Elagolix sodium_SW 1271 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Elagolix sodium perturbation in SW 1271 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Elagolix sodium_SW 1271 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
INTS6 integrator complex subunit 6 0.0673945
ZSWIM6 zinc finger, SWIM-type containing 6 0.0600652
HMGA2 high mobility group AT-hook 2 0.0562273
SLC38A2 solute carrier family 38, member 2 0.0556934
FNDC3B fibronectin type III domain containing 3B 0.0541949
DST dystonin 0.0529588
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.0487515
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.0480015
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.042571
ACTG1 actin gamma 1 0.0411191
JAK1 Janus kinase 1 0.0405368
PRR16 proline rich 16 0.040469
SLCO4A1 solute carrier organic anion transporter family, member 4A1 0.0396215
RUNX1 runt-related transcription factor 1 0.0393348
POTEF POTE ankyrin domain family, member F 0.0378178
UTRN utrophin 0.036704
MPRIP myosin phosphatase Rho interacting protein 0.0352779
CEMIP2 cell migration inducing hyaluronidase 2 0.0336797
RNF213 ring finger protein 213 0.0333516
ITGB4 integrin, beta 4 0.0326575
EXT1 exostosin glycosyltransferase 1 0.0312268
LOC112694756 uncharaterized LOC112694756 0.030631
KLHL29 kelch-like family member 29 0.0305726
PRKCA protein kinase C, alpha 0.0302135
TLE4 transducin-like enhancer of split 4 0.0300611
BICD1 bicaudal D homolog 1 (Drosophila) 0.0299657
ACTN1 actinin, alpha 1 0.029601
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.0296007
SQSTM1 sequestosome 1 0.029114
NCOR2 nuclear receptor corepressor 2 0.0285751
SMAD3 SMAD family member 3 0.0282066
SRRM2 serine/arginine repetitive matrix 2 0.0282022
DOCK9 dedicator of cytokinesis 9 0.0279724
AKAP12 A kinase (PRKA) anchor protein 12 0.0271757
FLNA filamin A, alpha 0.0268877
EGFR epidermal growth factor receptor 0.0267155
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0264977
FARS2 phenylalanyl-tRNA synthetase 2, mitochondrial 0.0264378
HDAC9 histone deacetylase 9 0.026378
NAV2 neuron navigator 2 0.0257895
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.02521
RNF130 ring finger protein 130 0.0247692
ALS2 amyotrophic lateral sclerosis 2 (juvenile) 0.0247412
ANKRD11 ankyrin repeat domain 11 0.0245195
SKI SKI proto-oncogene 0.0245103
SKIL SKI-like proto-oncogene 0.0244192
LPP LIM domain containing preferred translocation partner in lipoma 0.0241132
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.0240859
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 0.0240779
WWOX WW domain containing oxidoreductase 0.0239149
SHPRH SNF2 histone linker PHD RING helicase, E3 ubiquitin protein ligase 0.0234654
SAMD4A sterile alpha motif domain containing 4A 0.0232505
ANGPTL4 angiopoietin-like 4 0.0231511
SASH1 SAM and SH3 domain containing 1 0.0231139
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0226539
RNF217 ring finger protein 217 0.0225132
RHOBTB3 Rho-related BTB domain containing 3 0.0225064
HPCAL1 hippocalcin-like 1 0.0222923
TNRC6A trinucleotide repeat containing 6A 0.0222561
LAMA5 laminin, alpha 5 0.0221852
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0219617
LOC102724023 ES1 protein homolog, mitochondrial 0.021952
TRAM2 translocation associated membrane protein 2 0.021837
NALF1 NALCN channel auxiliary factor 1 0.0217287
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0214721
CCDC88A coiled-coil domain containing 88A 0.0214108
MED13L mediator complex subunit 13-like 0.0213476
CPEB4 cytoplasmic polyadenylation element binding protein 4 0.0209839
PAG1 phosphoprotein membrane anchor with glycosphingolipid microdomains 1 0.0208724
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0207611
HSPA8 heat shock 70kDa protein 8 0.0206424
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 0.0200868
UBE2H ubiquitin-conjugating enzyme E2H 0.0199843
EZR ezrin 0.0198826
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0198183
JUN jun proto-oncogene 0.0197238
PLEC plectin 0.0196386
IRF1 interferon regulatory factor 1 0.0194082
C2CD3 C2 calcium-dependent domain containing 3 0.019404
AREG amphiregulin 0.0193596
TIMP2 TIMP metallopeptidase inhibitor 2 0.0193119
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 0.0190211
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0189731
ATG10 autophagy related 10 0.0183611
VEGFA vascular endothelial growth factor A 0.0183255
ARID1A AT rich interactive domain 1A (SWI-like) 0.0182806
CALM1 calmodulin 1 (phosphorylase kinase, delta) 0.018273
WDR27 WD repeat domain 27 0.0182395
SDCCAG8 serologically defined colon cancer antigen 8 0.0182309
DOCK4 dedicator of cytokinesis 4 0.0182103
TPI1 triosephosphate isomerase 1 0.0181852
RNASE12 ribonuclease, RNase A family, 12 (non-active) 0.0181061
PCED1B PC-esterase domain containing 1B 0.0180971
EXOC4 exocyst complex component 4 0.0178983
ENO2 enolase 2 (gamma, neuronal) 0.017877
MYOF myoferlin 0.0177776
TRIP11 thyroid hormone receptor interactor 11 0.0177452
TAGLN2 transgelin 2 0.0177132
NR4A3 nuclear receptor subfamily 4, group A, member 3 0.0176352
