Entrectinib_CHP-212 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Entrectinib perturbation in CHP-212 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Entrectinib_CHP-212 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
IGF2 insulin-like growth factor 2 0.188309
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.12903
AKAP12 A kinase (PRKA) anchor protein 12 0.105795
VIM vimentin 0.105151
PTPRD protein tyrosine phosphatase, receptor type, D 0.060985
COL1A1 collagen, type I, alpha 1 0.0555743
MAP1B microtubule-associated protein 1B 0.0508854
FTH1 ferritin, heavy polypeptide 1 0.0452025
GULP1 GULP, engulfment adaptor PTB domain containing 1 0.0420187
RPL35A ribosomal protein L35a 0.0389433
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0310427
VCL vinculin 0.0306222
ZBTB20 zinc finger and BTB domain containing 20 0.0298823
H1-0 H1.0 linker histone 0.0288904
FTL ferritin, light polypeptide 0.0286113
RPL34 ribosomal protein L34 0.0273053
SEPTIN9 septin 9 0.0272163
TPT1 tumor protein, translationally-controlled 1 0.0266949
PDE3A phosphodiesterase 3A, cGMP-inhibited 0.0264268
RPL32 ribosomal protein L32 0.0263887
KPNB1 karyopherin (importin) beta 1 0.0259356
MEF2A myocyte enhancer factor 2A 0.0257572
LIMCH1 LIM and calponin homology domains 1 0.0251235
RPL17-C18ORF32 RPL17-C18orf32 readthrough 0.0250592
RPS27A ribosomal protein S27a 0.0245993
FN1 fibronectin 1 0.0245272
PTPRK protein tyrosine phosphatase, receptor type, K 0.0238162
RPS6 ribosomal protein S6 0.0227842
SREBF2 sterol regulatory element binding transcription factor 2 0.0223254
EIF1 eukaryotic translation initiation factor 1 0.0219764
RPL19 ribosomal protein L19 0.0218634
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) 0.0211595
ATRNL1 attractin-like 1 0.0209556
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0208181
EIF4A1 eukaryotic translation initiation factor 4A1 0.0208062
NDRG1 N-myc downstream regulated 1 0.020351
PPIA peptidylprolyl isomerase A (cyclophilin A) 0.0203409
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0203357
EGR1 early growth response 1 0.0198408
PLAT plasminogen activator, tissue 0.0196443
LGR5 leucine-rich repeat containing G protein-coupled receptor 5 0.0193032
CSDE1 cold shock domain containing E1, RNA-binding 0.0192099
RPS3 ribosomal protein S3 0.0187475
ZMIZ1 zinc finger, MIZ-type containing 1 0.0184904
SIK2 salt-inducible kinase 2 0.0182565
NME2 NME/NM23 nucleoside diphosphate kinase 2 0.0182356
TOMM20 translocase of outer mitochondrial membrane 20 homolog (yeast) 0.0182183
GOLGB1 golgin B1 0.0181263
SLC6A6 solute carrier family 6 (neurotransmitter transporter), member 6 0.018031
GLCCI1 glucocorticoid induced 1 0.0178996
BICD1 bicaudal D homolog 1 (Drosophila) 0.0176326
RAD51B RAD51 paralog B 0.0174829
ZSWIM6 zinc finger, SWIM-type containing 6 0.0171957
RBMS3 RNA binding motif, single stranded interacting protein 3 0.0170924
ZFP36L1 ZFP36 ring finger protein-like 1 0.0170917
CD46 CD46 molecule, complement regulatory protein 0.0169371
RPS20 ribosomal protein S20 0.0166694
RAB7A RAB7A, member RAS oncogene family 0.0166209
LSAMP limbic system-associated membrane protein 0.0164978
TNFRSF19 tumor necrosis factor receptor superfamily, member 19 0.0164253
SRRM2 serine/arginine repetitive matrix 2 0.0163195
AKT3 v-akt murine thymoma viral oncogene homolog 3 0.0162071
RSL1D1 ribosomal L1 domain containing 1 0.0160813
PSD3 pleckstrin and Sec7 domain containing 3 0.015944
