Encorafenib_NCI-H2122 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Encorafenib perturbation in NCI-H2122 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Encorafenib_NCI-H2122 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
IGF2 insulin-like growth factor 2 0.254407
PDE4D phosphodiesterase 4D, cAMP-specific 0.151437
FN1 fibronectin 1 0.0946294
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0944704
TRIO trio Rho guanine nucleotide exchange factor 0.0870606
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.0850714
FNDC3B fibronectin type III domain containing 3B 0.0815086
EXT1 exostosin glycosyltransferase 1 0.076193
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0732312
NDRG1 N-myc downstream regulated 1 0.0655294
CDH13 cadherin 13 0.0650794
SPDYA speedy/RINGO cell cycle regulator family member A 0.0639131
NALF1 NALCN channel auxiliary factor 1 0.0629504
CDH11 cadherin 11, type 2, OB-cadherin (osteoblast) 0.0625835
ZSWIM6 zinc finger, SWIM-type containing 6 0.06038
ATXN1 ataxin 1 0.0571938
PGK1 phosphoglycerate kinase 1 0.0569901
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0543021
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide 0.053537
SLC7A2 solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 0.052948
CD44 CD44 molecule (Indian blood group) 0.0518116
LPP LIM domain containing preferred translocation partner in lipoma 0.0509488
DST dystonin 0.0507623
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0504739
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0502124
PTK2 protein tyrosine kinase 2 0.050038
SLC38A2 solute carrier family 38, member 2 0.0497783
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 0.0488358
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0484966
COL5A2 collagen, type V, alpha 2 0.0482945
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 0.0480793
VMP1 vacuole membrane protein 1 0.0476206
FBXW7 F-box and WD repeat domain containing 7, E3 ubiquitin protein ligase 0.0476025
PDE10A phosphodiesterase 10A 0.0471171
RPLP1 ribosomal protein, large, P1 0.0468201
YTHDC1 YTH domain containing 1 0.0466599
NHS Nance-Horan syndrome (congenital cataracts and dental anomalies) 0.0462234
VIM vimentin 0.046212
EGFR epidermal growth factor receptor 0.0459781
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0455369
RAB7A RAB7A, member RAS oncogene family 0.0454764
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 0.0454119
PM20D1 peptidase M20 domain containing 1 0.0444664
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0443712
SRRM2 serine/arginine repetitive matrix 2 0.0440156
PDLIM5 PDZ and LIM domain 5 0.0435717
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0434718
CACNA2D3 calcium channel, voltage-dependent, alpha 2/delta subunit 3 0.0424416
CXCL8 chemokine (C-X-C motif) ligand 8 0.042075
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0410928
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0410671
LSAMP limbic system-associated membrane protein 0.0402455
KYNU kynureninase 0.040238
ALCAM activated leukocyte cell adhesion molecule 0.0400186
ERN1 endoplasmic reticulum to nucleus signaling 1 0.0398151
MAP7 microtubule-associated protein 7 0.0398065
BIRC6 baculoviral IAP repeat containing 6 0.0393149
AREG amphiregulin 0.0390847
INTS6 integrator complex subunit 6 0.038739
TRIM2 tripartite motif containing 2 0.0379154
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0377559
RPL37 ribosomal protein L37 0.037744
GPC6 glypican 6 0.0376452
STAU1 staufen double-stranded RNA binding protein 1 0.0375226
PCSK5 proprotein convertase subtilisin/kexin type 5 0.0374032
MACF1 microtubule-actin crosslinking factor 1 0.0372414
RNF145 ring finger protein 145 0.0371013
F3 coagulation factor III (thromboplastin, tissue factor) 0.0370725
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) 0.0365837
WWC1 WW and C2 domain containing 1 0.0364521
NRXN3 neurexin 3 0.0361552
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0361466
CTBP2 C-terminal binding protein 2 0.0361094
CALD1 caldesmon 1 0.0359167
P3H2 prolyl 3-hydroxylase 2 0.0353816
PCCA propionyl CoA carboxylase, alpha polypeptide 0.0352419
TNS3 tensin 3 0.0351694
PLEKHA5 pleckstrin homology domain containing, family A member 5 0.0350297
ERC1 ELKS/RAB6-interacting/CAST family member 1 0.0347303
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0346925
EPSTI1 epithelial stromal interaction 1 (breast) 0.0346048
HLA-A major histocompatibility complex, class I, A 0.0339036
TPT1 tumor protein, translationally-controlled 1 0.0337132
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 0.0332988
FTH1 ferritin, heavy polypeptide 1 0.0332152
GLIS3 GLIS family zinc finger 3 0.0329264
PDE3A phosphodiesterase 3A, cGMP-inhibited 0.0326678
RPL12 ribosomal protein L12 0.0323593
SBF2 SET binding factor 2 0.0321941
LAMC2 laminin, gamma 2 0.0318922
KDM4C lysine (K)-specific demethylase 4C 0.0318008
BCKDHB branched chain keto acid dehydrogenase E1, beta polypeptide 0.031629
EGR1 early growth response 1 0.0314229
VPS13B vacuolar protein sorting 13 homolog B (yeast) 0.0313765
RTN3 reticulon 3 0.0312857
ZKSCAN1 zinc finger with KRAB and SCAN domains 1 0.0311552
