Entrectinib_HS-578T Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Entrectinib perturbation in HS-578T cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Entrectinib_HS-578T drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FN1 fibronectin 1 0.179628
COL6A3 collagen, type VI, alpha 3 0.0903068
MYH9 myosin, heavy chain 9, non-muscle 0.0476695
CD44 CD44 molecule (Indian blood group) 0.0424869
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0412529
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.035697
COL1A1 collagen, type I, alpha 1 0.0356105
TRIO trio Rho guanine nucleotide exchange factor 0.0329802
STC1 stanniocalcin 1 0.0310935
MICAL2 microtubule associated monooxygenase, calponin and LIM domain containing 2 0.0292009
FTH1 ferritin, heavy polypeptide 1 0.0282212
NKAIN3 Na+/K+ transporting ATPase interacting 3 0.0278185
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.0265999
CDH13 cadherin 13 0.0255177
COL5A1 collagen, type V, alpha 1 0.0254519
PSD3 pleckstrin and Sec7 domain containing 3 0.0228399
HMGA2 high mobility group AT-hook 2 0.0222545
EXT1 exostosin glycosyltransferase 1 0.0214629
MTSS1 metastasis suppressor 1 0.0202778
FBN1 fibrillin 1 0.019805
ECE1 endothelin converting enzyme 1 0.0182674
DPYSL3 dihydropyrimidinase-like 3 0.0171389
LOXL2 lysyl oxidase-like 2 0.0170708
FAT1 FAT atypical cadherin 1 0.0170123
KLF7 Kruppel-like factor 7 (ubiquitous) 0.0167824
ERRFI1 ERBB receptor feedback inhibitor 1 0.0166945
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 0.0166472
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.016473
ST3GAL1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 0.0161713
WWTR1 WW domain containing transcription regulator 1 0.0159594
SMAD3 SMAD family member 3 0.0158327
VCAN versican 0.0158269
MAP1B microtubule-associated protein 1B 0.0155194
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0151565
GLIS3 GLIS family zinc finger 3 0.0148808
H1-0 H1.0 linker histone 0.0146696
PALM2AKAP2 PALM2 and AKAP2 fusion 0.0145803
NAV1 neuron navigator 1 0.0145375
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0145105
CLIC4 chloride intracellular channel 4 0.0144735
PRELID2 PRELI domain containing 2 0.0139933
BHLHE40 basic helix-loop-helix family, member e40 0.01398
DOCK5 dedicator of cytokinesis 5 0.0134639
HAS2 hyaluronan synthase 2 0.0133801
EFNA5 ephrin-A5 0.0133389
PLEC plectin 0.0132532
VCL vinculin 0.0127439
RUNX1 runt-related transcription factor 1 0.0126334
ZBTB38 zinc finger and BTB domain containing 38 0.0126156
ELL2 elongation factor, RNA polymerase II, 2 0.012582
PDLIM5 PDZ and LIM domain 5 0.0121891
NAV2 neuron navigator 2 0.012168
ABLIM3 actin binding LIM protein family, member 3 0.012096
ATXN1 ataxin 1 0.0120316
DST dystonin 0.0118633
RASA2 RAS p21 protein activator 2 0.0116577
LHFPL2 lipoma HMGIC fusion partner-like 2 0.0112466
LTBP1 latent transforming growth factor beta binding protein 1 0.0111873
AHNAK AHNAK nucleoprotein 0.0110635
SLC22A23 solute carrier family 22, member 23 0.0108636
DSPP dentin sialophosphoprotein 0.0105035
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 0.0102116
ADAM12 ADAM metallopeptidase domain 12 0.0101788
ADAM19 ADAM metallopeptidase domain 19 0.0100586
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 0.00987023
EIF4H eukaryotic translation initiation factor 4H 0.00975448
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 0.00967985
MSN moesin 0.00966722
ZEB2 zinc finger E-box binding homeobox 2 0.0093609
NRIP1 nuclear receptor interacting protein 1 0.00922827
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.00904804
KIAA1217 KIAA1217 0.00895735
SH3PXD2B SH3 and PX domains 2B 0.008909
SIPA1L3 signal-induced proliferation-associated 1 like 3 0.00887517
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.00858623
VEGFC vascular endothelial growth factor C 0.00841795
RASA3 RAS p21 protein activator 3 0.00839512
COL7A1 collagen, type VII, alpha 1 0.00833841
FER fer (fps/fes related) tyrosine kinase 0.00833118
MYO10 myosin X 0.00830017
GFPT2 glutamine-fructose-6-phosphate transaminase 2 0.00827162
PPIA peptidylprolyl isomerase A (cyclophilin A) 0.00812342
PTPN1 protein tyrosine phosphatase, non-receptor type 1 0.00808226
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.00785323
FAM20C family with sequence similarity 20, member C 0.00776582
NT5E 5'-nucleotidase, ecto (CD73) 0.00775716
HSPA8 heat shock 70kDa protein 8 0.00773385
SEPTIN9 septin 9 0.00762616
RARB retinoic acid receptor, beta 0.00760007
ITGA5 integrin, alpha 5 (fibronectin receptor, alpha polypeptide) 0.0075783
MKI67 marker of proliferation Ki-67 0.00749453
RFX8 RFX family member 8, lacking RFX DNA binding domain 0.00746674
YEATS2 YEATS domain containing 2 0.00744669
FBXL7 F-box and leucine-rich repeat protein 7 0.00736798
IGFBP7 insulin-like growth factor binding protein 7 0.00724794
LOX lysyl oxidase 0.00723054
PHC2 polyhomeotic homolog 2 (Drosophila) 0.00721537
