0622915
RNF213 ring finger protein 213 0.0547608
SMAD3 SMAD family member 3 0.0478434
HCN1 hyperpolarization activated cyclic nucleotide gated potassium channel 1 0.0385595
STS steroid sulfatase (microsomal), isozyme S 0.0355521
LRCH1 leucine-rich repeats and calponin homology (CH) domain containing 1 0.0334112
RIGI RNA sensor RIG-I 0.0301845
CHST11 carbohydrate (chondroitin 4) sulfotransferase 11 0.0297763
TNS4 tensin 4 0.0276158
MX1 MX dynamin-like GTPase 1 0.0275475
DDX60L DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like 0.0268984
CTBP2 C-terminal binding protein 2 0.0259118
PLSCR2 phospholipid scramblase 2 0.0254695
MLPH melanophilin 0.02346
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0225386
CEMIP cell migration inducing protein, hyaluronan binding 0.0215474
NABP1 nucleic acid binding protein 1 0.0211245
POU2F2 POU class 2 homeobox 2 0.0205865
PADI1 peptidyl arginine deiminase, type I 0.0200428
BCL2L1 BCL2-like 1 0.0194731
SRRM2 serine/arginine repetitive matrix 2 0.0193942
KIF16B kinesin family member 16B 0.0186479
EPHA2 EPH receptor A2 0.0185372
MPRIP myosin phosphatase Rho interacting protein 0.018379
GMDS GDP-mannose 4,6-dehydratase 0.017784
SH3PXD2A SH3 and PX domains 2A 0.0176847
SHB Src homology 2 domain containing adaptor protein B 0.0173434
FBXO39 F-box protein 39 0.0172418
ANXA2 annexin A2 0.0171552
PRSS22 protease, serine, 22 0.0167834
LRRC8A leucine rich repeat containing 8 family, member A 0.0166349
RSAD2 radical S-adenosyl methionine domain containing 2 0.0166086
NCOR2 nuclear receptor corepressor 2 0.0165418
ARHGAP26 Rho GTPase activating protein 26 0.0164601
PLEKHM1 pleckstrin homology domain containing, family M (with RUN domain) member 1 0.0160236
TRIO trio Rho guanine nucleotide exchange factor 0.0156269
ZHX2 zinc fingers and homeoboxes 2 0.0154671
FHIT fragile histidine triad 0.015024
CATSPERB catsper channel auxiliary subunit beta 0.015002
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0147383
SIPA1L2 signal-induced proliferation-associated 1 like 2 0.0147066
DSCAML1 Down syndrome cell adhesion molecule like 1 0.0146707
IGFBP3 insulin-like growth factor binding protein 3 0.0145713
ZSWIM6 zinc finger, SWIM-type containing 6 0.0141744
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0138769
EPHB3 EPH receptor B3 0.0138013
TSHZ2 teashirt zinc finger homeobox 2 0.0137164
SLC16A3 solute carrier family 16 (monocarboxylate transporter), member 3 0.0136604
GLS2 glutaminase 2 (liver, mitochondrial) 0.013176
DIP2B DIP2 disco-interacting protein 2 homolog B (Drosophila) 0.0129965
DHFR dihydrofolate reductase 0.0129731
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0128453
POF1B premature ovarian failure, 1B 0.0127976
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.012779
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0127509
ARHGAP27 Rho GTPase activating protein 27 0.0127481
TM4SF19 transmembrane 4 L six family member 19 0.0124673
SEPTIN9 septin 9 0.0124396
VEGFA vascular endothelial growth factor A 0.0123769
EEIG1 estrogen-induced osteoclastogenesis regulator 1 0.0122923
PPP1R10 protein phosphatase 1, regulatory subunit 10 0.0122324
UBAP2 ubiquitin associated protein 2 0.0121811
PLEC plectin 0.0120122
ASXL1 additional sex combs like transcriptional regulator 1 0.0119981
HOMER1 homer scaffolding protein 1 0.0118363
