Encorafenib_NCI-H23 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Encorafenib perturbation in NCI-H23 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Encorafenib_NCI-H23 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PDE4D phosphodiesterase 4D, cAMP-specific 0.0595014
EEF2 eukaryotic translation elongation factor 2 0.0484719
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 0.0430415
IFI6 interferon, alpha-inducible protein 6 0.0418833
PDE10A phosphodiesterase 10A 0.0413796
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0380933
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0296884
WWOX WW domain containing oxidoreductase 0.0295237
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0273629
ATP1B3 ATPase, Na+/K+ transporting, beta 3 polypeptide 0.0264372
RNF213 ring finger protein 213 0.0252154
AEBP2 AE binding protein 2 0.0239854
RPS3 ribosomal protein S3 0.023576
PARP14 poly (ADP-ribose) polymerase family, member 14 0.0219612
SNAP25 synaptosomal-associated protein, 25kDa 0.0216928
BMP5 bone morphogenetic protein 5 0.0216793
ZSWIM6 zinc finger, SWIM-type containing 6 0.0212393
DENND5B DENN/MADD domain containing 5B 0.0206981
PRH1 proline-rich protein HaeIII subfamily 1 0.0204423
FNDC3B fibronectin type III domain containing 3B 0.019775
NR4A3 nuclear receptor subfamily 4, group A, member 3 0.0177102
INTS6 integrator complex subunit 6 0.0174476
HLA-B major histocompatibility complex, class I, B 0.0174109
RPL37A ribosomal protein L37a 0.0172486
ANKS1B ankyrin repeat and sterile alpha motif domain containing 1B 0.0168217
MACROD2 MACRO domain containing 2 0.0167585
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) 0.0165687
LRP1B low density lipoprotein receptor-related protein 1B 0.0164544
RPS12 ribosomal protein S12 0.0161862
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.016167
EGR1 early growth response 1 0.0160887
ADARB2 adenosine deaminase, RNA-specific, B2 (non-functional) 0.015818
NCOA7 nuclear receptor coactivator 7 0.0158003
LOC102724023 ES1 protein homolog, mitochondrial 0.0157845
ATF6 activating transcription factor 6 0.0157489
BBS9 Bardet-Biedl syndrome 9 0.0150313
LPP LIM domain containing preferred translocation partner in lipoma 0.0149824
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 0.0147682
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 0.014116
VIM vimentin 0.0134323
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0134084
REL v-rel avian reticuloendotheliosis viral oncogene homolog 0.0129578
BPTF bromodomain PHD finger transcription factor 0.0129525
MBNL2 muscleblind-like splicing regulator 2 0.0127154
PCLO piccolo presynaptic cytomatrix protein 0.0124635
RPL37 ribosomal protein L37 0.0124135
SIK3 SIK family kinase 3 0.0123832
RPS8 ribosomal protein S8 0.012375
PRELID2 PRELI domain containing 2 0.012328
SFTPA2 surfactant protein A2 0.0121007
PDE4B phosphodiesterase 4B, cAMP-specific 0.0119799
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0118768
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0117149
ATXN1 ataxin 1 0.0116065
ADAR adenosine deaminase, RNA-specific 0.0115194
ERC1 ELKS/RAB6-interacting/CAST family member 1 0.0114954
HOMER1 homer scaffolding protein 1 0.0113826
UBAP2L ubiquitin associated protein 2-like 0.0110619
VCL vinculin 0.0109188
ANK2 ankyrin 2, neuronal 0.0106762
RPS17 ribosomal protein S17 0.0106712
DDIT3 DNA-damage-inducible transcript 3 0.0106679
RABGAP1L RAB GTPase activating protein 1-like 0.010523
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 0.0104352
PCDH7 protocadherin 7 0.0103897
RPS27 ribosomal protein S27 0.0103417
PMEPA1 prostate transmembrane protein, androgen induced 1 0.0102611
TAPBP TAP binding protein (tapasin) 0.0100655
IGF2 insulin-like growth factor 2 0.0100153
TFAP2A transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha) 0.00992721
NR4A2 nuclear receptor subfamily 4, group A, member 2 0.0098812
FTL ferritin, light polypeptide 0.00977604
IARS1 isoleucyl-tRNA synthetase 1 0.00965541
NLGN1 neuroligin 1 0.00959738
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 0.00954545
OAS3 2'-5'-oligoadenylate synthetase 3, 100kDa 0.00949081
RPS2 ribosomal protein S2 0.0094637
NFE2L1 nuclear factor, erythroid 2-like 1 0.00938622
MRTFA myocardin related transcription factor A 0.00931511
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.00914015
FARS2 phenylalanyl-tRNA synthetase 2, mitochondrial 0.00913422
ADA adenosine deaminase 0.00912182
DST dystonin 0.00905581
ZBTB10 zinc finger and BTB domain containing 10 0.00901786
RIMS2 regulating synaptic membrane exocytosis 2 0.0089955
DTX3L deltex 3 like, E3 ubiquitin ligase 0.00896992
NRDC nardilysin convertase 0.00896612
RSU1 Ras suppressor protein 1 0.00889967
TENM3 teneurin transmembrane protein 3 0.00882152
CALR calreticulin 0.00875368
PCBP1 poly(rC) binding protein 1 0.00872085
XPOT exportin, tRNA 0.0084872
MSRB3 methionine sulfoxide reductase B3 0.0084784
DSPP dentin sialophosphoprotein 0.00847315
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.00844096
CREBBP CREB binding protein 0.00843911
CNOT1 CCR4-NOT transcription complex, subunit 1 0.00839709
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like 0.00829227
B2M beta-2-microglobulin 0.00815398