RAI14 retinoic acid induced 14 0.00717548
TNS1 tensin 1 0.00715956
OSMR oncostatin M receptor 0.00715281

decreased expression

Symbol Name Standardized Value
NDRG1 N-myc downstream regulated 1 -0.141856
VIM vimentin -0.129649
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.0925978
TMSB10 thymosin beta 10 -0.0878574
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0770733
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.075113
COL1A2 collagen, type I, alpha 2 -0.0651918
TIMP3 TIMP metallopeptidase inhibitor 3 -0.0619581
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0617059
RPS8 ribosomal protein S8 -0.0553716
FTL ferritin, light polypeptide -0.0535952
PTMA prothymosin, alpha -0.05316
MT2A metallothionein 2A -0.0498691
RPS6 ribosomal protein S6 -0.0488724
RPL35A ribosomal protein L35a -0.0463341
CADM1 cell adhesion molecule 1 -0.0436737
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0419219
ENO1 enolase 1, (alpha) -0.0399638
LDHA lactate dehydrogenase A -0.0396308
TMEM158 transmembrane protein 158 (gene/pseudogene) -0.0364325
CALR calreticulin -0.0364205
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0357235
S100A9 S100 calcium binding protein A9 -0.0344155
ACTG1 actin gamma 1 -0.0327551
IER3 immediate early response 3 -0.0319903
RPL23 ribosomal protein L23 -0.0300451
EIF1 eukaryotic translation initiation factor 1 -0.0300436
PKM pyruvate kinase, muscle -0.0295494
MTDH metadherin -0.0281025
TPT1 tumor protein, translationally-controlled 1 -0.027419
RPLP1 ribosomal protein, large, P1 -0.0271595
IGFBP3 insulin-like growth factor binding protein 3 -0.0270499
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0268642
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0267809
WSB1 WD repeat and SOCS box containing 1 -0.0265882
RPL11 ribosomal protein L11 -0.0265604
GARS1 glycyl-tRNA synthetase 1 -0.0256994
S100A6 S100 calcium binding protein A6 -0.0250386
UBC ubiquitin C -0.0249668
RPL37A ribosomal protein L37a -0.0244177
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0241898
DSTN destrin (actin depolymerizing factor) -0.0239425
RPL5 ribosomal protein L5 -0.0237162
RPS19 ribosomal protein S19 -0.0236769
RPL28 ribosomal protein L28 -0.0231777
RPL26 ribosomal protein L26 -0.0230989
GOLGA4 golgin A4 -0.0230032
CANX calnexin -0.0227781
RPS3 ribosomal protein S3 -0.0225621
LGALS1 lectin, galactoside-binding, soluble, 1 -0.0224413
B2M beta-2-microglobulin -0.0222585
SEPTIN7 septin 7 -0.0219449
NAMPT nicotinamide phosphoribosyltransferase -0.0214375
RPL8 ribosomal protein L8 -0.0212822
RPL19 ribosomal protein L19 -0.0211081
LMAN1 lectin, mannose-binding, 1 -0.020842
HILPDA hypoxia inducible lipid droplet-associated -0.0207846
RPL30 ribosomal protein L30 -0.0206919
RACK1 receptor for activated C kinase 1 -0.0206546
LIMS1 LIM and senescent cell antigen-like domains 1 -0.0205706
CYB5R3 cytochrome b5 reductase 3 -0.0204152
RPLP0 ribosomal protein, large, P0 -0.0201617
RPLP2 ribosomal protein, large, P2 -0.0201127
RPS13 ribosomal protein S13 -0.0200363
HSPA9 heat shock 70kDa protein 9 (mortalin) -0.0199722
RPL34 ribosomal protein L34 -0.0197973
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.0197199
RPS25 ribosomal protein S25 -0.0193695
S100A10 S100 calcium binding protein A10 -0.0192322
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.019232
HLA-B major histocompatibility complex, class I, B -0.0191989
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0190982
RPS12 ribosomal protein S12 -0.0188964
RPS11 ribosomal protein S11 -0.0187529
FAM162A family with sequence similarity 162, member A -0.0187267
TPM2 tropomyosin 2 (beta) -0.0186986
SLC39A14 solute carrier family 39 (zinc transporter), member 14 -0.0186723
TGFBI transforming growth factor, beta-induced, 68kDa -0.0186137
UQCRB ubiquinol-cytochrome c reductase binding protein -0.018576
KCTD9 potassium channel tetramerization domain containing 9 -0.0184828
USP3 ubiquitin specific peptidase 3 -0.0182132
RPL12 ribosomal protein L12 -0.0180186
TRAM1 translocation associated membrane protein 1 -0.0178953
RAB1A RAB1A, member RAS oncogene family -0.0176631
VDAC1 voltage-dependent anion channel 1 -0.0176327
EEF2 eukaryotic translation elongation factor 2 -0.0176236
RPS24 ribosomal protein S24 -0.0173543
RPL9 ribosomal protein L9 -0.017284
SPDYA speedy/RINGO cell cycle regulator family member A -0.0172815
GNAS GNAS complex locus -0.0172229
SPOCK1 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 -0.0171232
ENO2 enolase 2 (gamma, neuronal) -0.0169545
RPL36 ribosomal protein L36 -0.0169254
ZFAND3 zinc finger, AN1-type domain 3 -0.0164164
F3 coagulation factor III (thromboplastin, tissue factor) -0.016326
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0160802
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0159238
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.0158791
RPL31 ribosomal protein L31 -0.0158386
KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 -0.015807