RPL35 ribosomal protein L35 0.0158261
SLC6A4 solute carrier family 6 (neurotransmitter transporter), member 4 0.0157152
RPS14 ribosomal protein S14 0.0156921
CRH corticotropin releasing hormone 0.015582
COL3A1 collagen, type III, alpha 1 0.0151736
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 0.0151201
PTMA prothymosin, alpha 0.0151191
MON2 MON2 homolog (S. cerevisiae) 0.0148127
B3GALT1 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1 0.0147924
RPL36 ribosomal protein L36 0.0147034
RPL13A ribosomal protein L13a 0.014343
ATP6V1G1 ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1 0.0143348
CALU calumenin 0.0141313
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0139434
LGALS3BP lectin, galactoside-binding, soluble, 3 binding protein 0.0139359
CADM2 cell adhesion molecule 2 0.0138494
PCBP3 poly(rC) binding protein 3 0.0136834
EEF2 eukaryotic translation elongation factor 2 0.0136336
GPC5 glypican 5 0.0134171
GDF15 growth differentiation factor 15 0.0134142
DLC1 DLC1 Rho GTPase activating protein 0.0132912
RPL37 ribosomal protein L37 0.0130141
NCOR2 nuclear receptor corepressor 2 0.012989
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0129662
NACA nascent polypeptide-associated complex alpha subunit 0.0127223
SOX9 SRY (sex determining region Y)-box 9 0.0127222
RPL27 ribosomal protein L27 0.0126712
ZFP36 ZFP36 ring finger protein 0.012592
GNPDA1 glucosamine-6-phosphate deaminase 1 0.0124948
ATP2B4 ATPase, Ca++ transporting, plasma membrane 4 0.0124161
PFN1 profilin 1 0.0123041
TOB1 transducer of ERBB2, 1 0.0122386
RBFOX2 RNA binding protein, fox-1 homolog (C. elegans) 2 0.012234
TGFB1 transforming growth factor, beta 1 0.0120884
RPL37A ribosomal protein L37a 0.0119635
GAB2 GRB2-associated binding protein 2 0.0119136

decreased expression

Symbol Name Standardized Value
DDX1 DEAD (Asp-Glu-Ala-Asp) box helicase 1 -0.34029
TRIO trio Rho guanine nucleotide exchange factor -0.052247
LUC7L3 LUC7-like 3 (S. cerevisiae) -0.0517448
NAMPT nicotinamide phosphoribosyltransferase -0.0475702
HELZ helicase with zinc finger -0.0376526
NALF1 NALCN channel auxiliary factor 1 -0.0367807
LPIN1 lipin 1 -0.0351982
ZC3H11A zinc finger CCCH-type containing 11A -0.0328951
ITPRID2 ITPR interacting domain containing 2 -0.032408
FAM13A family with sequence similarity 13, member A -0.0316913
SMYD3 SET and MYND domain containing 3 -0.0309004
FNDC3B fibronectin type III domain containing 3B -0.0306625
DHX9 DEAH (Asp-Glu-Ala-His) box helicase 9 -0.0304277
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0298668
SPAG9 sperm associated antigen 9 -0.0287652
ZMYM2 zinc finger, MYM-type 2 -0.0287019
KMT2C lysine (K)-specific methyltransferase 2C -0.02767
CDH10 cadherin 10, type 2 (T2-cadherin) -0.0273809
THSD4 thrombospondin, type I, domain containing 4 -0.0271931
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.0270492
AOPEP aminopeptidase O (putative) -0.026342
SOS1 son of sevenless homolog 1 (Drosophila) -0.0250596
MBNL2 muscleblind-like splicing regulator 2 -0.0247473
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.024261
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0239969
KMT2E lysine (K)-specific methyltransferase 2E -0.0238427
PTK2 protein tyrosine kinase 2 -0.0235008
PKM pyruvate kinase, muscle -0.0234038
NPEPPS aminopeptidase puromycin sensitive -0.0232206
ADGRG6 adhesion G protein-coupled receptor G6 -0.0228346
NIPBL Nipped-B homolog (Drosophila) -0.0226947
RNF213 ring finger protein 213 -0.022552