RPL31 ribosomal protein L31 0.00810151

decreased expression

Symbol Name Standardized Value
AKAP12 A kinase (PRKA) anchor protein 12 -0.122172
TFPI2 tissue factor pathway inhibitor 2 -0.0900198
TRIO trio Rho guanine nucleotide exchange factor -0.0403728
RTN4 reticulon 4 -0.0379284
YBX3 Y box binding protein 3 -0.0370954
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0316314
KPNA4 karyopherin alpha 4 (importin alpha 3) -0.0304262
PHIP pleckstrin homology domain interacting protein -0.0296365
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0293449
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0286931
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0260135
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0254004
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 -0.0252428
MARCHF4 membrane associated ring-CH-type finger 4 -0.0248222
TM4SF1 transmembrane 4 L six family member 1 -0.0245189
CAPZA1 capping protein (actin filament) muscle Z-line, alpha 1 -0.0243774
OGA O-GlcNAcase -0.0237768
MYL12B myosin, light chain 12B, regulatory -0.0237485
TXNRD1 thioredoxin reductase 1 -0.0235736
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 -0.0226116
PTMA prothymosin, alpha -0.0221387
XPO1 exportin 1 -0.0219048
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0218033
CTTNBP2NL CTTNBP2 N-terminal like -0.0217169
GRAMD1B GRAM domain containing 1B -0.0210923
KDM3A lysine (K)-specific demethylase 3A -0.020889
RBM25 RNA binding motif protein 25 -0.0206849
NCAPD2 non-SMC condensin I complex, subunit D2 -0.0205309
THSD4 thrombospondin, type I, domain containing 4 -0.0205232
RUSC2 RUN and SH3 domain containing 2 -0.0200777
RICTOR RPTOR independent companion of MTOR, complex 2 -0.0198552
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0196167
FMNL2 formin-like 2 -0.0187061
SBF2 SET binding factor 2 -0.0186816
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0186589
PTK2 protein tyrosine kinase 2 -0.0183283
RPS21 ribosomal protein S21 -0.018091
MIS18BP1 MIS18 binding protein 1 -0.0175692
RB1CC1 RB1-inducible coiled-coil 1 -0.01752
BBX bobby sox homolog (Drosophila) -0.0173689
CDK17 cyclin-dependent kinase 17 -0.0172778
TMSB10 thymosin beta 10 -0.0171587
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0170383
SRPK1 SRSF protein kinase 1 -0.0169547
RBM39 RNA binding motif protein 39 -0.0169466
KDM2A lysine (K)-specific demethylase 2A -0.0167888
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0165639
NIPBL Nipped-B homolog (Drosophila) -0.0164284
ARID2 AT rich interactive domain 2 (ARID, RFX-like) -0.0161927
PCNX1 pecanex 1 -0.0161616
AHNAK AHNAK nucleoprotein -0.0160208
TPI1 triosephosphate isomerase 1 -0.0160114
MMP12 matrix metallopeptidase 12 -0.0159028
ZNF292 zinc finger protein 292 -0.0158982
RASA2 RAS p21 protein activator 2 -0.015722
TMEM165 transmembrane protein 165 -0.0157034
SRPK2 SRSF protein kinase 2 -0.0156653
ZFR zinc finger RNA binding protein -0.0154044
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0153906
ANO6 anoctamin 6 -0.0153396
SIPA1L1 signal-induced proliferation-associated 1 like 1 -0.0151846
CCND2 cyclin D2 -0.0150671
SPRED2 sprouty-related, EVH1 domain containing 2 -0.0148752
NCOR1 nuclear receptor corepressor 1 -0.0147471
SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 -0.0147197
PPME1 protein phosphatase methylesterase 1 -0.0146641
KLF7 Kruppel-like factor 7 (ubiquitous) -0.0146062
CTTN cortactin -0.0146005
NABP1 nucleic acid binding protein 1 -0.0144016
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.014312
SMC4 structural maintenance of chromosomes 4 -0.0141221
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0141083
MNAT1 MNAT CDK-activating kinase assembly factor 1 -0.0140683
PFKP phosphofructokinase, platelet -0.0139627
TRPC4AP transient receptor potential cation channel, subfamily C, member 4 associated protein -0.0138606
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa -0.0137919
EIF4A1 eukaryotic translation initiation factor 4A1 -0.0137796
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 -0.0136511
SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein -0.0134472
GOLGA4 golgin A4 -0.0134397
GATAD2B GATA zinc finger domain containing 2B -0.0134338
TFDP2 transcription factor Dp-2 (E2F dimerization partner 2) -0.0134071
KRT18 keratin 18, type I -0.0133599
SEPTIN10 septin 10 -0.013268
BRWD3 bromodomain and WD repeat domain containing 3 -0.0132405
SINHCAF SIN3-HDAC complex associated factor -0.0131789
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) -0.0131477
RRM2 ribonucleotide reductase M2 -0.0128553
KDM7A lysine (K)-specific demethylase 7A -0.0128401
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 -0.0127863
ZFAND3 zinc finger, AN1-type domain 3 -0.0127764
ANKRD12 ankyrin repeat domain 12 -0.0127615
EIF3A eukaryotic translation initiation factor 3, subunit A -0.0126507
CDYL chromodomain protein, Y-like -0.0124504
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.0124171
ATP5F1B ATP synthase F1 subunit beta -0.0124088
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0124036
ANXA5 annexin A5 -0.0123657
CAMTA1 calmodulin binding transcription activator 1 -0.0123613
MACF1 microtubule-actin crosslinking factor 1 -0.0123595