Elimusertib hydrochloride_SK-MEL-2 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Elimusertib hydrochloride perturbation in SK-MEL-2 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Elimusertib hydrochloride_SK-MEL-2 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
VIM vimentin 0.227162
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0953701
FLNA filamin A, alpha 0.0760807
CANX calnexin 0.0729279
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0653029
ST13 suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) 0.0633817
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0630787
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.056611
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0536642
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0532369
ANKRD1 ankyrin repeat domain 1 (cardiac muscle) 0.0483202
NFE2L1 nuclear factor, erythroid 2-like 1 0.0479305
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0460283
PARP14 poly (ADP-ribose) polymerase family, member 14 0.0450156
KDM3A lysine (K)-specific demethylase 3A 0.044664
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0442786
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0427527
CENPF centromere protein F, 350/400kDa 0.0425137
ACTN4 actinin, alpha 4 0.042096
GOLGB1 golgin B1 0.0413306
RPS4X ribosomal protein S4, X-linked 0.0382719
RRBP1 ribosome binding protein 1 0.0365492
ATF4 activating transcription factor 4 0.0349802
LMNA lamin A/C 0.0344394
SERINC1 serine incorporator 1 0.0343507
CEP250 centrosomal protein 250kDa 0.0339553
DTX3L deltex 3 like, E3 ubiquitin ligase 0.0335899
CHD4 chromodomain helicase DNA binding protein 4 0.0330831
SP100 SP100 nuclear antigen 0.0326795
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0313081
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0311386
MYH9 myosin, heavy chain 9, non-muscle 0.0309363
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.030119
SH3KBP1 SH3-domain kinase binding protein 1 0.0284991
RNF213 ring finger protein 213 0.028043
AHNAK AHNAK nucleoprotein 0.0277107
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 0.0273441
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0270023
TAOK1 TAO kinase 1 0.0268102
SORT1 sortilin 1 0.0258255
KLF6 Kruppel-like factor 6 0.0257878
BCKDHB branched chain keto acid dehydrogenase E1, beta polypeptide 0.0256269
AKAP13 A kinase (PRKA) anchor protein 13 0.0255252
OGA O-GlcNAcase 0.0254015
GNAI2 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2 0.0251188
EIF1 eukaryotic translation initiation factor 1 0.0249754
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 0.0247113
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0246205
ARPC1B actin related protein 2/3 complex, subunit 1B, 41kDa 0.0245337
TM4SF1 transmembrane 4 L six family member 1 0.024484
RSL1D1 ribosomal L1 domain containing 1 0.0244353
SYNE2 spectrin repeat containing, nuclear envelope 2 0.02396
ANXA2 annexin A2 0.0234518
IFI16 interferon, gamma-inducible protein 16 0.0234256
IQGAP1 IQ motif containing GTPase activating protein 1 0.0233357
ZNF608 zinc finger protein 608 0.023106
OS9 osteosarcoma amplified 9, endoplasmic reticulum lectin 0.022874
FAM219A family with sequence similarity 219, member A 0.0226582
IFIH1 interferon induced with helicase C domain 1 0.0224826
MACF1 microtubule-actin crosslinking factor 1 0.0224127
RPL14 ribosomal protein L14 0.0222347
TPM3 tropomyosin 3 0.0221539
APOLD1 apolipoprotein L domain containing 1 0.0220776
CTTN cortactin 0.0219718
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 0.0219627
RAD21 RAD21 homolog (S. pombe) 0.0218701
TENM1 teneurin transmembrane protein 1 0.0218621
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.021859
KTN1 kinectin 1 (kinesin receptor) 0.0217016
ADAR adenosine deaminase, RNA-specific 0.0216452
CALR calreticulin 0.0215457
HSPA8 heat shock 70kDa protein 8 0.0215091
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0214937
SFTPA2 surfactant protein A2 0.0213942
YME1L1 YME1-like 1 ATPase 0.0212961
PIK3R3 phosphoinositide-3-kinase, regulatory subunit 3 (gamma) 0.0210909
SOD2 superoxide dismutase 2, mitochondrial 0.0210665
RLIM ring finger protein, LIM domain interacting 0.0204843
UBC ubiquitin C 0.0204476
RPL19 ribosomal protein L19 0.020356
SAMD9 sterile alpha motif domain containing 9 0.0202847
MAFF v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog F 0.0202778
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0201329
AHNAK2 AHNAK nucleoprotein 2 0.0200924
MYO9A myosin IXA 0.0198124
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0197787
ANK2 ankyrin 2, neuronal 0.019644
CLIP1 CAP-GLY domain containing linker protein 1 0.019379
CABIN1 calcineurin binding protein 1 0.0193391
CORO1C coronin, actin binding protein, 1C 0.0192822
ZZZ3 zinc finger, ZZ-type containing 3 0.019034
RASAL2 RAS protein activator like 2 0.0187266
PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 0.0186785
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta 0.0186587
CREBRF CREB3 regulatory factor 0.0184855
BOD1L1 biorientation of chromosomes in cell division 1-like 1 0.018399
STAU1 staufen double-stranded RNA binding protein 1 0.0183283
