Encorafenib_NCI-H661 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Encorafenib perturbation in NCI-H661 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Encorafenib_NCI-H661 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
CTNNA2 catenin (cadherin-associated protein), alpha 2 0.153045
PCLO piccolo presynaptic cytomatrix protein 0.0923384
PARD3B par-3 family cell polarity regulator beta 0.0900811
TENM3 teneurin transmembrane protein 3 0.0899637
NTM neurotrimin 0.0876056
HDAC9 histone deacetylase 9 0.0872366
ANK2 ankyrin 2, neuronal 0.0814594
FOXP2 forkhead box P2 0.0806158
CADM2 cell adhesion molecule 2 0.0755474
GPC3 glypican 3 0.074437
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0741169
PLEKHG1 pleckstrin homology domain containing, family G (with RhoGef domain) member 1 0.0695183
DST dystonin 0.0693736
CDH19 cadherin 19, type 2 0.0685057
HCN1 hyperpolarization activated cyclic nucleotide gated potassium channel 1 0.0677872
CDH10 cadherin 10, type 2 (T2-cadherin) 0.0677087
CDH6 cadherin 6, type 2, K-cadherin (fetal kidney) 0.0662148
SLIT2 slit homolog 2 (Drosophila) 0.0650072
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0598672
SMYD3 SET and MYND domain containing 3 0.0565696
HS3ST5 heparan sulfate (glucosamine) 3-O-sulfotransferase 5 0.0502644
RALGAPA1 Ral GTPase activating protein, alpha subunit 1 (catalytic) 0.0497025
PEG10 paternally expressed 10 0.048822
ERBB4 erb-b2 receptor tyrosine kinase 4 0.0486018
GALNTL6 polypeptide N-acetylgalactosaminyltransferase-like 6 0.047887
NPAS3 neuronal PAS domain protein 3 0.0475222
UTRN utrophin 0.0474726
ANKRD33B ankyrin repeat domain 33B 0.0473814
METAP2 methionyl aminopeptidase 2 0.0471988
COL5A2 collagen, type V, alpha 2 0.0468619
ADGRV1 adhesion G protein-coupled receptor V1 0.0455747
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) 0.0423545
TRPS1 trichorhinophalangeal syndrome I 0.041709
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0414122
MEIS2 Meis homeobox 2 0.0409033
RAD51B RAD51 paralog B 0.040163
GLI3 GLI family zinc finger 3 0.0395757
DNAH14 dynein, axonemal, heavy chain 14 0.0390229
TOX thymocyte selection-associated high mobility group box 0.0385445
SOX5 SRY (sex determining region Y)-box 5 0.0382474
SYT1 synaptotagmin I 0.037955
FAM171B family with sequence similarity 171, member B 0.036775
INTS6 integrator complex subunit 6 0.0367176
RABGAP1L RAB GTPase activating protein 1-like 0.0366124
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.0357966
HMGA2 high mobility group AT-hook 2 0.0351995
GULP1 GULP, engulfment adaptor PTB domain containing 1 0.0347381
ADGRB3 adhesion G protein-coupled receptor B3 0.0347281
SHROOM3 shroom family member 3 0.0338693
TARS1 threonyl-tRNA synthetase 1 0.033749
RAPGEF2 Rap guanine nucleotide exchange factor (GEF) 2 0.0331165
NHSL1 NHS-like 1 0.0327774
FNDC3B fibronectin type III domain containing 3B 0.0321272
MBD5 methyl-CpG binding domain protein 5 0.0320552
ZFAND3 zinc finger, AN1-type domain 3 0.0315629
USH2A Usher syndrome 2A (autosomal recessive, mild) 0.0311361
RIMS2 regulating synaptic membrane exocytosis 2 0.0307941
ARID1B AT rich interactive domain 1B (SWI1-like) 0.0303004
ARB2A ARB2 cotranscriptional regulator A 0.0286967
RASAL2 RAS protein activator like 2 0.0285173
APP amyloid beta (A4) precursor protein 0.0282221
