Encorafenib_NCI-H2347 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Encorafenib perturbation in NCI-H2347 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Encorafenib_NCI-H2347 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.12211
LAMC2 laminin, gamma 2 0.0609105
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0600977
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0479041
SAMD4A sterile alpha motif domain containing 4A 0.0423162
EXT1 exostosin glycosyltransferase 1 0.0418538
EFNA5 ephrin-A5 0.0387522
DTNA dystrobrevin, alpha 0.0350057
LPP LIM domain containing preferred translocation partner in lipoma 0.0340174
LMO7 LIM domain 7 0.0337188
TRIO trio Rho guanine nucleotide exchange factor 0.0325512
LAMB3 laminin, beta 3 0.0276823
MAP1B microtubule-associated protein 1B 0.0268462
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0254715
ERBIN erbb2 interacting protein 0.0243494
FBXO32 F-box protein 32 0.0242339
NAV2 neuron navigator 2 0.0235274
SMURF1 SMAD specific E3 ubiquitin protein ligase 1 0.0234536
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0214554
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0208512
TJP1 tight junction protein 1 0.0200226
EGFR epidermal growth factor receptor 0.0199088
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa 0.019787
VGLL3 vestigial-like family member 3 0.0196351
HDAC9 histone deacetylase 9 0.0188468
ACTG1 actin gamma 1 0.018761
RCOR1 REST corepressor 1 0.01865
ATXN1 ataxin 1 0.0183802
JARID2 jumonji, AT rich interactive domain 2 0.0183788
ZSWIM6 zinc finger, SWIM-type containing 6 0.0182345
MACF1 microtubule-actin crosslinking factor 1 0.0179402
CD44 CD44 molecule (Indian blood group) 0.0176821
CCND1 cyclin D1 0.0174544
MYO1E myosin IE 0.0174518
SVIL supervillin 0.0174341
MYO5B myosin VB 0.017293
CSNK1A1 casein kinase 1, alpha 1 0.0168708
FNIP1 folliculin interacting protein 1 0.0165093
SH3KBP1 SH3-domain kinase binding protein 1 0.0163871
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0162783
RASAL2 RAS protein activator like 2 0.0159401
AKAP13 A kinase (PRKA) anchor protein 13 0.0158391
LIMCH1 LIM and calponin homology domains 1 0.0155522
DST dystonin 0.0152886
FLNA filamin A, alpha 0.0151893
PLEC plectin 0.015075
ZBTB20 zinc finger and BTB domain containing 20 0.0148711
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.0148271
RALGPS2 Ral GEF with PH domain and SH3 binding motif 2 0.0145494
SEC31A SEC31 homolog A (S. cerevisiae) 0.014462
ANTXR2 anthrax toxin receptor 2 0.0142436
DSPP dentin sialophosphoprotein 0.0141271
KLF7 Kruppel-like factor 7 (ubiquitous) 0.0140609
ATP11A ATPase, class VI, type 11A 0.0140168
MYH9 myosin, heavy chain 9, non-muscle 0.0138564
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0137438
PEG10 paternally expressed 10 0.0136334
FER fer (fps/fes related) tyrosine kinase 0.0135497
CLTC clathrin, heavy chain (Hc) 0.0134428
MICAL3 microtubule associated monooxygenase, calponin and LIM domain containing 3 0.0134323
ERRFI1 ERBB receptor feedback inhibitor 1 0.013202
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0131426
TUBB4B tubulin, beta 4B class IVb 0.013138
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0130693
ARHGAP5 Rho GTPase activating protein 5 0.0130313
BLZF1 basic leucine zipper nuclear factor 1 0.0130287
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A 0.0128642
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.012681
SBF2 SET binding factor 2 0.0126639
NUMB numb homolog (Drosophila) 0.012427
ITCH itchy E3 ubiquitin protein ligase 0.012421
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0121515
FN1 fibronectin 1 0.0121183
PPP2R3A protein phosphatase 2, regulatory subunit B'', alpha 0.0121083
MAML2 mastermind-like 2 (Drosophila) 0.0119927
MCTP2 multiple C2 domains, transmembrane 2 0.0119315
EEF2 eukaryotic translation elongation factor 2 0.0118657
PRKCA protein kinase C, alpha 0.0118449
MACC1 metastasis associated in colon cancer 1 0.0117372
JUP junction plakoglobin 0.0117035
EGR1 early growth response 1 0.0116681
NF1 neurofibromin 1 0.0115917
SIPA1L1 signal-induced proliferation-associated 1 like 1 0.0114875
GOLGB1 golgin B1 0.011406
KLF6 Kruppel-like factor 6 0.0111807
ANKRD17 ankyrin repeat domain 17 0.0110815
PGBD5 piggyBac transposable element derived 5 0.0110644
KLF12 Kruppel-like factor 12 0.0110572
SPSB1 splA/ryanodine receptor domain and SOCS box containing 1 0.011053
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) 0.0109697
ZBTB38 zinc finger and BTB domain containing 38 0.0107216
DAPP1 dual adaptor of phosphotyrosine and 3-phosphoinositides 0.0105844
FGD4 FYVE, RhoGEF and PH domain containing 4 0.0105541
CAB39 calcium binding protein 39 0.0105514
BTBD9 BTB (POZ) domain containing 9 0.0104222
MAP4 microtubule-associated protein 4 0.0103887
SCFD1 sec1 family domain containing 1 0.0103879
ANO6 anoctamin 6 0.0102365
INTS6 integrator complex subunit 6 0.0101542
