Encorafenib_NCI-H1573 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Encorafenib perturbation in NCI-H1573 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Encorafenib_NCI-H1573 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.243595
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.126425
CXCL8 chemokine (C-X-C motif) ligand 8 0.125225
EGFR epidermal growth factor receptor 0.119528
ANKRD12 ankyrin repeat domain 12 0.0910269
NDRG1 N-myc downstream regulated 1 0.0846599
STC1 stanniocalcin 1 0.0767301
GPC5 glypican 5 0.0734059
RPS3 ribosomal protein S3 0.0732592
FTH1 ferritin, heavy polypeptide 1 0.0726524
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0712936
EGR1 early growth response 1 0.0703578
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.058135
SLTM SAFB-like, transcription modulator 0.0580947
RNF213 ring finger protein 213 0.057446
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0551582
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0533267
MT2A metallothionein 2A 0.0525093
CEACAM5 carcinoembryonic antigen-related cell adhesion molecule 5 0.0511096
JMJD1C jumonji domain containing 1C 0.0465995
EEF2 eukaryotic translation elongation factor 2 0.0463183
LAMC2 laminin, gamma 2 0.043308
LDHA lactate dehydrogenase A 0.0431458
RPL37A ribosomal protein L37a 0.0427598
RPS12 ribosomal protein S12 0.0425703
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0423542
ELL2 elongation factor, RNA polymerase II, 2 0.042324
B2M beta-2-microglobulin 0.04188
RPS8 ribosomal protein S8 0.0397929
FAM107B family with sequence similarity 107, member B 0.0373657
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0370912
RACK1 receptor for activated C kinase 1 0.0368975
LAMA4 laminin, alpha 4 0.0354024
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0349271
PKM pyruvate kinase, muscle 0.0344303
LOC112694756 uncharaterized LOC112694756 0.0336046
SLC38A2 solute carrier family 38, member 2 0.033341
RPS2 ribosomal protein S2 0.0332787
HDAC9 histone deacetylase 9 0.0332371
TMTC2 transmembrane and tetratricopeptide repeat containing 2 0.0332081
PARP14 poly (ADP-ribose) polymerase family, member 14 0.0327221
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.0323879
RPL35A ribosomal protein L35a 0.0321353
RPLP1 ribosomal protein, large, P1 0.0313682
DOCK5 dedicator of cytokinesis 5 0.0312192
MCL1 myeloid cell leukemia 1 0.0311184
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0310974
S100P S100 calcium binding protein P 0.0306888
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 0.0306658
AREG amphiregulin 0.0306512
CEMIP cell migration inducing protein, hyaluronan binding 0.0306395
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 0.0303433
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0294366
NSUN6 NOP2/Sun domain family, member 6 0.0291844
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0290308
NR4A2 nuclear receptor subfamily 4, group A, member 2 0.0289398
RPS27 ribosomal protein S27 0.0288659
RAD51B RAD51 paralog B 0.0282205
IRS2 insulin receptor substrate 2 0.0281978
RPS17 ribosomal protein S17 0.0280532
RALGAPA1 Ral GTPase activating protein, alpha subunit 1 (catalytic) 0.0280378
EIF1 eukaryotic translation initiation factor 1 0.0280196
BIRC3 baculoviral IAP repeat containing 3 0.0279706
IFI6 interferon, alpha-inducible protein 6 0.0276007
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha 0.0274191
CAV2 caveolin 2 0.0273279
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0269862
FTL ferritin, light polypeptide 0.0263538
BACE2 beta-site APP-cleaving enzyme 2 0.0260376
RPL37 ribosomal protein L37 0.0259823
ENO1 enolase 1, (alpha) 0.0257357
HOMER1 homer scaffolding protein 1 0.0255854
MYO6 myosin VI 0.0253744
EXT1 exostosin glycosyltransferase 1 0.0253466
MKNK2 MAP kinase interacting serine/threonine kinase 2 0.0250997
SP100 SP100 nuclear antigen 0.0249907
RPL11 ribosomal protein L11 0.0248807
RPL7 ribosomal protein L7 0.0248272
YBX3 Y box binding protein 3 0.0248192
SRRM2 serine/arginine repetitive matrix 2 0.0245251
GRK3 G protein-coupled receptor kinase 3 0.0243191
CST3 cystatin C 0.024088
CALM1 calmodulin 1 (phosphorylase kinase, delta) 0.0236301
YES1 YES proto-oncogene 1, Src family tyrosine kinase 0.0234206
RPS25 ribosomal protein S25 0.0233593
AGO2 argonaute RISC catalytic component 2 0.0232015
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0230642
RPL30 ribosomal protein L30 0.0227558
EYA2 EYA transcriptional coactivator and phosphatase 2 0.022645
ARHGAP26 Rho GTPase activating protein 26 0.0224998
EIF4A2 eukaryotic translation initiation factor 4A2 0.0223375
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.0223077
ZBTB20 zinc finger and BTB domain containing 20 0.0220894
LAMB3 laminin, beta 3 0.021957
LOC102724023 ES1 protein homolog, mitochondrial 0.0219366
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide 0.0217654
RPS14 ribosomal protein S14 0.0217122
ERLEC1 endoplasmic reticulum lectin 1 0.0216218
WASF2 WAS protein family, member 2 0.0215871
DISC1 disrupted in schizophrenia 1 0.0213563

decreased expression

Symbol Name Standardized Value
PTPRM protein tyrosine phosphatase, receptor type, M -0.117932