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0282041
ADGRL2 adhesion G protein-coupled receptor L2 0.0281723
BMPR1A bone morphogenetic protein receptor, type IA 0.0281714
PLCB4 phospholipase C, beta 4 0.0272874
MED13L mediator complex subunit 13-like 0.0271476
ATXN1 ataxin 1 0.0268953
PDE4D phosphodiesterase 4D, cAMP-specific 0.0264106
MED12L mediator complex subunit 12-like 0.026283
UBR3 ubiquitin protein ligase E3 component n-recognin 3 (putative) 0.0262192
OSBPL10 oxysterol binding protein-like 10 0.0255182
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) 0.0252589
CSMD3 CUB and Sushi multiple domains 3 0.0251863
MACROD2 MACRO domain containing 2 0.0250658
SATB2 SATB homeobox 2 0.0249039
BCAS3 breast carcinoma amplified sequence 3 0.0243909
SMG7 SMG7 nonsense mediated mRNA decay factor 0.0242784
ZEB2 zinc finger E-box binding homeobox 2 0.0242573
NSMCE2 non-SMC element 2, MMS21 homolog (S. cerevisiae) 0.0241955
SIPA1L1 signal-induced proliferation-associated 1 like 1 0.0239108
HEATR5A HEAT repeat containing 5A 0.0238181
NEBL nebulette 0.0236984
NCOA2 nuclear receptor coactivator 2 0.0236097
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 0.0233675
ZNF385D zinc finger protein 385D 0.0233461
RUNX1T1 runt-related transcription factor 1; translocated to, 1 (cyclin D-related) 0.0233144
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.023183
MAML2 mastermind-like 2 (Drosophila) 0.0231637
IARS1 isoleucyl-tRNA synthetase 1 0.02309
TENM2 teneurin transmembrane protein 2 0.0229519
AARS1 alanyl-tRNA synthetase 1 0.0229086
NBEA neurobeachin 0.0227688
EXOC4 exocyst complex component 4 0.0227551
WDR70 WD repeat domain 70 0.022415
CDC42BPA CDC42 binding protein kinase alpha (DMPK-like) 0.0221237
SIK3 SIK family kinase 3 0.0217757
SGCG sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein) 0.0216
FAF1 Fas (TNFRSF6) associated factor 1 0.0215552
PRTG protogenin 0.021449
PHF14 PHD finger protein 14 0.0212213

decreased expression

Symbol Name Standardized Value
VIM vimentin -0.194525
TMSB10 thymosin beta 10 -0.19363
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.119259
PTMA prothymosin, alpha -0.117043
RPS6 ribosomal protein S6 -0.105952
PHIP pleckstrin homology domain interacting protein -0.079716
RPS16 ribosomal protein S16 -0.0748079
MDK midkine (neurite growth-promoting factor 2) -0.0696409
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0638455
RPL35A ribosomal protein L35a -0.0631083
WSB1 WD repeat and SOCS box containing 1 -0.0618947
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0618056
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0608951
RPS8 ribosomal protein S8 -0.0575273
GNAS GNAS complex locus -0.0557376
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0556508
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats -0.0555773
RPL11 ribosomal protein L11 -0.0523195
COL1A2 collagen, type I, alpha 2 -0.0509397
RAI1 retinoic acid induced 1 -0.0502161
RPS19 ribosomal protein S19 -0.0497844
PFN1 profilin 1 -0.0481732
B2M beta-2-microglobulin -0.0477426
RPL23 ribosomal protein L23 -0.046807
TPT1 tumor protein, translationally-controlled 1 -0.046642
CTNNA3 catenin (cadherin-associated protein), alpha 3 -0.0455931
ATP5F1B ATP synthase F1 subunit beta -0.0453809
NACA nascent polypeptide-associated complex alpha subunit -0.044501