EFNB2 ephrin-B2 0.0114227
ANKRD18A ankyrin repeat domain 18A 0.0113564
HKDC1 hexokinase domain containing 1 0.0113499
AKAP13 A kinase (PRKA) anchor protein 13 0.011183
GON4L gon-4-like (C. elegans) 0.0110848
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) 0.0110634
EPHB2 EPH receptor B2 0.010968
MAML3 mastermind-like 3 (Drosophila) 0.0108104
MAD1L1 MAD1 mitotic arrest deficient-like 1 (yeast) 0.0107991
TOX3 TOX high mobility group box family member 3 0.0107951
IFI44 interferon-induced protein 44 0.0106838
SDCBP syndecan binding protein (syntenin) 0.0106466
RFX3 regulatory factor X, 3 (influences HLA class II expression) 0.0106379
PRKCE protein kinase C, epsilon 0.0106135
CDK5RAP3 CDK5 regulatory subunit associated protein 3 0.0105934
HNRNPA3 heterogeneous nuclear ribonucleoprotein A3 0.0105246
SKI SKI proto-oncogene 0.0102895
FXR1 fragile X mental retardation, autosomal homolog 1 0.0102452
BCR breakpoint cluster region 0.0101297
SZT2 seizure threshold 2 homolog (mouse) 0.01003
TPM3 tropomyosin 3 0.0100205
PLSCR1 phospholipid scramblase 1 0.0100109
RAPGEF2 Rap guanine nucleotide exchange factor (GEF) 2 0.00996992
DNAJB6 DnaJ (Hsp40) homolog, subfamily B, member 6 0.00996806
KYNU kynureninase 0.00995118
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.00994242
ABO ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase) 0.0098457
RCOR1 REST corepressor 1 0.0098242
TJP1 tight junction protein 1 0.0098233
PRR5L proline rich 5 like 0.00977881
GAREM1 GRB2 associated regulator of MAPK1 subtype 1 0.00975339
AHRR aryl-hydrocarbon receptor repressor 0.00966349
ZEB1 zinc finger E-box binding homeobox 1 0.00958946

decreased expression

Symbol Name Standardized Value
B2M beta-2-microglobulin -0.198701
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.192939
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.173683
TPT1 tumor protein, translationally-controlled 1 -0.143583
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.131792
ZMYND8 zinc finger, MYND-type containing 8 -0.110725
HLA-B major histocompatibility complex, class I, B -0.11017
LCN2 lipocalin 2 -0.100248
PTMA prothymosin, alpha -0.098145
TXNIP thioredoxin interacting protein -0.084377
BTBD9 BTB (POZ) domain containing 9 -0.0795612
MBNL2 muscleblind-like splicing regulator 2 -0.0771749
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.074972
IFI6 interferon, alpha-inducible protein 6 -0.0746646
CANX calnexin -0.0739386
UBC ubiquitin C -0.0723812
RHOBTB3 Rho-related BTB domain containing 3 -0.0717408
H1-0 H1.0 linker histone -0.0701474
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0689439
PKM pyruvate kinase, muscle -0.0660615
RPS6 ribosomal protein S6 -0.0633193
PTBP3 polypyrimidine tract binding protein 3 -0.0629143
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.062752
PDIA3 protein disulfide isomerase family A, member 3 -0.0625163
PGK1 phosphoglycerate kinase 1 -0.062233
AHI1 Abelson helper integration site 1 -0.0614174
RUNX1 runt-related transcription factor 1 -0.0599696
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0593309
EIF1 eukaryotic translation initiation factor 1 -0.0569547
PERP PERP, TP53 apoptosis effector -0.0569348
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0566286
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0559344
MACC1 metastasis associated in colon cancer 1 -0.0558386
