Encorafenib_A-427 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Encorafenib perturbation in A-427 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Encorafenib_A-427 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A 0.253059
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.192019
NLGN1 neuroligin 1 0.127499
PDE4D phosphodiesterase 4D, cAMP-specific 0.117412
VIM vimentin 0.094833
TENM3 teneurin transmembrane protein 3 0.0894689
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0772529
ERBB4 erb-b2 receptor tyrosine kinase 4 0.0715406
NEBL nebulette 0.0594185
MMP12 matrix metallopeptidase 12 0.0575401
HMGA2 high mobility group AT-hook 2 0.0566704
DST dystonin 0.0559302
PDGFC platelet derived growth factor C 0.0553786
RAB7A RAB7A, member RAS oncogene family 0.0496419
JMJD1C jumonji domain containing 1C 0.0485021
ANKS1B ankyrin repeat and sterile alpha motif domain containing 1B 0.0464855
ERC1 ELKS/RAB6-interacting/CAST family member 1 0.04382
EEF2 eukaryotic translation elongation factor 2 0.0430778
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) 0.0430711
LPP LIM domain containing preferred translocation partner in lipoma 0.0418631
HDAC9 histone deacetylase 9 0.0412977
SLC38A2 solute carrier family 38, member 2 0.0404993
DPYD dihydropyrimidine dehydrogenase 0.039651
NRXN3 neurexin 3 0.0394847
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0374865
VMP1 vacuole membrane protein 1 0.0373019
YAP1 Yes-associated protein 1 0.0372265
AHR aryl hydrocarbon receptor 0.0367486
RIMS2 regulating synaptic membrane exocytosis 2 0.035307
CCSER1 coiled-coil serine-rich protein 1 0.0346231
ADIPOR2 adiponectin receptor 2 0.0339422
EHBP1 EH domain binding protein 1 0.0334677
ANXA1 annexin A1 0.0329562
ANK2 ankyrin 2, neuronal 0.0328685
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0322753
AFF4 AF4/FMR2 family, member 4 0.0321823
CEP112 centrosomal protein 112kDa 0.0317318
RABGAP1L RAB GTPase activating protein 1-like 0.0311119
VTI1A vesicle transport through interaction with t-SNAREs 1A 0.0292195
CALR calreticulin 0.0277412
ZSWIM6 zinc finger, SWIM-type containing 6 0.0274641
ITGBL1 integrin, beta-like 1 (with EGF-like repeat domains) 0.0274131
ARID1B AT rich interactive domain 1B (SWI1-like) 0.0273616
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0273531
LRRTM4 leucine rich repeat transmembrane neuronal 4 0.0268562
OLR1 oxidized low density lipoprotein (lectin-like) receptor 1 0.0261009
RPS12 ribosomal protein S12 0.0248685
EPHA5 EPH receptor A5 0.0248096
RPS2 ribosomal protein S2 0.0247168
WNK1 WNK lysine deficient protein kinase 1 0.0245123
TMEM41B transmembrane protein 41B 0.0242009
L3MBTL4 l(3)mbt-like 4 (Drosophila) 0.0242006
FHIT fragile histidine triad 0.0240228
EGR1 early growth response 1 0.023829
INTS6 integrator complex subunit 6 0.023813
RNF213 ring finger protein 213 0.0236629
MAP1B microtubule-associated protein 1B 0.0236545
ANKRD17 ankyrin repeat domain 17 0.0232455
XPOT exportin, tRNA 0.0228721
ACTG1 actin gamma 1 0.0228015
ZFAND3 zinc finger, AN1-type domain 3 0.0226113
PCDH7 protocadherin 7 0.0225345
NEGR1 neuronal growth regulator 1 0.0224161
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0223558
PRR16 proline rich 16 0.022251
TXNRD1 thioredoxin reductase 1 0.0221128
MSRB3 methionine sulfoxide reductase B3 0.0219903
FNIP1 folliculin interacting protein 1 0.0219338
ANKRD12 ankyrin repeat domain 12 0.0215357
PCDH9 protocadherin 9 0.0215008
EXOC4 exocyst complex component 4 0.0213901
CMIP c-Maf inducing protein 0.0212566
DTNA dystrobrevin, alpha 0.021017
LRBA LPS-responsive vesicle trafficking, beach and anchor containing 0.0208392
MYPN myopalladin 0.020821
RPL37A ribosomal protein L37a 0.0206318
BCHE butyrylcholinesterase 0.0203644
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0202648
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 0.0200898
WWOX WW domain containing oxidoreductase 0.0198561
SYT1 synaptotagmin I 0.0198117
RTN4 reticulon 4 0.0197474
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0196175
R3HDM2 R3H domain containing 2 0.0194879
FNDC3B fibronectin type III domain containing 3B 0.0193786
PEG10 paternally expressed 10 0.0193376
NPC1 Niemann-Pick disease, type C1 0.0192698
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0191123
CDH12 cadherin 12, type 2 (N-cadherin 2) 0.0190387
NFIB nuclear factor I/B 0.0190093
DLC1 DLC1 Rho GTPase activating protein 0.0184974
CRISPLD1 cysteine-rich secretory protein LCCL domain containing 1 0.0181192
CAMK2D calcium/calmodulin-dependent protein kinase II delta 0.0177467
TPM3 tropomyosin 3 0.0176777
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 0.0173796
DSCAM Down syndrome cell adhesion molecule 0.0173753
GJA1 gap junction protein, alpha 1, 43kDa 0.0172055
CUX1 cut-like homeobox 1 0.0171715
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0171588
ERBIN erbb2 interacting protein 0.0171503

decreased expression

Symbol Name Standardized Value
AREG amphiregulin -0.0501189
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0421703
