Encorafenib_NCI-H2030 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Encorafenib perturbation in NCI-H2030 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Encorafenib_NCI-H2030 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FTH1 ferritin, heavy polypeptide 1 0.0551773
IGF2 insulin-like growth factor 2 0.0485639
EEF2 eukaryotic translation elongation factor 2 0.047308
CCL5 chemokine (C-C motif) ligand 5 0.0354049
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0308024
RPS12 ribosomal protein S12 0.027306
TIMP1 TIMP metallopeptidase inhibitor 1 0.0257828
RPS2 ribosomal protein S2 0.0247483
CYP24A1 cytochrome P450, family 24, subfamily A, polypeptide 1 0.0232564
RAB7A RAB7A, member RAS oncogene family 0.0212582
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 0.0208621
PCBP2 poly(rC) binding protein 2 0.0182638
FOSB FBJ murine osteosarcoma viral oncogene homolog B 0.0178518
FLNA filamin A, alpha 0.0172327
CXCL8 chemokine (C-X-C motif) ligand 8 0.0164439
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0163283
MCL1 myeloid cell leukemia 1 0.0158981
FOS FBJ murine osteosarcoma viral oncogene homolog 0.0153955
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0142095
NCKAP1 NCK-associated protein 1 0.0141043
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0134226
NFE2L1 nuclear factor, erythroid 2-like 1 0.0133656
SMOC1 SPARC related modular calcium binding 1 0.0133357
HLA-A major histocompatibility complex, class I, A 0.0133341
NDRG1 N-myc downstream regulated 1 0.0130397
SIK3 SIK family kinase 3 0.0125077
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0121483
BRD2 bromodomain containing 2 0.0118746
PHLDB2 pleckstrin homology-like domain, family B, member 2 0.0118068
SFTPA2 surfactant protein A2 0.0115608
PCBP1 poly(rC) binding protein 1 0.0114409
TERF2IP telomeric repeat binding factor 2, interacting protein 0.0113437
DDIT4 DNA-damage-inducible transcript 4 0.01133
LOC102724023 ES1 protein homolog, mitochondrial 0.0112891
AKAP9 A kinase (PRKA) anchor protein 9 0.011153
IL6 interleukin 6 0.0104981
MT1X metallothionein 1X 0.0103045
RNASEH2A ribonuclease H2, subunit A 0.0102324
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha 0.00981274
ICAM1 intercellular adhesion molecule 1 0.00945065
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.00907005
DCAF8 DDB1 and CUL4 associated factor 8 0.00906211
RCOR1 REST corepressor 1 0.00886265
EIF5 eukaryotic translation initiation factor 5 0.00884263
UBAP2L ubiquitin associated protein 2-like 0.00877276
GADD45B growth arrest and DNA-damage-inducible, beta 0.00857712
LRRC23 leucine rich repeat containing 23 0.00850041
CXCL2 chemokine (C-X-C motif) ligand 2 0.00845911
NUP58 nucleoporin 58 0.00844934
GTF2A1 general transcription factor IIA, 1, 19/37kDa 0.00835162
PIK3R3 phosphoinositide-3-kinase, regulatory subunit 3 (gamma) 0.00833975
UBR3 ubiquitin protein ligase E3 component n-recognin 3 (putative) 0.00820195
SFPQ splicing factor proline/glutamine-rich 0.00817858
CD68 CD68 molecule 0.00805709
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.00798527
KMT2D lysine (K)-specific methyltransferase 2D 0.00787759
MMADHC methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria 0.00781801
KDM3B lysine (K)-specific demethylase 3B 0.00781743
RPS27 ribosomal protein S27 0.0077599
ZEB1 zinc finger E-box binding homeobox 1 0.00766242
PEA15 phosphoprotein enriched in astrocytes 15 0.00764522
LAMA5 laminin, alpha 5 0.00763295
MAMLD1 mastermind-like domain containing 1 0.00762107
CHD1 chromodomain helicase DNA binding protein 1 0.0075288
SEMA4A sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A 0.00748332
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.00744563
RUNX1 runt-related transcription factor 1 0.00740233
MYO10 myosin X 0.00734775
CCNL1 cyclin L1 0.00722913
AXL AXL receptor tyrosine kinase 0.00715622
FGF18 fibroblast growth factor 18 0.00713882
TUBB4B tubulin, beta 4B class IVb 0.00707304
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.00706655
PLP2 proteolipid protein 2 (colonic epithelium-enriched) 0.00705795
SKI SKI proto-oncogene 0.00699409
CRKL v-crk avian sarcoma virus CT10 oncogene homolog-like 0.00697944
PPM1A protein phosphatase, Mg2+/Mn2+ dependent, 1A 0.00684272
TNKS tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 0.00676851
CRLF2 cytokine receptor-like factor 2 0.00672142
CCDC138 coiled-coil domain containing 138 0.00661168
EIF2S2 eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa 0.00653023
NXF1 nuclear RNA export factor 1 0.00652758
CYB5R3 cytochrome b5 reductase 3 0.00649858
IRAK2 interleukin-1 receptor-associated kinase 2 0.00641171
PRKN parkin RBR E3 ubiquitin protein ligase 0.00639109
KLRD1 killer cell lectin-like receptor subfamily D, member 1 0.00633102
SNX31 sorting nexin 31 0.00622384
TMF1 TATA element modulatory factor 1 0.00621956
KDM6A lysine (K)-specific demethylase 6A 0.00619505
SPX spexin hormone 0.00618696
PDE4C phosphodiesterase 4C, cAMP-specific 0.00608783
BTRC beta-transducin repeat containing E3 ubiquitin protein ligase 0.00604792
PSEN1 presenilin 1 0.00604215
TESK2 testis-specific kinase 2 0.00595876
BAIAP2 BAI1-associated protein 2 0.00594058