PPARD peroxisome proliferator-activated receptor delta 0.0101395

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.168383
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.134881
FTL ferritin, light polypeptide -0.106543
TSC22D2 TSC22 domain family, member 2 -0.0841947
PTMA prothymosin, alpha -0.0799913
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0762978
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.060361
S100A6 S100 calcium binding protein A6 -0.0544053
FAM13A family with sequence similarity 13, member A -0.0457431
POTEF POTE ankyrin domain family, member F -0.0445075
TMSB10 thymosin beta 10 -0.0390827
NDRG1 N-myc downstream regulated 1 -0.0377443
RPS6 ribosomal protein S6 -0.0375521
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0369783
UBC ubiquitin C -0.0362176
G0S2 G0/G1 switch 2 -0.0358219
FXR1 fragile X mental retardation, autosomal homolog 1 -0.0353818
FAM162A family with sequence similarity 162, member A -0.0342656
S100A10 S100 calcium binding protein A10 -0.0327238
NPEPPS aminopeptidase puromycin sensitive -0.0326969
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0326295
NAMPT nicotinamide phosphoribosyltransferase -0.032095
MAP4K5 mitogen-activated protein kinase kinase kinase kinase 5 -0.031848
RNF145 ring finger protein 145 -0.031193
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0305782
RPL8 ribosomal protein L8 -0.0295245
ADAM9 ADAM metallopeptidase domain 9 -0.0278984
KMT2E lysine (K)-specific methyltransferase 2E -0.0252972
LOC112694756 uncharaterized LOC112694756 -0.0247853
PKM pyruvate kinase, muscle -0.0245929
IFITM3 interferon induced transmembrane protein 3 -0.0240102
IGFBP3 insulin-like growth factor binding protein 3 -0.0238815
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha -0.0237798
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0237699
CANX calnexin -0.0236807
RPLP1 ribosomal protein, large, P1 -0.0235333
SQSTM1 sequestosome 1 -0.0234294
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.0232747
QKI QKI, KH domain containing, RNA binding -0.0226264
DSTN destrin (actin depolymerizing factor) -0.0225741
LDHA lactate dehydrogenase A -0.0225151
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A -0.0222005
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa -0.0220697
TPI1 triosephosphate isomerase 1 -0.0220064
RLF rearranged L-myc fusion -0.022
TFG TRK-fused gene -0.0219944
RPS23 ribosomal protein S23 -0.0219109
RHOA ras homolog family member A -0.0217683
EIF1 eukaryotic translation initiation factor 1 -0.0214536
TPT1 tumor protein, translationally-controlled 1 -0.0211517
RYBP RING1 and YY1 binding protein -0.0211432
SSBP2 single-stranded DNA binding protein 2 -0.0209973
GARS1 glycyl-tRNA synthetase 1 -0.0208656
LY6E lymphocyte antigen 6 complex, locus E -0.0208382
USP3 ubiquitin specific peptidase 3 -0.0208367
PGK1 phosphoglycerate kinase 1 -0.0207621
HILPDA hypoxia inducible lipid droplet-associated -0.0205648
PCBP2 poly(rC) binding protein 2 -0.0205463
MT2A metallothionein 2A -0.0205248
ZNF292 zinc finger protein 292 -0.0200942
RPLP0 ribosomal protein, large, P0 -0.0198441
RHEB Ras homolog enriched in brain -0.0198385
KDM5B lysine (K)-specific demethylase 5B -0.0196961
SDC4 syndecan 4 -0.0193009
RBM39 RNA binding motif protein 39 -0.0192793
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0191285
FOSL1 FOS-like antigen 1 -0.0187105
B2M beta-2-microglobulin -0.0184226
RPL28 ribosomal protein L28 -0.0182628
CAPZA2 capping protein (actin filament) muscle Z-line, alpha 2 -0.0180805
RPLP2 ribosomal protein, large, P2 -0.0180183
IFITM1 interferon induced transmembrane protein 1 -0.0178629
MXD1 MAX dimerization protein 1 -0.0178108
SETD5 SET domain containing 5 -0.017454
TOP1 topoisomerase (DNA) I -0.0172024
HLA-A major histocompatibility complex, class I, A -0.0171811
CCNL1 cyclin L1 -0.0170736
RPL32 ribosomal protein L32 -0.0170138
APLP2 amyloid beta (A4) precursor-like protein 2 -0.0169401
RAD21 RAD21 homolog (S. pombe) -0.0167545
AREG amphiregulin -0.0165555
DEK DEK proto-oncogene -0.0165551
RPS19 ribosomal protein S19 -0.0165101
LMAN1 lectin, mannose-binding, 1 -0.0162575
S100A9 S100 calcium binding protein A9 -0.0160267
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0159842
RPL35A ribosomal protein L35a -0.0159789
MARCHF6 membrane associated ring-CH-type finger 6 -0.0158542
ENO1 enolase 1, (alpha) -0.0156376
GNAS GNAS complex locus -0.0155349
RPL19 ribosomal protein L19 -0.0154289
ATP5F1B ATP synthase F1 subunit beta -0.015324
RPL11 ribosomal protein L11 -0.0151313
RPL27A ribosomal protein L27a -0.015073
UBA6 ubiquitin-like modifier activating enzyme 6 -0.0149767
RPS13 ribosomal protein S13 -0.0149241
YBX1 Y box binding protein 1 -0.0149064
PDIA3 protein disulfide isomerase family A, member 3 -0.0148213
DHX9 DEAH (Asp-Glu-Ala-His) box helicase 9 -0.014659
PTP4A2 protein tyrosine phosphatase type IVA, member 2 -0.0145306