PTMA prothymosin, alpha -0.0405622
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0310275
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.0301796
H1-0 H1.0 linker histone -0.0296906
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0273041
SMC4 structural maintenance of chromosomes 4 -0.0270865
TMSB10 thymosin beta 10 -0.0267255
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0260624
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0252703
ECT2 epithelial cell transforming 2 -0.024561
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0230052
BIRC3 baculoviral IAP repeat containing 3 -0.0228075
MYL12B myosin, light chain 12B, regulatory -0.0226035
ATP5F1B ATP synthase F1 subunit beta -0.0219748
RPS24 ribosomal protein S24 -0.0215881
RPL8 ribosomal protein L8 -0.020739
NDUFV2 NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa -0.0204548
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0203263
SF3B2 splicing factor 3b, subunit 2, 145kDa -0.0202746
KDM3A lysine (K)-specific demethylase 3A -0.0200133
RAD21 RAD21 homolog (S. pombe) -0.0196737
MARCHF6 membrane associated ring-CH-type finger 6 -0.0193562
NCOR1 nuclear receptor corepressor 1 -0.0191892
YBX3 Y box binding protein 3 -0.018007
CEP192 centrosomal protein 192kDa -0.018
NCAPD2 non-SMC condensin I complex, subunit D2 -0.017814
BIRC6 baculoviral IAP repeat containing 6 -0.0177393
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha -0.0177191
YBX1 Y box binding protein 1 -0.0170317
RPL38 ribosomal protein L38 -0.0169005
RPS21 ribosomal protein S21 -0.0167499
RPLP1 ribosomal protein, large, P1 -0.0162965
CNOT2 CCR4-NOT transcription complex, subunit 2 -0.016286
CENPF centromere protein F, 350/400kDa -0.0162289
EDN1 endothelin 1 -0.0161616
LOC112694756 uncharaterized LOC112694756 -0.0160561
MATR3 matrin 3 -0.0155499
BTG3 BTG family, member 3 -0.0154731
PJA2 praja ring finger 2, E3 ubiquitin protein ligase -0.0152385
HMGB2 high mobility group box 2 -0.0152244
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0148388
MIS18BP1 MIS18 binding protein 1 -0.0143263
TRMT112 tRNA methyltransferase 11-2 homolog (S. cerevisiae) -0.0140045
XPO1 exportin 1 -0.0139004
RPS6 ribosomal protein S6 -0.0138468
WDR45B WD repeat domain 45B -0.0138041
CKAP5 cytoskeleton associated protein 5 -0.0137177
DEK DEK proto-oncogene -0.0135903
EIF4A2 eukaryotic translation initiation factor 4A2 -0.0133289
BIRC2 baculoviral IAP repeat containing 2 -0.0133133
GNL3 guanine nucleotide binding protein-like 3 (nucleolar) -0.0131647
PCNP PEST proteolytic signal containing nuclear protein -0.0130484
PPP1CB protein phosphatase 1, catalytic subunit, beta isozyme -0.0129992
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric -0.0129769
DHX36 DEAH (Asp-Glu-Ala-His) box polypeptide 36 -0.0129502
RPS16 ribosomal protein S16 -0.0128904
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0128564
CENPE centromere protein E, 312kDa -0.0126543
NOLC1 nucleolar and coiled-body phosphoprotein 1 -0.0123433
RPS15 ribosomal protein S15 -0.0122715
RPL32 ribosomal protein L32 -0.012184
EIF4A1 eukaryotic translation initiation factor 4A1 -0.0121497
TPX2 TPX2, microtubule-associated -0.0121274
PRKDC protein kinase, DNA-activated, catalytic polypeptide -0.0120972
RLF rearranged L-myc fusion -0.0119898
CPOX coproporphyrinogen oxidase -0.0118381
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0117988
R3HDM1 R3H domain containing 1 -0.0117489
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0117443
PNISR PNN-interacting serine/arginine-rich protein -0.011677
TM4SF1 transmembrane 4 L six family member 1 -0.011638
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0115503
OGA O-GlcNAcase -0.0113534
RSL1D1 ribosomal L1 domain containing 1 -0.0113532
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0113291
TRA2A transformer 2 alpha homolog (Drosophila) -0.0111874
CDK19 cyclin-dependent kinase 19 -0.0111629
RPL12 ribosomal protein L12 -0.0111383
RPL34 ribosomal protein L34 -0.0110645
AP3S1 adaptor-related protein complex 3, sigma 1 subunit -0.0110199
TMEM131 transmembrane protein 131 -0.0109865
DKK1 dickkopf WNT signaling pathway inhibitor 1 -0.0109382
THOC2 THO complex 2 -0.0109022
THOC1 THO complex 1 -0.0108699
NDFIP1 Nedd4 family interacting protein 1 -0.0108129
CALM3 calmodulin 3 (phosphorylase kinase, delta) -0.01078
VAPA VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa -0.0106973
NPR2 natriuretic peptide receptor 2 -0.0106595
PPP2R5E protein phosphatase 2, regulatory subunit B', epsilon isoform -0.010585
SRP72 signal recognition particle 72kDa -0.0105763
PRR11 proline rich 11 -0.010561
RPLP2 ribosomal protein, large, P2 -0.0105525
CUBN cubilin (intrinsic factor-cobalamin receptor) -0.0104257
NAP1L4 nucleosome assembly protein 1-like 4 -0.0103747
MLLT10 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 -0.0103712
SLC38A1 solute carrier family 38, member 1 -0.0103609
NDC80 NDC80 kinetochore complex component -0.0103433
PBK PDZ binding kinase -0.0103171