Entecavir (monohydrate)_RKO Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Entecavir (monohydrate) perturbation in RKO cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Entecavir (monohydrate)_RKO drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
RPL35A ribosomal protein L35a 0.0660962
USP3 ubiquitin specific peptidase 3 0.0606067
MT2A metallothionein 2A 0.0584634
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0525288
TMBIM6 transmembrane BAX inhibitor motif containing 6 0.0494655
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.0485383
BIRC6 baculoviral IAP repeat containing 6 0.0474882
ZNF292 zinc finger protein 292 0.0447817
LOC112694756 uncharaterized LOC112694756 0.0440289
MKLN1 muskelin 1, intracellular mediator containing kelch motifs 0.0428383
DIAPH3 diaphanous-related formin 3 0.0407396
IARS1 isoleucyl-tRNA synthetase 1 0.0386626
PSME4 proteasome (prosome, macropain) activator subunit 4 0.0385991
PCBP2 poly(rC) binding protein 2 0.0375338
PHIP pleckstrin homology domain interacting protein 0.0374172
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 0.0373578
EIF1 eukaryotic translation initiation factor 1 0.037001
RPL23 ribosomal protein L23 0.0363945
ATP13A3 ATPase type 13A3 0.0363769
S100A2 S100 calcium binding protein A2 0.0363285
RBM25 RNA binding motif protein 25 0.0360646
HMGA1 high mobility group AT-hook 1 0.0360164
BLZF1 basic leucine zipper nuclear factor 1 0.036004
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0358157
UBE2D3 ubiquitin-conjugating enzyme E2D 3 0.0355386
RPLP1 ribosomal protein, large, P1 0.0347502
BHLHE40 basic helix-loop-helix family, member e40 0.0346042
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0341384
PTK2 protein tyrosine kinase 2 0.0337814
RB1CC1 RB1-inducible coiled-coil 1 0.0327037
CNOT2 CCR4-NOT transcription complex, subunit 2 0.0320398
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 0.0309714
ELL2 elongation factor, RNA polymerase II, 2 0.0309437
RAB7A RAB7A, member RAS oncogene family 0.0304199
MIS18BP1 MIS18 binding protein 1 0.0299759
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b 0.0299618
HLA-A major histocompatibility complex, class I, A 0.0295905
RLF rearranged L-myc fusion 0.0295773
RPL36 ribosomal protein L36 0.0294115
ZFAND3 zinc finger, AN1-type domain 3 0.0288168
TMSB10 thymosin beta 10 0.0288063
NAMPT nicotinamide phosphoribosyltransferase 0.0286953
PTBP2 polypyrimidine tract binding protein 2 0.0284539
NIPBL Nipped-B homolog (Drosophila) 0.028369
MTF2 metal response element binding transcription factor 2 0.0283535
NUP58 nucleoporin 58 0.0283212
B2M beta-2-microglobulin 0.028276
RPL30 ribosomal protein L30 0.0282482
PSMD14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 0.0281588
RPLP0 ribosomal protein, large, P0 0.0279196
TIMP1 TIMP metallopeptidase inhibitor 1 0.0279195
CCNL1 cyclin L1 0.0268352
DHX15 DEAH (Asp-Glu-Ala-His) box helicase 15 0.0266555
ROCK1 Rho-associated, coiled-coil containing protein kinase 1 0.026634
PARD3 par-3 family cell polarity regulator 0.0266018
POU2F1 POU class 2 homeobox 1 0.0265271
SREK1 splicing regulatory glutamine/lysine-rich protein 1 0.0261066
WSB1 WD repeat and SOCS box containing 1 0.0259907
TXNRD1 thioredoxin reductase 1 0.0258826
FOXO3 forkhead box O3 0.025866
KIF20B kinesin family member 20B 0.0257866
PCNX1 pecanex 1 0.0255452
TMEM87A transmembrane protein 87A 0.0253399
TPI1 triosephosphate isomerase 1 0.0252264
SMC4 structural maintenance of chromosomes 4 0.0252192
PAN3 PAN3 poly(A) specific ribonuclease subunit 0.0250829
OLA1 Obg-like ATPase 1 0.0249838
RBM39 RNA binding motif protein 39 0.0249173
FXR1 fragile X mental retardation, autosomal homolog 1 0.0248912
HNRNPD heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) 0.0248502
NPEPPS aminopeptidase puromycin sensitive 0.0248457
RPS21 ribosomal protein S21 0.0247086
RNF145 ring finger protein 145 0.0244405
MYL12B myosin, light chain 12B, regulatory 0.0243219
MED13 mediator complex subunit 13 0.0243213
ECT2 epithelial cell transforming 2 0.0242367
UQCRB ubiquinol-cytochrome c reductase binding protein 0.0242082
TSC22D2 TSC22 domain family, member 2 0.0241533
TRA2A transformer 2 alpha homolog (Drosophila) 0.023964
RPL13A ribosomal protein L13a 0.0238042
CDC73 cell division cycle 73 0.0237926
NOP58 NOP58 ribonucleoprotein 0.0236231
WDR43 WD repeat domain 43 0.0235937
RRAS2 related RAS viral (r-ras) oncogene homolog 2 0.0235278
RHOA ras homolog family member A 0.0233329
RPS4X ribosomal protein S4, X-linked 0.0232702
RSRC2 arginine/serine-rich coiled-coil 2 0.0232416
EWSR1 EWS RNA-binding protein 1 0.0228165
EGLN1 egl-9 family hypoxia-inducible factor 1 0.022779
LAMB3 laminin, beta 3 0.0225148
PFN1 profilin 1 0.0224689
RNF168 ring finger protein 168, E3 ubiquitin protein ligase 0.0224616
EIF3E eukaryotic translation initiation factor 3, subunit E 0.0222788
RAP1B RAP1B, member of RAS oncogene family 0.0222586
GAPVD1 GTPase activating protein and VPS9 domains 1 0.0221802
FANCI Fanconi anemia, complementation group I 0.0221652
DEK DEK proto-oncogene 0.0220764
RTN4 reticulon 4 0.0220281
