Elagolix sodium_LoVo Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Elagolix sodium perturbation in LoVo cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Elagolix sodium_LoVo drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0605079
ACTG1 actin gamma 1 0.0601638
SRRM2 serine/arginine repetitive matrix 2 0.0480216
LOC112694756 uncharaterized LOC112694756 0.0286236
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0259887
KCNK1 potassium channel, two pore domain subfamily K, member 1 0.0256047
KTN1 kinectin 1 (kinesin receptor) 0.0250597
AKAP9 A kinase (PRKA) anchor protein 9 0.0250336
KDM7A lysine (K)-specific demethylase 7A 0.023371
GOLGA4 golgin A4 0.02155
EEF2 eukaryotic translation elongation factor 2 0.0206738
UBA6 ubiquitin-like modifier activating enzyme 6 0.0205396
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0201531
TMBIM6 transmembrane BAX inhibitor motif containing 6 0.0189856
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0185982
RACK1 receptor for activated C kinase 1 0.0181539
HLA-C major histocompatibility complex, class I, C 0.0176487
TXNRD1 thioredoxin reductase 1 0.0173142
HSPA8 heat shock 70kDa protein 8 0.0168495
CHD1 chromodomain helicase DNA binding protein 1 0.0164931
GDF15 growth differentiation factor 15 0.0161187
DDIT4 DNA-damage-inducible transcript 4 0.0161184
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.016063
FTH1 ferritin, heavy polypeptide 1 0.0155245
CYP2S1 cytochrome P450, family 2, subfamily S, polypeptide 1 0.0154615
CLINT1 clathrin interactor 1 0.0152473
SF3B1 splicing factor 3b, subunit 1, 155kDa 0.0152185
TRIM31 tripartite motif containing 31 0.015007
RNF19A ring finger protein 19A, RBR E3 ubiquitin protein ligase 0.0147585
TTC3 tetratricopeptide repeat domain 3 0.0147054
ARRDC3 arrestin domain containing 3 0.0146558
ABHD2 abhydrolase domain containing 2 0.0143148
BRD2 bromodomain containing 2 0.0140779
PRRC2C proline-rich coiled-coil 2C 0.0135947
ESYT2 extended synaptotagmin-like protein 2 0.0133747
RNF145 ring finger protein 145 0.0133227
POTEF POTE ankyrin domain family, member F 0.0131683
NDRG1 N-myc downstream regulated 1 0.0130798
ELF3 E74-like factor 3 (ets domain transcription factor, epithelial-specific ) 0.0130681
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0130598
LRRC1 leucine rich repeat containing 1 0.0130302
TMEM165 transmembrane protein 165 0.0129318
FOXO1 forkhead box O1 0.0129256
GALNT3 polypeptide N-acetylgalactosaminyltransferase 3 0.0129242
VDAC1 voltage-dependent anion channel 1 0.0128662
TMF1 TATA element modulatory factor 1 0.0127873
PIK3C2A phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha 0.0127735
FERMT1 fermitin family member 1 0.0126814
RPS3 ribosomal protein S3 0.0126424
RAB6A RAB6A, member RAS oncogene family 0.0125848
MLEC malectin 0.0124747
SLC25A6 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6 0.0124422
PTEN phosphatase and tensin homolog 0.0122725
ESRP1 epithelial splicing regulatory protein 1 0.0122262
PCM1 pericentriolar material 1 0.0120372
CXADR coxsackie virus and adenovirus receptor 0.01179
CSNK1G3 casein kinase 1, gamma 3 0.0116748
SREK1 splicing regulatory glutamine/lysine-rich protein 1 0.0116286
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 0.0115434
CBX3 chromobox homolog 3 0.0114015
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa 0.0113651
RBM26 RNA binding motif protein 26 0.0112647
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0112442
EIF1 eukaryotic translation initiation factor 1 0.0112345
MINDY2 MINDY lysine 48 deubiquitinase 2 0.0109413
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0109393
ACBD3 acyl-CoA binding domain containing 3 0.0109389
JMY junction mediating and regulatory protein, p53 cofactor 0.0108648
PNISR PNN-interacting serine/arginine-rich protein 0.010862
SLC25A5 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5 0.0107988
PCBP2 poly(rC) binding protein 2 0.0107641
CLTC clathrin, heavy chain (Hc) 0.0106533
CIB1 calcium and integrin binding 1 (calmyrin) 0.0106458
SMC4 structural maintenance of chromosomes 4 0.0106285
PDZD8 PDZ domain containing 8 0.0104056
UBE3A ubiquitin protein ligase E3A 0.0103801
KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 0.0103199
ITGB4 integrin, beta 4 0.0102531
XPO1 exportin 1 0.0102511
LRP6 low density lipoprotein receptor-related protein 6 0.0102361
EIF2S2 eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa 0.0101859
SEC23A Sec23 homolog A (S. cerevisiae) 0.0100652
SLK STE20-like kinase 0.0100591
CENPF centromere protein F, 350/400kDa 0.0100556
MKI67 marker of proliferation Ki-67 0.0100262
CCNC cyclin C 0.00999457
EEA1 early endosome antigen 1 0.00996167
RB1CC1 RB1-inducible coiled-coil 1 0.00993426
TNS4 tensin 4 0.00991809
TMED2 transmembrane emp24 domain trafficking protein 2 0.00989532
RTN4 reticulon 4 0.00989367
MINK1 misshapen-like kinase 1 0.00976369
FAT1 FAT atypical cadherin 1 0.00974095
ERBIN erbb2 interacting protein 0.00957073
NKTR natural killer cell triggering receptor 0.00949891
RFX7 regulatory factor X, 7 0.0094657
DSCAM Down syndrome cell adhesion molecule 0.00945543
DEK DEK proto-oncogene 0.00941346
CD47 CD47 molecule 0.00939103
TMEM87A transmembrane protein 87A 0.00935728

