Elagolix sodium_RKO Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Elagolix sodium perturbation in RKO cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Elagolix sodium_RKO drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FRMD6 FERM domain containing 6 0.146893
FLNB filamin B, beta 0.146061
ACTG1 actin gamma 1 0.144656
ARHGAP22 Rho GTPase activating protein 22 0.126131
EEF2 eukaryotic translation elongation factor 2 0.111512
ZNF438 zinc finger protein 438 0.088971
LOC112694756 uncharaterized LOC112694756 0.0795779
LAMB3 laminin, beta 3 0.0789007
SRRM2 serine/arginine repetitive matrix 2 0.0787066
FRMD4A FERM domain containing 4A 0.0744379
AGO2 argonaute RISC catalytic component 2 0.0733523
PHC2 polyhomeotic homolog 2 (Drosophila) 0.0603777
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 0.0582883
HSPA8 heat shock 70kDa protein 8 0.0561809
FLNA filamin A, alpha 0.0550101
NAV2 neuron navigator 2 0.0537529
C2CD2 C2 calcium-dependent domain containing 2 0.0516554
MCL1 myeloid cell leukemia 1 0.0515775
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0505986
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0476017
COL27A1 collagen, type XXVII, alpha 1 0.0474056
PBX3 pre-B-cell leukemia homeobox 3 0.0467927
HMGA2 high mobility group AT-hook 2 0.0462451
PRRC2A proline-rich coiled-coil 2A 0.0455916
TPM4 tropomyosin 4 0.0455125
ASAP2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 0.0424036
GFPT2 glutamine-fructose-6-phosphate transaminase 2 0.0412126
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0399047
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 0.0395455
AKAP12 A kinase (PRKA) anchor protein 12 0.0388196
KPNB1 karyopherin (importin) beta 1 0.0371801
RAD51B RAD51 paralog B 0.0358122
RGS4 regulator of G-protein signaling 4 0.0351294
MTDH metadherin 0.0339509
ZBTB38 zinc finger and BTB domain containing 38 0.0336699
GALNT18 polypeptide N-acetylgalactosaminyltransferase 18 0.0332795
SET SET nuclear proto-oncogene 0.0327823
DST dystonin 0.0324206
SSR3 signal sequence receptor, gamma (translocon-associated protein gamma) 0.0322877
CEP250 centrosomal protein 250kDa 0.0319493
RRM2 ribonucleotide reductase M2 0.0316816
ANXA2 annexin A2 0.0309299
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 0.0307315
SIPA1L1 signal-induced proliferation-associated 1 like 1 0.0300979
RNF213 ring finger protein 213 0.0297802
SMTN smoothelin 0.0293525
MYH9 myosin, heavy chain 9, non-muscle 0.0293404
PARP14 poly (ADP-ribose) polymerase family, member 14 0.0293302
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0292051
HELZ2 helicase with zinc finger 2, transcriptional coactivator 0.0291871
EFNB2 ephrin-B2 0.0289289
DEK DEK proto-oncogene 0.0289089
EIF4H eukaryotic translation initiation factor 4H 0.0288101
SQSTM1 sequestosome 1 0.0283167
IFI16 interferon, gamma-inducible protein 16 0.0280746
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0277505
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 0.0274458
TM4SF1 transmembrane 4 L six family member 1 0.0270788
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0259658
DOCK1 dedicator of cytokinesis 1 0.0254544
CTIF CBP80/20-dependent translation initiation factor 0.0246566
ENO1 enolase 1, (alpha) 0.0246332
LARGE1 LARGE xylosyl- and glucuronyltransferase 1 0.0243899
TRIM44 tripartite motif containing 44 0.0242749
SURF4 surfeit 4 0.0241723
SLC38A1 solute carrier family 38, member 1 0.0235655
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0234025
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0230698
NUDC nudC nuclear distribution protein 0.0222932
CASP4 caspase 4, apoptosis-related cysteine peptidase 0.0222505
JUN jun proto-oncogene 0.0220802
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0220399
PABPC4 poly(A) binding protein, cytoplasmic 4 (inducible form) 0.0218083
RACK1 receptor for activated C kinase 1 0.0217928
SF3B1 splicing factor 3b, subunit 1, 155kDa 0.0217346
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0213108
UBE2G2 ubiquitin-conjugating enzyme E2G 2 0.0210279
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 0.021021
STC1 stanniocalcin 1 0.020968
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0208169
RPS4X ribosomal protein S4, X-linked 0.020739
PRKCE protein kinase C, epsilon 0.0207205
FKBP15 FK506 binding protein 15, 133kDa 0.0206959
SLC25A6 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6 0.0206664
MAPKAP1 mitogen-activated protein kinase associated protein 1 0.0205425
ARHGEF28 Rho guanine nucleotide exchange factor (GEF) 28 0.0204638
ADTRP androgen-dependent TFPI-regulating protein 0.0204053
FEZ2 fasciculation and elongation protein zeta 2 (zygin II) 0.0200558
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0199525
PIEZO1 piezo-type mechanosensitive ion channel component 1 0.0198432
ARHGAP39 Rho GTPase activating protein 39 0.0196377
CMIP c-Maf inducing protein 0.0196338
HDLBP high density lipoprotein binding protein 0.0195761
VAV2 vav 2 guanine nucleotide exchange factor 0.0195743
MAPK13 mitogen-activated protein kinase 13 0.0195102