EPB41L2 erythrocyte membrane protein band 4.1-like 2 0.0219493
AP3B1 adaptor-related protein complex 3, beta 1 subunit 0.021908

decreased expression

Symbol Name Standardized Value
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.144831
FRMD6 FERM domain containing 6 -0.130153
ARHGAP22 Rho GTPase activating protein 22 -0.100413
ZNF438 zinc finger protein 438 -0.0980266
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0864797
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0855292
FRMD4A FERM domain containing 4A -0.0788786
RPS2 ribosomal protein S2 -0.0755514
NABP1 nucleic acid binding protein 1 -0.0717734
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0713542
HMGA2 high mobility group AT-hook 2 -0.0700208
EXT1 exostosin glycosyltransferase 1 -0.0659766
SLC38A2 solute carrier family 38, member 2 -0.0651672
AKAP12 A kinase (PRKA) anchor protein 12 -0.0636206
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0620786
DLC1 DLC1 Rho GTPase activating protein -0.0617276
RPL7 ribosomal protein L7 -0.0554238
MTAP methylthioadenosine phosphorylase -0.0539133
AHNAK AHNAK nucleoprotein -0.0511447
SET SET nuclear proto-oncogene -0.0493969
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.0488153
SAMD4A sterile alpha motif domain containing 4A -0.0486741
STC1 stanniocalcin 1 -0.048632
RPL3 ribosomal protein L3 -0.0467969
EFNB2 ephrin-B2 -0.0448654
CLTC clathrin, heavy chain (Hc) -0.0445218
TTR transthyretin -0.0436468
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0434549
TM4SF1 transmembrane 4 L six family member 1 -0.0422322
ASPH aspartate beta-hydroxylase -0.0417521
HDAC9 histone deacetylase 9 -0.0413705
NAV3 neuron navigator 3 -0.0410592
MACF1 microtubule-actin crosslinking factor 1 -0.0387449
HSPA8 heat shock 70kDa protein 8 -0.0385142
CAPRIN2 caprin family member 2 -0.0378491
CANX calnexin -0.0372068
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0368513
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 -0.0355688
SPTAN1 spectrin, alpha, non-erythrocytic 1 -0.0349081
PAPOLA poly(A) polymerase alpha -0.0342679
WNT2B wingless-type MMTV integration site family, member 2B -0.0335919
SP100 SP100 nuclear antigen -0.0333963
TPM4 tropomyosin 4 -0.0330091
GFPT2 glutamine-fructose-6-phosphate transaminase 2 -0.0327561
INTS6 integrator complex subunit 6 -0.0326439
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0321899
EEF2 eukaryotic translation elongation factor 2 -0.0320494
ANKIB1 ankyrin repeat and IBR domain containing 1 -0.0318049
NAV2 neuron navigator 2 -0.0315853
TPM3 tropomyosin 3 -0.031502
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.031056
GOLGB1 golgin B1 -0.0310319
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 -0.0305411
HSPA9 heat shock 70kDa protein 9 (mortalin) -0.0304103
MAPKAP1 mitogen-activated protein kinase associated protein 1 -0.0303069
CUX1 cut-like homeobox 1 -0.0290506
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0289579
RPS18 ribosomal protein S18 -0.0288915
PHC2 polyhomeotic homolog 2 (Drosophila) -0.0287151
RPL7A ribosomal protein L7a -0.0285781
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 -0.0285646
TAS2R14 taste receptor, type 2, member 14 -0.0281576
PCNX4 pecanex 4 -0.028086
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 -0.0279218
PDE4D phosphodiesterase 4D, cAMP-specific -0.0278141
TASOR2 transcription activation suppressor family member 2 -0.0277751
PTMA prothymosin, alpha -0.0272149
PGK1 phosphoglycerate kinase 1 -0.0272041
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 -0.027157
BPTF bromodomain PHD finger transcription factor -0.0271103
MYH9 myosin, heavy chain 9, non-muscle -0.026889
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0267649
UBC ubiquitin C -0.0259744
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 -0.0256556
EIF3A eukaryotic translation initiation factor 3, subunit A -0.0253908
RPL4 ribosomal protein L4 -0.0250396
FLNB filamin B, beta -0.0250301
WNK1 WNK lysine deficient protein kinase 1 -0.0249926
TAOK1 TAO kinase 1 -0.0247472
PDIA6 protein disulfide isomerase family A, member 6 -0.0244845
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0243995
SETX senataxin -0.0242623
TRIM44 tripartite motif containing 44 -0.0242037
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.024113
DST dystonin -0.0238518
STK4 serine/threonine kinase 4 -0.02382
ZNF706 zinc finger protein 706 -0.0235427
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 -0.023541
SGMS2 sphingomyelin synthase 2 -0.0234522
RPL17-C18ORF32 RPL17-C18orf32 readthrough -0.0234201
ALCAM activated leukocyte cell adhesion molecule -0.0231216
ACTR2 ARP2 actin-related protein 2 homolog (yeast) -0.0231116
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0230512
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa -0.0225294
ASAP2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 -0.0223096
AEBP2 AE binding protein 2 -0.0222678
DSG2 desmoglein 2 -0.0221363
PRKCE protein kinase C, epsilon -0.0218545
PTPRG protein tyrosine phosphatase, receptor type, G -0.0218124
ATM ATM serine/threonine kinase -0.0217621