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0225475
ZNF207 zinc finger protein 207 -0.021689
ITCH itchy E3 ubiquitin protein ligase -0.0214964
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0211948
XPO1 exportin 1 -0.020601
KDM4C lysine (K)-specific demethylase 4C -0.0205679
ANKRD28 ankyrin repeat domain 28 -0.020499
PCBP2 poly(rC) binding protein 2 -0.0204168
PCDH9 protocadherin 9 -0.0202893
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 -0.0202765
PCNX1 pecanex 1 -0.0200541
JMJD1C jumonji domain containing 1C -0.02003
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0200082
SUCO SUN domain containing ossification factor -0.0197874
MYH10 myosin, heavy chain 10, non-muscle -0.019656
NPAS2 neuronal PAS domain protein 2 -0.0194841
FNDC3A fibronectin type III domain containing 3A -0.0193262
DNMBP dynamin binding protein -0.0189762
CNOT1 CCR4-NOT transcription complex, subunit 1 -0.0187327
NEK7 NIMA-related kinase 7 -0.0184834
AKAP13 A kinase (PRKA) anchor protein 13 -0.0184718
FXR1 fragile X mental retardation, autosomal homolog 1 -0.0184279
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0181987
SPTBN1 spectrin, beta, non-erythrocytic 1 -0.0181891
PRPF40A PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae) -0.0180882
PSMD14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 -0.01807
NF1 neurofibromin 1 -0.0180572
SEPTIN7 septin 7 -0.0178819
UBA2 ubiquitin-like modifier activating enzyme 2 -0.0176954
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A -0.0176783
TLK2 tousled-like kinase 2 -0.0175759
WDFY3 WD repeat and FYVE domain containing 3 -0.017557
PHF21A PHD finger protein 21A -0.0175238
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 -0.0173949
PDIA3 protein disulfide isomerase family A, member 3 -0.0173811
DST dystonin -0.0173135
ZFAND3 zinc finger, AN1-type domain 3 -0.0172878
ENAH enabled homolog (Drosophila) -0.0169914
CENPE centromere protein E, 312kDa -0.0169613
PEAK1 pseudopodium-enriched atypical kinase 1 -0.0169459
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0169286
DSCAM Down syndrome cell adhesion molecule -0.016926
WAC WW domain containing adaptor with coiled-coil -0.0169231
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0168958
BBX bobby sox homolog (Drosophila) -0.0168634
NBAS neuroblastoma amplified sequence -0.0168385
ANO6 anoctamin 6 -0.0167323
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0165631
MBNL1 muscleblind-like splicing regulator 1 -0.0165233
SRP54 signal recognition particle 54kDa -0.0165055
GATAD2B GATA zinc finger domain containing 2B -0.0163988
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0162479
PDS5B PDS5 cohesin associated factor B -0.0162007
DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3 -0.0161276
TENT4A terminal nucleotidyltransferase 4A -0.0161143
OGA O-GlcNAcase -0.0160178
ZC3H15 zinc finger CCCH-type containing 15 -0.0159538
GIGYF2 GRB10 interacting GYF protein 2 -0.0159065
PARD3 par-3 family cell polarity regulator -0.0158863
ROCK1 Rho-associated, coiled-coil containing protein kinase 1 -0.0156625
PDE8A phosphodiesterase 8A -0.0155209
ERC1 ELKS/RAB6-interacting/CAST family member 1 -0.0155157
RIGI RNA sensor RIG-I -0.0154575
SCAF11 SR-related CTD-associated factor 11 -0.0154549
MED13 mediator complex subunit 13 -0.0153428
NKTR natural killer cell triggering receptor -0.0153228
SCARB2 scavenger receptor class B, member 2 -0.0153027
TRA2B transformer 2 beta homolog (Drosophila) -0.0152482