PPDPF pancreatic progenitor cell differentiation and proliferation factor -0.0432683
ITGAV integrin, alpha V -0.0423616
MRPS30 mitochondrial ribosomal protein S30 -0.0423046
H3-3B H3.3 histone B -0.0419573
RPLP0 ribosomal protein, large, P0 -0.0417932
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0406544
RPL12 ribosomal protein L12 -0.0399591
PSMA7 proteasome (prosome, macropain) subunit, alpha type, 7 -0.0392772
ISG15 ISG15 ubiquitin-like modifier -0.0392021
BACH2 BTB and CNC homology 1, basic leucine zipper transcription factor 2 -0.0390486
MYL12B myosin, light chain 12B, regulatory -0.0390089
RTN4 reticulon 4 -0.0389591
HSPB1 heat shock 27kDa protein 1 -0.0385337
CBX3 chromobox homolog 3 -0.0382668
TSC22D2 TSC22 domain family, member 2 -0.0369291
RPL9 ribosomal protein L9 -0.0362926
TMSB4X thymosin beta 4, X-linked -0.0362828
RPL15 ribosomal protein L15 -0.0362209
ACTG1 actin gamma 1 -0.0359719
PGK1 phosphoglycerate kinase 1 -0.0359218
RPLP2 ribosomal protein, large, P2 -0.035501
RPS25 ribosomal protein S25 -0.0351632
RPL19 ribosomal protein L19 -0.0348285
SERBP1 SERPINE1 mRNA binding protein 1 -0.0344633
BAZ2A bromodomain adjacent to zinc finger domain, 2A -0.0343571
RPLP1 ribosomal protein, large, P1 -0.0337924
FST follistatin -0.0337293
SERF2 small EDRK-rich factor 2 -0.0336341
THOC2 THO complex 2 -0.0335567
KPNB1 karyopherin (importin) beta 1 -0.0333088
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0333075
RPL5 ribosomal protein L5 -0.0331989
CALR calreticulin -0.0329356
SFRP4 secreted frizzled-related protein 4 -0.0328113
SETD5 SET domain containing 5 -0.0327411
RPS27A ribosomal protein S27a -0.0326079
EMP1 epithelial membrane protein 1 -0.0325105
S100A9 S100 calcium binding protein A9 -0.0322972
NAP1L1 nucleosome assembly protein 1-like 1 -0.032239
POTEF POTE ankyrin domain family, member F -0.0322231
NRG1 neuregulin 1 -0.0321458
ENO1 enolase 1, (alpha) -0.0316277
YES1 YES proto-oncogene 1, Src family tyrosine kinase -0.0315201
LOC112694756 uncharaterized LOC112694756 -0.0313769
CAMTA1 calmodulin binding transcription activator 1 -0.0306314
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0302762
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0302346
CNRIP1 cannabinoid receptor interacting protein 1 -0.0302127
CCN2 cellular communication network factor 2 -0.0294313
RPL8 ribosomal protein L8 -0.0293142
RPS24 ribosomal protein S24 -0.0291192
RBM25 RNA binding motif protein 25 -0.0289798
YBX1 Y box binding protein 1 -0.0288303
DEK DEK proto-oncogene -0.0286862
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0283801
PPP1R12A protein phosphatase 1, regulatory subunit 12A -0.0279065
RPL34 ribosomal protein L34 -0.027745
RPL18 ribosomal protein L18 -0.0276621
FTL ferritin, light polypeptide -0.0274577
FBL fibrillarin -0.0268598
RPL26 ribosomal protein L26 -0.0267952
RPL30 ribosomal protein L30 -0.0266587
THBS1 thrombospondin 1 -0.026585
HMGB1 high mobility group box 1 -0.02654
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0265082
ZC3H15 zinc finger CCCH-type containing 15 -0.0263095
KTN1 kinectin 1 (kinesin receptor) -0.0262054
MRPS6 mitochondrial ribosomal protein S6 -0.0260627
MT2A metallothionein 2A -0.0256882
NDUFV2 NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa -0.0256636
RPL36A ribosomal protein L36a -0.0256361
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0254659