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0175729

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.351532
RBM39 RNA binding motif protein 39 -0.125089
VIM vimentin -0.0962299
PTMA prothymosin, alpha -0.0768811
DSCAM Down syndrome cell adhesion molecule -0.073706
TMSB10 thymosin beta 10 -0.0731955
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0727534
LDHA lactate dehydrogenase A -0.066425
SMYD3 SET and MYND domain containing 3 -0.0612568
GOLGA4 golgin A4 -0.0596372
ANKRD28 ankyrin repeat domain 28 -0.0591002
DEK DEK proto-oncogene -0.0564472
SETD5 SET domain containing 5 -0.0555828
SOD2 superoxide dismutase 2, mitochondrial -0.0548305
CANX calnexin -0.0540941
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0531999
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0521445
TXNRD1 thioredoxin reductase 1 -0.0519112
BIRC2 baculoviral IAP repeat containing 2 -0.0515925
WAC WW domain containing adaptor with coiled-coil -0.0502216
ERC2 ELKS/RAB6-interacting/CAST family member 2 -0.0492911
ECT2 epithelial cell transforming 2 -0.0474217
TBC1D5 TBC1 domain family, member 5 -0.0459209
TPT1 tumor protein, translationally-controlled 1 -0.0454078
ELL2 elongation factor, RNA polymerase II, 2 -0.0428098
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0424932
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0418877
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0412969
TMEM123 transmembrane protein 123 -0.0408707
SMC4 structural maintenance of chromosomes 4 -0.0406267
DNER delta/notch-like EGF repeat containing -0.0404723
ZNF292 zinc finger protein 292 -0.0402025
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0401887
LRRFIP2 leucine rich repeat (in FLII) interacting protein 2 -0.0401357
WSB1 WD repeat and SOCS box containing 1 -0.0398213
NCAPD2 non-SMC condensin I complex, subunit D2 -0.0397361
BIRC6 baculoviral IAP repeat containing 6 -0.0392919
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.0392827
NAMPT nicotinamide phosphoribosyltransferase -0.0388597
RDX radixin -0.0388406
PPFIA1 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 -0.0386586
COPB1 coatomer protein complex, subunit beta 1 -0.0384491
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0384352
RPL4 ribosomal protein L4 -0.0382637
RAB1A RAB1A, member RAS oncogene family -0.0380655
ZFAND3 zinc finger, AN1-type domain 3 -0.0378297
PLEKHB2 pleckstrin homology domain containing, family B (evectins) member 2 -0.0377163
TPM4 tropomyosin 4 -0.0372934
OSMR oncostatin M receptor -0.0371559
PHF20 PHD finger protein 20 -0.0371328
NIPBL Nipped-B homolog (Drosophila) -0.0368249
FER fer (fps/fes related) tyrosine kinase -0.0365805
RPL35A ribosomal protein L35a -0.0365598
CUL3 cullin 3 -0.0364053
SREK1 splicing regulatory glutamine/lysine-rich protein 1 -0.0362046
AP2B1 adaptor-related protein complex 2, beta 1 subunit -0.0361071
NUP58 nucleoporin 58 -0.0359829
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.035743
MATR3 matrin 3 -0.0357173
NKTR natural killer cell triggering receptor -0.035448
HILPDA hypoxia inducible lipid droplet-associated -0.0350041
VPS13A vacuolar protein sorting 13 homolog A (S. cerevisiae) -0.0348462
RPL23 ribosomal protein L23 -0.0347265
JMJD1C jumonji domain containing 1C -0.03442
PPP2CA protein phosphatase 2, catalytic subunit, alpha isozyme -0.0340028
TENT2 terminal nucleotidyltransferase 2 -0.0339868
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0339056
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 -0.0335589
IARS1 isoleucyl-tRNA synthetase 1 -0.0335363
PAN3 PAN3 poly(A) specific ribonuclease subunit -0.0334932
RPL12 ribosomal protein L12 -0.0333852
ANLN anillin, actin binding protein -0.0332944
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0331547
BDP1 B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB -0.0331041
UQCC1 ubiquinol-cytochrome c reductase complex assembly factor 1 -0.0326534
PARD3 par-3 family cell polarity regulator -0.0326377
NCEH1 neutral cholesterol ester hydrolase 1 -0.0323199
PAPOLA poly(A) polymerase alpha -0.0321055
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.031507
IER3 immediate early response 3 -0.0315041
KIF5B kinesin family member 5B -0.0313483
CEP95 centrosomal protein 95kDa -0.0312912
FAF2 Fas associated factor family member 2 -0.0311626
TCERG1 transcription elongation regulator 1 -0.0309008
FUS FUS RNA binding protein -0.0307453
AK1 adenylate kinase 1 -0.0304751
LUC7L3 LUC7-like 3 (S. cerevisiae) -0.0304737
IFIH1 interferon induced with helicase C domain 1 -0.0302874
CLTC clathrin, heavy chain (Hc) -0.0302788
PGK1 phosphoglycerate kinase 1 -0.029912
CBL Cbl proto-oncogene, E3 ubiquitin protein ligase -0.0298295
SPAG9 sperm associated antigen 9 -0.0298081
CENPF centromere protein F, 350/400kDa -0.0297944
TRIO trio Rho guanine nucleotide exchange factor -0.02974
KIAA1328 KIAA1328 -0.0297314
CEP295 centrosomal protein 295kDa -0.0293385
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0293279
RPL30 ribosomal protein L30 -0.0292903
AKAP10 A kinase (PRKA) anchor protein 10 -0.0289405
SDC4 syndecan 4 -0.0289145