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0557022
EGLN3 egl-9 family hypoxia-inducible factor 3 -0.0534158
EPCAM epithelial cell adhesion molecule -0.0530438
ENO1 enolase 1, (alpha) -0.0527087
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0497224
ZKSCAN1 zinc finger with KRAB and SCAN domains 1 -0.0489674
HLA-E major histocompatibility complex, class I, E -0.0482851
PATJ PATJ crumbs cell polarity complex component -0.047493
DSTN destrin (actin depolymerizing factor) -0.0472196
IFI27 interferon, alpha-inducible protein 27 -0.0471626
CALR calreticulin -0.0460672
UBR2 ubiquitin protein ligase E3 component n-recognin 2 -0.046039
FNDC3A fibronectin type III domain containing 3A -0.0452525
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0442605
NCKAP5 NCK-associated protein 5 -0.0440485
RRBP1 ribosome binding protein 1 -0.0438589
ZNF292 zinc finger protein 292 -0.0435889
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0435878
SPATS2L spermatogenesis associated, serine-rich 2-like -0.0434893
NDRG1 N-myc downstream regulated 1 -0.0419488
LDHA lactate dehydrogenase A -0.0417978
SPTBN1 spectrin, beta, non-erythrocytic 1 -0.0417854
ABLIM1 actin binding LIM protein 1 -0.0417464
RPLP1 ribosomal protein, large, P1 -0.041113
GOLGB1 golgin B1 -0.0407116
HLA-A major histocompatibility complex, class I, A -0.040085
ERC2 ELKS/RAB6-interacting/CAST family member 2 -0.0395976
NT5C3A 5'-nucleotidase, cytosolic IIIA -0.0391001
HLA-C major histocompatibility complex, class I, C -0.0389719
GCC2 GRIP and coiled-coil domain containing 2 -0.0388072
ARHGAP5 Rho GTPase activating protein 5 -0.0385107
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0380223
IRF1 interferon regulatory factor 1 -0.0377947
SPDYA speedy/RINGO cell cycle regulator family member A -0.0375968
LYZ lysozyme -0.0370007
PARP4 poly (ADP-ribose) polymerase family, member 4 -0.0366964
TM9SF2 transmembrane 9 superfamily member 2 -0.0366809
IFNGR1 interferon gamma receptor 1 -0.0365654
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 -0.0361375
PAN3 PAN3 poly(A) specific ribonuclease subunit -0.0357769
XAF1 XIAP associated factor 1 -0.0353393
DSCAM Down syndrome cell adhesion molecule -0.0349507
GOLGA4 golgin A4 -0.0348506
EZR ezrin -0.0348122
LOC102724023 ES1 protein homolog, mitochondrial -0.0347338
DIAPH3 diaphanous-related formin 3 -0.0346237
TMSB10 thymosin beta 10 -0.0338226
ARF1 ADP-ribosylation factor 1 -0.0337381
RPL34 ribosomal protein L34 -0.0335297
APOL1 apolipoprotein L, 1 -0.0334355
SBF2 SET binding factor 2 -0.0334109
CD46 CD46 molecule, complement regulatory protein -0.0332562
TRIM2 tripartite motif containing 2 -0.0331914
RBM39 RNA binding motif protein 39 -0.0331898
MKI67 marker of proliferation Ki-67 -0.0324917
EHF ets homologous factor -0.032382
RPL19 ribosomal protein L19 -0.0323235
DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3 -0.0322628
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0321391
MYO1E myosin IE -0.0319786
COPB1 coatomer protein complex, subunit beta 1 -0.0319295
RPL12 ribosomal protein L12 -0.0318696
TNRC6B trinucleotide repeat containing 6B -0.0318081
GNAS GNAS complex locus -0.0317771
SLC38A1 solute carrier family 38, member 1 -0.031735
ANKHD1 ankyrin repeat and KH domain containing 1 -0.0316335
STAU1 staufen double-stranded RNA binding protein 1 -0.0313444