Elagolix sodium_SK-MEL-2 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Elagolix sodium perturbation in SK-MEL-2 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Elagolix sodium_SK-MEL-2 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FN1 fibronectin 1 0.109579
AKAP12 A kinase (PRKA) anchor protein 12 0.0900235
IGFBP3 insulin-like growth factor binding protein 3 0.0782831
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0732699
PLEC plectin 0.0584451
EEF2 eukaryotic translation elongation factor 2 0.0494393
MSN moesin 0.0478399
FLNA filamin A, alpha 0.0468024
FNDC3B fibronectin type III domain containing 3B 0.040573
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0399414
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0382695
LOC112694756 uncharaterized LOC112694756 0.0381038
TPM3 tropomyosin 3 0.0380582
CLIP4 CAP-GLY domain containing linker protein family, member 4 0.0377611
SRRM2 serine/arginine repetitive matrix 2 0.0368785
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0360939
KTN1 kinectin 1 (kinesin receptor) 0.0353829
MYH9 myosin, heavy chain 9, non-muscle 0.0321675
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0318077
RTN4 reticulon 4 0.0309261
SERPINA3 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 0.0305342
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0304366
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.030003
RPL3 ribosomal protein L3 0.0295513
CHD1 chromodomain helicase DNA binding protein 1 0.0286533
VEGFA vascular endothelial growth factor A 0.0282187
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0281243
CD109 CD109 molecule 0.027576
LINGO2 leucine rich repeat and Ig domain containing 2 0.0273654
SPAG9 sperm associated antigen 9 0.0270957
HSPA8 heat shock 70kDa protein 8 0.0269107
AKT3 v-akt murine thymoma viral oncogene homolog 3 0.0262916
WDR45B WD repeat domain 45B 0.0262677
EIF4H eukaryotic translation initiation factor 4H 0.0262288
HDAC9 histone deacetylase 9 0.025001
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0242132
MCL1 myeloid cell leukemia 1 0.0241701
GOLGB1 golgin B1 0.0235688
PRRC2A proline-rich coiled-coil 2A 0.0230341
SOX10 SRY (sex determining region Y)-box 10 0.022983
RNF145 ring finger protein 145 0.0223278
ARRDC3 arrestin domain containing 3 0.0222544
PRKAR1A protein kinase, cAMP-dependent, regulatory, type I, alpha 0.0222426
ZMIZ1 zinc finger, MIZ-type containing 1 0.020544
SREBF2 sterol regulatory element binding transcription factor 2 0.0204104
KMT2E lysine (K)-specific methyltransferase 2E 0.0202904
NOTCH2 notch 2 0.020246
CABIN1 calcineurin binding protein 1 0.0200927
ADAM17 ADAM metallopeptidase domain 17 0.0197871
POTEF POTE ankyrin domain family, member F 0.019665
TIMP2 TIMP metallopeptidase inhibitor 2 0.019658
IGFN1 immunoglobulin-like and fibronectin type III domain containing 1 0.0196293
DIAPH1 diaphanous-related formin 1 0.0194551
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0194508
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0192529
NDRG1 N-myc downstream regulated 1 0.0190443
EP300 E1A binding protein p300 0.0189124
AFDN afadin, adherens junction formation factor 0.0187577
PDIA3 protein disulfide isomerase family A, member 3 0.018715
HELZ helicase with zinc finger 0.0186793
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0184672
LGALS3BP lectin, galactoside-binding, soluble, 3 binding protein 0.01836
UBA6 ubiquitin-like modifier activating enzyme 6 0.0183338
PCBP2 poly(rC) binding protein 2 0.0182689
JMJD1C jumonji domain containing 1C 0.017983
CSDE1 cold shock domain containing E1, RNA-binding 0.0177796
CLINT1 clathrin interactor 1 0.0177465
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.017486
HPCAL1 hippocalcin-like 1 0.0174568
SET SET nuclear proto-oncogene 0.0173871
ATXN2 ataxin 2 0.0173563
FMNL2 formin-like 2 0.01734
BHLHE40 basic helix-loop-helix family, member e40 0.0173393
CCNL1 cyclin L1 0.0170454
SMAD3 SMAD family member 3 0.0169736
COPA coatomer protein complex, subunit alpha 0.0168865
MED13 mediator complex subunit 13 0.0165726
ITCH itchy E3 ubiquitin protein ligase 0.0164869
NFE2L1 nuclear factor, erythroid 2-like 1 0.0164844
CTSB cathepsin B 0.0164583
CLIC4 chloride intracellular channel 4 0.0164257
ITGB5 integrin, beta 5 0.0164222
CTBP2 C-terminal binding protein 2 0.0163289
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0163235
DNAJB6 DnaJ (Hsp40) homolog, subfamily B, member 6 0.0163049
CENPF centromere protein F, 350/400kDa 0.0161554
TFG TRK-fused gene 0.0159994
PJA2 praja ring finger 2, E3 ubiquitin protein ligase 0.0159268
ARHGAP21 Rho GTPase activating protein 21 0.0159218
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.0157864
FAM13A family with sequence similarity 13, member A 0.0157098
TSC22D2 TSC22 domain family, member 2 0.0156795
DSTN destrin (actin depolymerizing factor) 0.0156266
TPM4 tropomyosin 4 0.0154289
DDX41 DEAD (Asp-Glu-Ala-Asp) box polypeptide 41 0.0154194