HYCC1 hyccin PI4KA lipid kinase complex subunit 1 0.00592808
MLF1 myeloid leukemia factor 1 0.00592371
SF3B1 splicing factor 3b, subunit 1, 155kDa 0.00589511
B2M beta-2-microglobulin 0.00588075
KCMF1 potassium channel modulatory factor 1 0.00586931

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.412063
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.162152
TMSB10 thymosin beta 10 -0.150681
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.128605
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) -0.128127
VIM vimentin -0.118547
PTMA prothymosin, alpha -0.0979614
TM4SF1 transmembrane 4 L six family member 1 -0.094422
AHNAK AHNAK nucleoprotein -0.0923608
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0859168
PDE4D phosphodiesterase 4D, cAMP-specific -0.0835694
ACTG1 actin gamma 1 -0.0834224
RPL19 ribosomal protein L19 -0.0790857
TFPI2 tissue factor pathway inhibitor 2 -0.0786679
THSD4 thrombospondin, type I, domain containing 4 -0.0784974
AKAP12 A kinase (PRKA) anchor protein 12 -0.0717323
IER3 immediate early response 3 -0.0710103
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.064674
CMIP c-Maf inducing protein -0.0634871
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 -0.0631683
S100A6 S100 calcium binding protein A6 -0.0622531
S100A10 S100 calcium binding protein A10 -0.0584722
ASPH aspartate beta-hydroxylase -0.0571887
BASP1 brain abundant, membrane attached signal protein 1 -0.0567663
SAMD4A sterile alpha motif domain containing 4A -0.0565936
TPT1 tumor protein, translationally-controlled 1 -0.0560709
CAVIN1 caveolae associated protein 1 -0.0554186
TPM4 tropomyosin 4 -0.0552752
DST dystonin -0.0545312
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.054411
RPS21 ribosomal protein S21 -0.0528001
AP2B1 adaptor-related protein complex 2, beta 1 subunit -0.0515082
FTL ferritin, light polypeptide -0.0506981
BICC1 BicC family RNA binding protein 1 -0.0493217
ERBIN erbb2 interacting protein -0.0487519
RPS6 ribosomal protein S6 -0.0475753
TXNRD1 thioredoxin reductase 1 -0.0458209
ENO1 enolase 1, (alpha) -0.0453816
SLC38A2 solute carrier family 38, member 2 -0.0449126
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0439094
NQO1 NAD(P)H dehydrogenase, quinone 1 -0.0429049
CANX calnexin -0.0427705
TRIO trio Rho guanine nucleotide exchange factor -0.0423706
C15ORF48 chromosome 15 open reading frame 48 -0.0415328
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0404473
DOCK4 dedicator of cytokinesis 4 -0.0403413
ANXA2 annexin A2 -0.0402221
RPS4Y1 ribosomal protein S4, Y-linked 1 -0.0396951
GRAMD1B GRAM domain containing 1B -0.0396109
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) -0.0391807
NEGR1 neuronal growth regulator 1 -0.0390779
SRGN serglycin -0.0389562
SVIL supervillin -0.0383333
PM20D1 peptidase M20 domain containing 1 -0.0378595
RERE arginine-glutamic acid dipeptide (RE) repeats -0.0376003
UBASH3B ubiquitin associated and SH3 domain containing B -0.0375944
EFNA5 ephrin-A5 -0.0374061
VCL vinculin -0.03713
S100A9 S100 calcium binding protein A9 -0.0367872
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0363501
PKM pyruvate kinase, muscle -0.0363166
MAML3 mastermind-like 3 (Drosophila) -0.0359762
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa -0.0354057
SHANK2 SH3 and multiple ankyrin repeat domains 2 -0.0353209
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0351321
UTRN utrophin -0.0350878
IGFBP4 insulin-like growth factor binding protein 4 -0.0348355
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0343814
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) -0.0341617
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0339206
APP amyloid beta (A4) precursor protein -0.0338808
FMNL2 formin-like 2 -0.0337554
LDHA lactate dehydrogenase A -0.0334946
RPS15 ribosomal protein S15 -0.0334488
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.033356
PDE8A phosphodiesterase 8A -0.0331547
PRKDC protein kinase, DNA-activated, catalytic polypeptide -0.032961
RPS25 ribosomal protein S25 -0.0325851
RPS24 ribosomal protein S24 -0.0325728
RPL8 ribosomal protein L8 -0.0322261
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 -0.0321466
RPS29 ribosomal protein S29 -0.0320903
ELL2 elongation factor, RNA polymerase II, 2 -0.0320744
CFDP1 craniofacial development protein 1 -0.0320641
STC1 stanniocalcin 1 -0.0319954
TPI1 triosephosphate isomerase 1 -0.0312422
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0311658
RPS23 ribosomal protein S23 -0.0311303
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0311263
PYGL phosphorylase, glycogen, liver -0.0307398
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0306467
ZMYND8 zinc finger, MYND-type containing 8 -0.0305057
MYOF myoferlin -0.030405
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0302928
ARHGEF28 Rho guanine nucleotide exchange factor (GEF) 28 -0.0302649
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0300154
PPIB peptidylprolyl isomerase B (cyclophilin B) -0.0297311
CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 -0.0297126
RPLP0 ribosomal protein, large, P0 -0.0296596
XRCC5 X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining) -0.0292995