METTL15 methyltransferase like 15 0.030762
GLCCI1 glucocorticoid induced 1 0.0307125
KIF2A kinesin heavy chain member 2A 0.0306895
PDXDC1 pyridoxal-dependent decarboxylase domain containing 1 0.0306833

decreased expression

Symbol Name Standardized Value
NPEPPS aminopeptidase puromycin sensitive -0.12234
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase -0.118578
AHNAK AHNAK nucleoprotein -0.110977
ATOSA atos homolog A -0.0994647
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0964411
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0952529
LMO7 LIM domain 7 -0.0909497
DSCAM Down syndrome cell adhesion molecule -0.0902717
KANSL1 KAT8 regulatory NSL complex subunit 1 -0.0863968
ABHD17C abhydrolase domain containing 17C -0.0717145
ITCH itchy E3 ubiquitin protein ligase -0.0678668
TXNIP thioredoxin interacting protein -0.0639332
NEBL nebulette -0.0623658
ANXA2 annexin A2 -0.0614046
PARD3 par-3 family cell polarity regulator -0.0610758
RSAD2 radical S-adenosyl methionine domain containing 2 -0.0606128
KIAA1217 KIAA1217 -0.0581016
GULP1 GULP, engulfment adaptor PTB domain containing 1 -0.0573761
KATNBL1 katanin p80 subunit B-like 1 -0.0567158
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 -0.0558764
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa -0.0557532
DOCK5 dedicator of cytokinesis 5 -0.0552496
CNOT2 CCR4-NOT transcription complex, subunit 2 -0.0549886
GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) -0.0524286
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0515646
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 -0.050238
NBEA neurobeachin -0.0502068
ENO1 enolase 1, (alpha) -0.0464275
NF1 neurofibromin 1 -0.0458539
FBXL20 F-box and leucine-rich repeat protein 20 -0.0452465
USP53 ubiquitin specific peptidase 53 -0.0449149
KIAA1671 KIAA1671 -0.0445606
OGA O-GlcNAcase -0.0443784
ZNF638 zinc finger protein 638 -0.0440065
FOXO3 forkhead box O3 -0.0427067
CAPN2 calpain 2, (m/II) large subunit -0.0420225
PERP PERP, TP53 apoptosis effector -0.0418055
TMTC2 transmembrane and tetratricopeptide repeat containing 2 -0.0417416
LAMB3 laminin, beta 3 -0.0412579
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 -0.0412562
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.041182
GRB10 growth factor receptor-bound protein 10 -0.0406847
DNAJC1 DnaJ (Hsp40) homolog, subfamily C, member 1 -0.0403276
SMURF1 SMAD specific E3 ubiquitin protein ligase 1 -0.0400096
ZMYM2 zinc finger, MYM-type 2 -0.0393796
FMN1 formin 1 -0.0393473
ARHGAP5 Rho GTPase activating protein 5 -0.0386078
MAPK6 mitogen-activated protein kinase 6 -0.038498
ZFC3H1 zinc finger, C3H1-type containing -0.0383059
HOOK3 hook microtubule-tethering protein 3 -0.0379396
RIGI RNA sensor RIG-I -0.0379048
PLS3 plastin 3 -0.0378755
FAM13A family with sequence similarity 13, member A -0.0378683
RBM47 RNA binding motif protein 47 -0.0377609
BZW1 basic leucine zipper and W2 domains 1 -0.0373159
UBE2H ubiquitin-conjugating enzyme E2H -0.0363039
MARCHF7 membrane associated ring-CH-type finger 7 -0.0362056
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 -0.036141
LNPEP leucyl/cystinyl aminopeptidase -0.0361245
CDC42 cell division cycle 42 -0.035944
UBA6 ubiquitin-like modifier activating enzyme 6 -0.0353039
RALGAPA2 Ral GTPase activating protein, alpha subunit 2 (catalytic) -0.0351173
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 -0.0351064
PPARD peroxisome proliferator-activated receptor delta -0.0349985
LOC112694756 uncharaterized LOC112694756 -0.0349339
ZFAND3 zinc finger, AN1-type domain 3 -0.0346402
NCOA6 nuclear receptor coactivator 6 -0.0346028
MTSS1 metastasis suppressor 1 -0.0344808
MYO5A myosin VA (heavy chain 12, myoxin) -0.0344369
SQSTM1 sequestosome 1 -0.0343864
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0342877
NCOA2 nuclear receptor coactivator 2 -0.0341162
FOXO1 forkhead box O1 -0.0340846
SAMD9 sterile alpha motif domain containing 9 -0.0339401
WDR45B WD repeat domain 45B -0.0338029
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0336774
WSB1 WD repeat and SOCS box containing 1 -0.0334999
WASF2 WAS protein family, member 2 -0.0334566
MAML3 mastermind-like 3 (Drosophila) -0.0333506
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0332237
DSG2 desmoglein 2 -0.0331195
TNRC6B trinucleotide repeat containing 6B -0.0331042
MINDY2 MINDY lysine 48 deubiquitinase 2 -0.032764
CEMIP cell migration inducing protein, hyaluronan binding -0.0327164
PACS1 phosphofurin acidic cluster sorting protein 1 -0.032578
WARS1 tryptophanyl-tRNA synthetase 1 -0.0325292
SCEL sciellin -0.0324969
MYO5C myosin VC -0.0324701
BMAL2 basic helix-loop-helix ARNT like 2 -0.0323567
KDM2A lysine (K)-specific demethylase 2A -0.0321678
UBAP1 ubiquitin associated protein 1 -0.0320598
CDK12 cyclin-dependent kinase 12 -0.0319879
GOLGB1 golgin B1 -0.0319203
SESTD1 SEC14 and spectrin domains 1 -0.0315891
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 -0.0315227
NT5C2 5'-nucleotidase, cytosolic II -0.0311984
RBM25 RNA binding motif protein 25 -0.031074
CYTH1 cytohesin 1 -0.0310215
PIP4K2A phosphatidylinositol-5-phosphate 4-kinase, type II, alpha -0.0309465
MYCBP2 MYC binding protein 2, E3 ubiquitin protein ligase -0.0307887