OSBPL10 oxysterol binding protein-like 10 0.0154167
OPTN optineurin 0.0153774
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0153079
CDC73 cell division cycle 73 0.0152173
CEP250 centrosomal protein 250kDa 0.0152011

decreased expression

Symbol Name Standardized Value
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.198199
NLGN1 neuroligin 1 -0.174974
MT2A metallothionein 2A -0.151473
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.149799
FMN1 formin 1 -0.138909
LSAMP limbic system-associated membrane protein -0.130397
NRG3 neuregulin 3 -0.110575
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.10935
TMSB10 thymosin beta 10 -0.0974066
VIM vimentin -0.0961801
PTMA prothymosin, alpha -0.0681946
RPLP1 ribosomal protein, large, P1 -0.0547669
FRMD4A FERM domain containing 4A -0.0534202
RPL23 ribosomal protein L23 -0.0520348
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0502871
PGK1 phosphoglycerate kinase 1 -0.0485403
TPT1 tumor protein, translationally-controlled 1 -0.048059
RPL35A ribosomal protein L35a -0.0447441
RPLP2 ribosomal protein, large, P2 -0.0436389
RPL12 ribosomal protein L12 -0.0420762
RPS24 ribosomal protein S24 -0.0420593
RPS21 ribosomal protein S21 -0.0420551
RPL32 ribosomal protein L32 -0.0405242
FHIT fragile histidine triad -0.0401287
ZBTB20 zinc finger and BTB domain containing 20 -0.0395957
SMYD3 SET and MYND domain containing 3 -0.0393334
FTL ferritin, light polypeptide -0.0384236
RPS6 ribosomal protein S6 -0.0371967
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0369991
RPL34 ribosomal protein L34 -0.0360791
MT1X metallothionein 1X -0.0359467
ST13 suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) -0.035307
RPL38 ribosomal protein L38 -0.0349097
EIF1 eukaryotic translation initiation factor 1 -0.0348469
RPS23 ribosomal protein S23 -0.034121
TNNC1 troponin C type 1 (slow) -0.0332774
PRELID2 PRELI domain containing 2 -0.0325608
RPS13 ribosomal protein S13 -0.031895
ANKRD1 ankyrin repeat domain 1 (cardiac muscle) -0.0316356
SLC39A11 solute carrier family 39, member 11 -0.0316018
RPS16 ribosomal protein S16 -0.0309064
NAP1L1 nucleosome assembly protein 1-like 1 -0.0303614
RPL37A ribosomal protein L37a -0.0295068
LRMDA leucine rich melanocyte differentiation associated -0.0288926
FUS FUS RNA binding protein -0.0287881
IGF1R insulin-like growth factor 1 receptor -0.0284628
RPL31 ribosomal protein L31 -0.0283496
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa -0.0280751
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0277698
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0273721
ATRX alpha thalassemia/mental retardation syndrome X-linked -0.0273561
RAD51B RAD51 paralog B -0.027246
ICAM1 intercellular adhesion molecule 1 -0.0272175
RPS29 ribosomal protein S29 -0.0271313
GPHN gephyrin -0.0269344
RPL36A ribosomal protein L36a -0.0269116
RPS19 ribosomal protein S19 -0.0268709
MAGI3 membrane associated guanylate kinase, WW and PDZ domain containing 3 -0.0264545
EXOC4 exocyst complex component 4 -0.0258173
SQSTM1 sequestosome 1 -0.0250099
RPS12 ribosomal protein S12 -0.0249006
RPL9 ribosomal protein L9 -0.0247325
S100A9 S100 calcium binding protein A9 -0.0243507
DLG1 discs, large homolog 1 (Drosophila) -0.0241588
CHD6 chromodomain helicase DNA binding protein 6 -0.0241194
BCAS3 breast carcinoma amplified sequence 3 -0.0240966
PDE10A phosphodiesterase 10A -0.0240175
CDH13 cadherin 13 -0.0239457
RPS27A ribosomal protein S27a -0.0231908
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 -0.0225513
HLA-B major histocompatibility complex, class I, B -0.0223876
RPS14 ribosomal protein S14 -0.0222618
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0221864
TAS2R14 taste receptor, type 2, member 14 -0.022185
MYCBP2 MYC binding protein 2, E3 ubiquitin protein ligase -0.0221688
RPLP0 ribosomal protein, large, P0 -0.0219488
RPL11 ribosomal protein L11 -0.0217946
SBF2 SET binding factor 2 -0.0217327
PTPRM protein tyrosine phosphatase, receptor type, M -0.0215128
RPL26 ribosomal protein L26 -0.0213172
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 -0.0209032
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0208273
RPL19 ribosomal protein L19 -0.020819
RPS8 ribosomal protein S8 -0.0205251
CCND1 cyclin D1 -0.0205057
RPL27A ribosomal protein L27a -0.0200743
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.0200486
GSTO1 glutathione S-transferase omega 1 -0.0200068
SLC38A1 solute carrier family 38, member 1 -0.0198491
BRIP1 BRCA1 interacting protein C-terminal helicase 1 -0.0197642
RPL5 ribosomal protein L5 -0.0196561
CA8 carbonic anhydrase VIII -0.0195016
IFI6 interferon, alpha-inducible protein 6 -0.0194908
FAF1 Fas (TNFRSF6) associated factor 1 -0.0192706
RPL28 ribosomal protein L28 -0.0191316
WDPCP WD repeat containing planar cell polarity effector -0.0190314
PDE4D phosphodiesterase 4D, cAMP-specific -0.0189759
CTNNA2 catenin (cadherin-associated protein), alpha 2 -0.018969
NHSL1 NHS-like 1 -0.018913
RPL36 ribosomal protein L36 -0.018885