ASPH aspartate beta-hydroxylase -0.111578
H1-0 H1.0 linker histone -0.0683583
THSD4 thrombospondin, type I, domain containing 4 -0.0577032
AHNAK AHNAK nucleoprotein -0.0550645
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0528599
SHANK2 SH3 and multiple ankyrin repeat domains 2 -0.0469623
PDLIM5 PDZ and LIM domain 5 -0.0371359
PDE4D phosphodiesterase 4D, cAMP-specific -0.0345661
FNDC3B fibronectin type III domain containing 3B -0.0340423
VCL vinculin -0.0324933
GSK3B glycogen synthase kinase 3 beta -0.0319817
PTPRJ protein tyrosine phosphatase, receptor type, J -0.030402
BRWD1 bromodomain and WD repeat domain containing 1 -0.0294287
ZMYM2 zinc finger, MYM-type 2 -0.0281201
ZMYND8 zinc finger, MYND-type containing 8 -0.0272792
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0268869
TBC1D22A TBC1 domain family, member 22A -0.0264661
ZC3H11A zinc finger CCCH-type containing 11A -0.0251241
PDE8A phosphodiesterase 8A -0.0250751
PATJ PATJ crumbs cell polarity complex component -0.0240531
FAM13A family with sequence similarity 13, member A -0.023382
RNF145 ring finger protein 145 -0.023279
BRWD3 bromodomain and WD repeat domain containing 3 -0.0231749
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0222743
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0222689
MAML3 mastermind-like 3 (Drosophila) -0.0222215
CAV1 caveolin 1, caveolae protein, 22kDa -0.0220095
RBM39 RNA binding motif protein 39 -0.0213935
TMEM165 transmembrane protein 165 -0.0212562
CUX1 cut-like homeobox 1 -0.0212481
AKR1C1 aldo-keto reductase family 1, member C1 -0.0211194
RICTOR RPTOR independent companion of MTOR, complex 2 -0.0207694
PARD3 par-3 family cell polarity regulator -0.0204693
OGA O-GlcNAcase -0.0202031
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0200706
SBF2 SET binding factor 2 -0.0199797
SLMAP sarcolemma associated protein -0.0199013
ZFAND6 zinc finger, AN1-type domain 6 -0.0198264
SCEL sciellin -0.0192681
UVRAG UV radiation resistance associated -0.0187693
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) -0.0187081
SETD5 SET domain containing 5 -0.0183288
FLNB filamin B, beta -0.0181562
KRT8 keratin 8, type II -0.0177529
NDE1 nudE neurodevelopment protein 1 -0.0176716
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0175649
AP1S3 adaptor-related protein complex 1, sigma 3 subunit -0.0174374
KDM6A lysine (K)-specific demethylase 6A -0.0173765
ANKRD11 ankyrin repeat domain 11 -0.0172214
NHS Nance-Horan syndrome (congenital cataracts and dental anomalies) -0.0171817
UBAC2 UBA domain containing 2 -0.0166833
ZFC3H1 zinc finger, C3H1-type containing -0.0165557
MARK3 MAP/microtubule affinity-regulating kinase 3 -0.0164953
RIN2 Ras and Rab interactor 2 -0.0162633
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 -0.0162262
STRN3 striatin, calmodulin binding protein 3 -0.0161922
TAS2R14 taste receptor, type 2, member 14 -0.0161823
PTK2 protein tyrosine kinase 2 -0.0161379
RIMS2 regulating synaptic membrane exocytosis 2 -0.0160935
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0156832
GPC6 glypican 6 -0.0155912
TPD52 tumor protein D52 -0.0149451
KANSL1 KAT8 regulatory NSL complex subunit 1 -0.0147692
ARFGEF2 ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) -0.01474
UBE2E2 ubiquitin-conjugating enzyme E2E 2 -0.0146359
PAN3 PAN3 poly(A) specific ribonuclease subunit -0.0146267
RAB1A RAB1A, member RAS oncogene family -0.0142195
CAMTA1 calmodulin binding transcription activator 1 -0.0141563
CELSR1 cadherin, EGF LAG seven-pass G-type receptor 1 -0.0141092
TSC22D2 TSC22 domain family, member 2 -0.0139122
MAP3K5 mitogen-activated protein kinase kinase kinase 5 -0.013787
ITFG1 integrin alpha FG-GAP repeat containing 1 -0.0137624
ZFAND3 zinc finger, AN1-type domain 3 -0.0137408
SREBF2 sterol regulatory element binding transcription factor 2 -0.0136709
CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 -0.0135164
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.01346
EHBP1 EH domain binding protein 1 -0.0134326
PPP2R2C protein phosphatase 2, regulatory subunit B, gamma -0.0133814
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A -0.0132751
OSMR oncostatin M receptor -0.0132594
DIP2B DIP2 disco-interacting protein 2 homolog B (Drosophila) -0.0129876
GRB10 growth factor receptor-bound protein 10 -0.0129468
KDM3A lysine (K)-specific demethylase 3A -0.0128279
CERT1 ceramide transporter 1 -0.0127843
SUPT3H suppressor of Ty 3 homolog (S. cerevisiae) -0.012682
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0126346
PPP1CB protein phosphatase 1, catalytic subunit, beta isozyme -0.0125643
MYH9 myosin, heavy chain 9, non-muscle -0.0124063
CTBP2 C-terminal binding protein 2 -0.0123688
NGLY1 N-glycanase 1 -0.0122776
ANO6 anoctamin 6 -0.0122713
CAPZA1 capping protein (actin filament) muscle Z-line, alpha 1 -0.0122332
SHB Src homology 2 domain containing adaptor protein B -0.0121903
SUCO SUN domain containing ossification factor -0.0121817
SMAD2 SMAD family member 2 -0.01204
SLC35F3 solute carrier family 35, member F3 -0.0120335
MAP3K4 mitogen-activated protein kinase kinase kinase 4 -0.0118325
GLG1 golgi glycoprotein 1 -0.01174
ATRX alpha thalassemia/mental retardation syndrome X-linked -0.0117399