EMP1 epithelial membrane protein 1 0.0182911
SMG7 SMG7 nonsense mediated mRNA decay factor 0.0182814
ATP2C1 ATPase, Ca++ transporting, type 2C, member 1 0.0182445

decreased expression

Symbol Name Standardized Value
NRG3 neuregulin 3 -0.251008
LSAMP limbic system-associated membrane protein -0.234004
FN1 fibronectin 1 -0.218508
NLGN1 neuroligin 1 -0.175023
FRMD4A FERM domain containing 4A -0.152426
FMN1 formin 1 -0.107336
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.101425
CHST11 carbohydrate (chondroitin 4) sulfotransferase 11 -0.0971783
FNDC3B fibronectin type III domain containing 3B -0.08334
SERPINA3 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 -0.0757937
MSI2 musashi RNA-binding protein 2 -0.0637969
CADM1 cell adhesion molecule 1 -0.0562023
IL1RAP interleukin 1 receptor accessory protein -0.055252
FTL ferritin, light polypeptide -0.0546212
FHIT fragile histidine triad -0.0536771
VDAC1 voltage-dependent anion channel 1 -0.0516767
CXCL8 chemokine (C-X-C motif) ligand 8 -0.051092
TNNC1 troponin C type 1 (slow) -0.0487387
SLC39A11 solute carrier family 39, member 11 -0.0481424
WWTR1 WW domain containing transcription regulator 1 -0.0466802
CNIH3 cornichon family AMPA receptor auxiliary protein 3 -0.0450558
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0440758
POTEF POTE ankyrin domain family, member F -0.0436962
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) -0.0425351
ARMC9 armadillo repeat containing 9 -0.0400675
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0394676
WDR45B WD repeat domain 45B -0.0382372
UBE2E2 ubiquitin-conjugating enzyme E2E 2 -0.0363324
ENO2 enolase 2 (gamma, neuronal) -0.0362348
KMT2E lysine (K)-specific methyltransferase 2E -0.0354875
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 -0.0349439
SQSTM1 sequestosome 1 -0.0344287
LOC112694756 uncharaterized LOC112694756 -0.0341412
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.034022
CNKSR3 CNKSR family member 3 -0.033466
APOD apolipoprotein D -0.0321578
MYCBP2 MYC binding protein 2, E3 ubiquitin protein ligase -0.0320348
GULP1 GULP, engulfment adaptor PTB domain containing 1 -0.0311989
IER3 immediate early response 3 -0.0310256
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 -0.0307576
ZNF292 zinc finger protein 292 -0.0304561
MAML2 mastermind-like 2 (Drosophila) -0.0302704
CALD1 caldesmon 1 -0.0301515
MMP12 matrix metallopeptidase 12 -0.0298131
ARHGAP5 Rho GTPase activating protein 5 -0.0297831
RPS12 ribosomal protein S12 -0.0296791
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0294128
RPL37A ribosomal protein L37a -0.0287671
PRAME preferentially expressed antigen in melanoma -0.0286288
EXT1 exostosin glycosyltransferase 1 -0.0283733
RERE arginine-glutamic acid dipeptide (RE) repeats -0.0280458
HMGA1 high mobility group AT-hook 1 -0.0279672
DOCK7 dedicator of cytokinesis 7 -0.027771
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0275774
RGS5 regulator of G-protein signaling 5 -0.027502
PRKRIP1 PRKR interacting protein 1 (IL11 inducible) -0.0274083
INPP5F inositol polyphosphate-5-phosphatase F -0.0271549
ZMYND8 zinc finger, MYND-type containing 8 -0.0270212
CFAP20DC CFAP20 domain containing -0.0269089
CTSD cathepsin D -0.0268435
THOC2 THO complex 2 -0.0266951
HLA-B major histocompatibility complex, class I, B -0.0257157
HIBADH 3-hydroxyisobutyrate dehydrogenase -0.0255773
FARP2 FERM, RhoGEF and pleckstrin domain protein 2 -0.0247718
RPL35A ribosomal protein L35a -0.024348
RNF19A ring finger protein 19A, RBR E3 ubiquitin protein ligase -0.0235126
RAD51B RAD51 paralog B -0.0230318
NF1 neurofibromin 1 -0.0230151
SRPK2 SRSF protein kinase 2 -0.0229988
WSB1 WD repeat and SOCS box containing 1 -0.0228426
CDH13 cadherin 13 -0.0227889
ANKRD28 ankyrin repeat domain 28 -0.0227406
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0224685
DLGAP1 discs, large (Drosophila) homolog-associated protein 1 -0.0224516
RPS14 ribosomal protein S14 -0.0224185
CCNL1 cyclin L1 -0.0221962
IGF1R insulin-like growth factor 1 receptor -0.0221128
ENO1 enolase 1, (alpha) -0.0220109
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0219764
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0219234
LITAF lipopolysaccharide-induced TNF factor -0.0218758
TMSB10 thymosin beta 10 -0.0218635
RPS29 ribosomal protein S29 -0.0215293
LEF1 lymphoid enhancer-binding factor 1 -0.0214977
LINC02798 long intergenic non-protein coding RNA 2798 -0.0214597
IGF2 insulin-like growth factor 2 -0.021364
RPL9 ribosomal protein L9 -0.021108
BABAM2 BRISC and BRCA1 A complex member 2 -0.0208685
AKT3 v-akt murine thymoma viral oncogene homolog 3 -0.0207056
SREBF2 sterol regulatory element binding transcription factor 2 -0.0204435
RPL31 ribosomal protein L31 -0.0202146
IGFBP7 insulin-like growth factor binding protein 7 -0.0202096
B2M beta-2-microglobulin -0.0201609
SEC24A SEC24 family member A -0.0201333
VMP1 vacuole membrane protein 1 -0.0200503
ARHGEF11 Rho guanine nucleotide exchange factor (GEF) 11 -0.0191153
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa -0.0190968
FSTL5 follistatin-like 5 -0.0190362
MAML3 mastermind-like 3 (Drosophila) -0.0190055
FOXJ3 forkhead box J3 -0.0186002