decreased expression

Symbol Name Standardized Value
LMO7 LIM domain 7 -0.112329
TPT1 tumor protein, translationally-controlled 1 -0.101052
MYO1E myosin IE -0.093957
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0918359
PDE4D phosphodiesterase 4D, cAMP-specific -0.0916444
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0868813
GMDS GDP-mannose 4,6-dehydratase -0.0771016
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0676725
INTS6 integrator complex subunit 6 -0.0671263
SLCO1B3-SLCO1B7 SLCO1B3-SLCO1B7 readthrough -0.0652515
THSD4 thrombospondin, type I, domain containing 4 -0.0636224
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0609138
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0603325
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0587992
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0548799
PTPRB protein tyrosine phosphatase, receptor type, B -0.0506303
PTPRK protein tyrosine phosphatase, receptor type, K -0.0503404
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0497441
KRT8 keratin 8, type II -0.04974
FRMD5 FERM domain containing 5 -0.0495226
EXT1 exostosin glycosyltransferase 1 -0.0492719
CCSER1 coiled-coil serine-rich protein 1 -0.049207
VCL vinculin -0.0481769
CATSPERB catsper channel auxiliary subunit beta -0.0477166
CUX1 cut-like homeobox 1 -0.0475992
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 -0.0467635
ANXA2 annexin A2 -0.0461862
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa -0.0445065
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0441095
SP100 SP100 nuclear antigen -0.0429368
MSI2 musashi RNA-binding protein 2 -0.0419095
SPINK13 serine peptidase inhibitor, Kazal type 13 (putative) -0.0409925
SERINC5 serine incorporator 5 -0.0402354
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0401138
LPP LIM domain containing preferred translocation partner in lipoma -0.0400395
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0395902
RPS24 ribosomal protein S24 -0.0391492
RPS12 ribosomal protein S12 -0.0384675
TMSB10 thymosin beta 10 -0.0382488
ACTN4 actinin, alpha 4 -0.0378159
FNDC3B fibronectin type III domain containing 3B -0.0371422
FBXO11 F-box protein 11 -0.0370787
PTMA prothymosin, alpha -0.0362842
RPL4 ribosomal protein L4 -0.0362556
MYO5B myosin VB -0.0361344
CTBP2 C-terminal binding protein 2 -0.036052
PDLIM5 PDZ and LIM domain 5 -0.035857
RPL34 ribosomal protein L34 -0.035399
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme -0.0340931
IFRD1 interferon-related developmental regulator 1 -0.033869
TAS2R14 taste receptor, type 2, member 14 -0.0337796
RPS6 ribosomal protein S6 -0.0336115
DENND1A DENN/MADD domain containing 1A -0.0335904
PKM pyruvate kinase, muscle -0.0332491
FUS FUS RNA binding protein -0.0332491
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 -0.0332303
LRRC23 leucine rich repeat containing 23 -0.0331533
VTI1A vesicle transport through interaction with t-SNAREs 1A -0.0322831
MCU mitochondrial calcium uniporter -0.0315957
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.031268
RABGAP1L RAB GTPase activating protein 1-like -0.0304917
RAD51B RAD51 paralog B -0.0303615
RIMKLB ribosomal modification protein rimK-like family member B -0.030116
MYH14 myosin, heavy chain 14, non-muscle -0.0298567
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 -0.0294362
EXOC4 exocyst complex component 4 -0.0294025
OXSR1 oxidative stress responsive 1 -0.0294023
NAB1 NGFI-A binding protein 1 (EGR1 binding protein 1) -0.0282722
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 -0.0282689
OGDH oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide) -0.028161
AOPEP aminopeptidase O (putative) -0.0280432
UBAP2 ubiquitin associated protein 2 -0.0279257
RPS23 ribosomal protein S23 -0.0278574
PALLD palladin, cytoskeletal associated protein -0.0275679
CANX calnexin -0.0275449
NABP1 nucleic acid binding protein 1 -0.0274564
UBE2E2 ubiquitin-conjugating enzyme E2E 2 -0.0274521
ZCCHC7 zinc finger, CCHC domain containing 7 -0.0274442
ITPRID2 ITPR interacting domain containing 2 -0.0273709
FHIT fragile histidine triad -0.0270767
RPL26 ribosomal protein L26 -0.0269462
PSD3 pleckstrin and Sec7 domain containing 3 -0.026854
LRPPRC leucine-rich pentatricopeptide repeat containing -0.026838
RPS25 ribosomal protein S25 -0.0268283
SLC9A1 solute carrier family 9, subfamily A (NHE1, cation proton antiporter 1), member 1 -0.0266661
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0265821
ERC1 ELKS/RAB6-interacting/CAST family member 1 -0.0265229
IGF1R insulin-like growth factor 1 receptor -0.0264742
RPLP2 ribosomal protein, large, P2 -0.0263362
RPS17 ribosomal protein S17 -0.0263039
AHNAK AHNAK nucleoprotein -0.0261811
RPL23 ribosomal protein L23 -0.0259473
CLIC5 chloride intracellular channel 5 -0.0259134
PATJ PATJ crumbs cell polarity complex component -0.025433
MAGI3 membrane associated guanylate kinase, WW and PDZ domain containing 3 -0.0249328
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0248824
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0245876
RPLP1 ribosomal protein, large, P1 -0.0243222
SPON1 spondin 1, extracellular matrix protein -0.0241715
BRIP1 BRCA1 interacting protein C-terminal helicase 1 -0.0240874