BAZ1A bromodomain adjacent to zinc finger domain, 1A 0.0194941
SLFN5 schlafen family member 5 0.0192332
SAMD12 sterile alpha motif domain containing 12 0.0190764
TRAPPC9 trafficking protein particle complex 9 0.0189865
GALNT6 polypeptide N-acetylgalactosaminyltransferase 6 0.0189098

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.147185
MCTP1 multiple C2 domains, transmembrane 1 -0.0695639
DLC1 DLC1 Rho GTPase activating protein -0.0659404
ZNF292 zinc finger protein 292 -0.0590847
ZFAND3 zinc finger, AN1-type domain 3 -0.05356
PTK2 protein tyrosine kinase 2 -0.0526618
SBF2 SET binding factor 2 -0.0509834
RBM39 RNA binding motif protein 39 -0.0492174
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.0487711
PUM2 pumilio RNA-binding family member 2 -0.0486885
TMSB10 thymosin beta 10 -0.0479659
RAD21 RAD21 homolog (S. pombe) -0.0474686
JMJD1C jumonji domain containing 1C -0.0458795
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0450924
ATP13A3 ATPase type 13A3 -0.0428909
TRIO trio Rho guanine nucleotide exchange factor -0.0425896
DHX15 DEAH (Asp-Glu-Ala-His) box helicase 15 -0.0420479
DIAPH3 diaphanous-related formin 3 -0.0408885
MAP4K5 mitogen-activated protein kinase kinase kinase kinase 5 -0.0404758
RPL26 ribosomal protein L26 -0.0397923
TTR transthyretin -0.0396994
CCNL1 cyclin L1 -0.0395031
TM9SF3 transmembrane 9 superfamily member 3 -0.0394201
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0389725
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0388136
SETD5 SET domain containing 5 -0.0385987
PGK1 phosphoglycerate kinase 1 -0.0377944
MT2A metallothionein 2A -0.0376685
NUP58 nucleoporin 58 -0.0374067
RPL9 ribosomal protein L9 -0.0367123
VPS13B vacuolar protein sorting 13 homolog B (yeast) -0.0366844
RPS21 ribosomal protein S21 -0.0360872
PKM pyruvate kinase, muscle -0.0359334
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0359287
KMT2E lysine (K)-specific methyltransferase 2E -0.0356591
BIRC6 baculoviral IAP repeat containing 6 -0.035633
KMT2C lysine (K)-specific methyltransferase 2C -0.0354413
POTEF POTE ankyrin domain family, member F -0.0346918
FOXJ3 forkhead box J3 -0.0344351
USP34 ubiquitin specific peptidase 34 -0.0339276
COG5 component of oligomeric golgi complex 5 -0.0334936
PTMA prothymosin, alpha -0.0333836
RPS15 ribosomal protein S15 -0.0330428
NKTR natural killer cell triggering receptor -0.0322488
ANKRD12 ankyrin repeat domain 12 -0.0320368
ZMYM2 zinc finger, MYM-type 2 -0.0308898
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0307215
USP3 ubiquitin specific peptidase 3 -0.0306953
RPL32 ribosomal protein L32 -0.0303632
TRAM1 translocation associated membrane protein 1 -0.0300997
ARID2 AT rich interactive domain 2 (ARID, RFX-like) -0.0299087
NAMPT nicotinamide phosphoribosyltransferase -0.0298698
CNOT4 CCR4-NOT transcription complex, subunit 4 -0.0297251
KDM6A lysine (K)-specific demethylase 6A -0.0296528
RPS2 ribosomal protein S2 -0.0290968
BRD4 bromodomain containing 4 -0.0290606
CDC73 cell division cycle 73 -0.0288811
RLF rearranged L-myc fusion -0.0287862
RPS24 ribosomal protein S24 -0.0287382
RBM25 RNA binding motif protein 25 -0.0286397
TFG TRK-fused gene -0.0285109
LRPPRC leucine-rich pentatricopeptide repeat containing -0.0284915
NF1 neurofibromin 1 -0.0284265
SRPK2 SRSF protein kinase 2 -0.0281325
CNOT2 CCR4-NOT transcription complex, subunit 2 -0.0280331
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0279603
RPLP2 ribosomal protein, large, P2 -0.0278883
ZCCHC7 zinc finger, CCHC domain containing 7 -0.027551
RPL28 ribosomal protein L28 -0.0275023
SPAG9 sperm associated antigen 9 -0.0274465
GARS1 glycyl-tRNA synthetase 1 -0.0273722
DENND4A DENN/MADD domain containing 4A -0.0271783
RPL19 ribosomal protein L19 -0.0269885
NIPBL Nipped-B homolog (Drosophila) -0.0267861
CLTC clathrin, heavy chain (Hc) -0.026622
ANKRD17 ankyrin repeat domain 17 -0.0265859
ECT2 epithelial cell transforming 2 -0.0263871
MIS18BP1 MIS18 binding protein 1 -0.0262704
TXNRD1 thioredoxin reductase 1 -0.0262487
RHEB Ras homolog enriched in brain -0.0261483
LCORL ligand dependent nuclear receptor corepressor-like -0.0261427
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0260222
FNDC3B fibronectin type III domain containing 3B -0.0259969
ADAM17 ADAM metallopeptidase domain 17 -0.0259179
RPL5 ribosomal protein L5 -0.0258279
EVI5 ecotropic viral integration site 5 -0.0257367
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0257367
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0253851
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0253386
ADAM9 ADAM metallopeptidase domain 9 -0.0249405
MTAP methylthioadenosine phosphorylase -0.0248672
NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta -0.0246636
CANX calnexin -0.0246629
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0242821
PTBP3 polypyrimidine tract binding protein 3 -0.0242395
HELZ helicase with zinc finger -0.0241639
RPL21 ribosomal protein L21 -0.0240742
MNAT1 MNAT CDK-activating kinase assembly factor 1 -0.0240687
UBA6 ubiquitin-like modifier activating enzyme 6 -0.0240185
LDHA lactate dehydrogenase A -0.0239247