Entrectinib_HepG2/C3A Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Entrectinib perturbation in HepG2/C3A cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Entrectinib_HepG2/C3A drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
IGF2 insulin-like growth factor 2 0.367413
SERPINA1 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 0.0966439
C3 complement component 3 0.0946566
IGFBP1 insulin-like growth factor binding protein 1 0.0815505
ERRFI1 ERBB receptor feedback inhibitor 1 0.0521533
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0372364
RPL3 ribosomal protein L3 0.0296534
FTH1 ferritin, heavy polypeptide 1 0.0282511
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0268336
ZFP36 ZFP36 ring finger protein 0.0268249
DNAJB1 DnaJ (Hsp40) homolog, subfamily B, member 1 0.025098
TNS1 tensin 1 0.0243709
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0242655
GLS2 glutaminase 2 (liver, mitochondrial) 0.0239381
LRRTM4 leucine rich repeat transmembrane neuronal 4 0.0238388
RSRC2 arginine/serine-rich coiled-coil 2 0.0230416
TNFAIP3 tumor necrosis factor, alpha-induced protein 3 0.0223021
SVIL supervillin 0.0221754
GPAM glycerol-3-phosphate acyltransferase, mitochondrial 0.0217853
BHLHE40 basic helix-loop-helix family, member e40 0.0216379
TCIM transcriptional and immune response regulator 0.0209047
ID2 inhibitor of DNA binding 2, dominant negative helix-loop-helix protein 0.0202693
MARCHF3 membrane associated ring-CH-type finger 3 0.0193842
RTN4 reticulon 4 0.0192795
ZFP36L2 ZFP36 ring finger protein-like 2 0.0182741
VEGFA vascular endothelial growth factor A 0.0182028
FNIP1 folliculin interacting protein 1 0.0178711
DIP2B DIP2 disco-interacting protein 2 homolog B (Drosophila) 0.0176434
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0172218
EGR1 early growth response 1 0.0172113
CENPF centromere protein F, 350/400kDa 0.0163725
PHLDB2 pleckstrin homology-like domain, family B, member 2 0.0162584
BCL2L1 BCL2-like 1 0.0162021
TOP1 topoisomerase (DNA) I 0.01612
ICAM1 intercellular adhesion molecule 1 0.0159476
MKI67 marker of proliferation Ki-67 0.01592
ORM1 orosomucoid 1 0.0155556
RHOB ras homolog family member B 0.0150422
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.014841
VCAN versican 0.0147385
CRY1 cryptochrome circadian clock 1 0.014657
SYNE1 spectrin repeat containing, nuclear envelope 1 0.0144046
NDRG1 N-myc downstream regulated 1 0.0143768
PTP4A1 protein tyrosine phosphatase type IVA, member 1 0.0142914
SLC20A1 solute carrier family 20 (phosphate transporter), member 1 0.0139718
DSPP dentin sialophosphoprotein 0.0128348
RNASEH2A ribonuclease H2, subunit A 0.0123638
LMO7 LIM domain 7 0.0123155
SYF2 SYF2 pre-mRNA-splicing factor 0.0122984
ZFP36L1 ZFP36 ring finger protein-like 1 0.0122838
HSPH1 heat shock 105kDa/110kDa protein 1 0.0121693
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 0.0117027
PLXDC2 plexin domain containing 2 0.011642
STK38L serine/threonine kinase 38 like 0.01151
PAPOLA poly(A) polymerase alpha 0.0113845
RBBP6 retinoblastoma binding protein 6 0.0113438
SLC2A13 solute carrier family 2 (facilitated glucose transporter), member 13 0.0111561
ITGAV integrin, alpha V 0.0110826
IFNGR1 interferon gamma receptor 1 0.0109393
PRRC2A proline-rich coiled-coil 2A 0.0107428
STK35 serine/threonine kinase 35 0.0106721
FAF2 Fas associated factor family member 2 0.0106371
NUB1 negative regulator of ubiquitin-like proteins 1 0.0106327
KIF13B kinesin family member 13B 0.0105988
RALGAPA2 Ral GTPase activating protein, alpha subunit 2 (catalytic) 0.0104812
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0104664
DOCK5 dedicator of cytokinesis 5 0.0104566
SLC1A2 solute carrier family 1 (glial high affinity glutamate transporter), member 2 0.0104534
ANXA5 annexin A5 0.0103143
LOC102724023 ES1 protein homolog, mitochondrial 0.0102449
SERPINB9 serpin peptidase inhibitor, clade B (ovalbumin), member 9 0.0102336
SPATS2L spermatogenesis associated, serine-rich 2-like 0.0101325
MCFD2 multiple coagulation factor deficiency 2 0.0101133
DHRS2 dehydrogenase/reductase (SDR family) member 2 0.00998296
AGFG1 ArfGAP with FG repeats 1 0.00997481
NSFL1C NSFL1 (p97) cofactor (p47) 0.00990816
ADGRD1 adhesion G protein-coupled receptor D1 0.00977642
A1CF APOBEC1 complementation factor 0.00969915
IL1RAP interleukin 1 receptor accessory protein 0.00967718
EPC2 enhancer of polycomb homolog 2 (Drosophila) 0.00966934
NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta 0.00963597
CTNND1 catenin (cadherin-associated protein), delta 1 0.00942943
KYNU kynureninase 0.00940177
CEBPD CCAAT/enhancer binding protein (C/EBP), delta 0.00935081
CRLS1 cardiolipin synthase 1 0.00930287
PCK1 phosphoenolpyruvate carboxykinase 1 (soluble) 0.00925178
FRK fyn-related Src family tyrosine kinase 0.00923473
MTX2 metaxin 2 0.00923001
SKIL SKI-like proto-oncogene 0.00909778
NSMAF neutral sphingomyelinase (N-SMase) activation associated factor 0.00906221
CLIC1 chloride intracellular channel 1 0.00903972
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma 0.00897982
FZD5 frizzled class receptor 5 0.00896306
PRXL2A peroxiredoxin like 2A 0.00892214
FAXDC2 fatty acid hydroxylase domain containing 2 0.00878268
PRPF38B pre-mRNA processing factor 38B 0.0087673
PRELID2 PRELI domain containing 2 0.00868614
IL17RB interleukin 17 receptor B 0.00868344
ASAH1 N-acylsphingosine amidohydrolase (acid ceramidase) 1 0.008683
SRSF3 serine/arginine-rich splicing factor 3 0.00867804

decreased expression

Symbol Name Standardized Value
FBF1 Fas (TNFRSF6) binding factor 1 -0.15342
MT2A metallothionein 2A -0.108348
GPC3 glypican 3 -0.0955537
RERE arginine-glutamic acid dipeptide (RE) repeats -0.0851138
EHBP1 EH domain binding protein 1 -0.0825522
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) -0.0822418
GPC6 glypican 6 -0.0815678
ENO1 enolase 1, (alpha) -0.0799586
AHSG alpha-2-HS-glycoprotein -0.0757105
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0755753
ELL2 elongation factor, RNA polymerase II, 2 -0.075229
FNDC3B fibronectin type III domain containing 3B -0.0742856
LRMDA leucine rich melanocyte differentiation associated -0.0692007
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) -0.0688984
ZFAND3 zinc finger, AN1-type domain 3 -0.0681034
GNAS GNAS complex locus -0.0627709
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.062668
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0611989
EML4 echinoderm microtubule associated protein like 4 -0.060742
ZMYND8 zinc finger, MYND-type containing 8 -0.0596005
TMEM123 transmembrane protein 123 -0.0589999
RBM39 RNA binding motif protein 39 -0.0578586
PTPRM protein tyrosine phosphatase, receptor type, M -0.0571901
MAML2 mastermind-like 2 (Drosophila) -0.0545809
GMDS GDP-mannose 4,6-dehydratase -0.0538494
TRIO trio Rho guanine nucleotide exchange factor -0.0513589
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0513326
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0512074
SESTD1 SEC14 and spectrin domains 1 -0.0507537
TF transferrin -0.0496651
ZBTB20 zinc finger and BTB domain containing 20 -0.0490209
AKAP12 A kinase (PRKA) anchor protein 12 -0.0488282
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0470438
RPS24 ribosomal protein S24 -0.046839
APOE apolipoprotein E -0.0454264
TRIM26 tripartite motif containing 26 -0.0445944
BIRC6 baculoviral IAP repeat containing 6 -0.0445827
RPS6 ribosomal protein S6 -0.0440156
PEG3 paternally expressed 3 -0.0434025
RPL5 ribosomal protein L5 -0.0420563
KDM3A lysine (K)-specific demethylase 3A -0.0418299
TPT1 tumor protein, translationally-controlled 1 -0.0415116
NPAS2 neuronal PAS domain protein 2 -0.041419
ANKRD11 ankyrin repeat domain 11 -0.0407571
PDLIM5 PDZ and LIM domain 5 -0.0392962
RPS8 ribosomal protein S8 -0.0392062
PARD3 par-3 family cell polarity regulator -0.0391459
IGF1R insulin-like growth factor 1 receptor -0.0390221
FARP1 FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived) -0.0387536
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 -0.0379991
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.037959
UBE2D2 ubiquitin-conjugating enzyme E2D 2 -0.0378332
TM4SF1 transmembrane 4 L six family member 1 -0.0376761
TMSB10 thymosin beta 10 -0.0374042
RPL23 ribosomal protein L23 -0.0364143
PTTG1IP pituitary tumor-transforming 1 interacting protein -0.0363161
ITGA1 integrin, alpha 1 -0.0360953
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0359151
TIMP1 TIMP metallopeptidase inhibitor 1 -0.0358001
WDR45B WD repeat domain 45B -0.0355443
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0354693
FRMD5 FERM domain containing 5 -0.0348112
SERPINA3 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 -0.0341507
FAM135A family with sequence similarity 135, member A -0.0335117
NKD1 naked cuticle homolog 1 (Drosophila) -0.032503
LYZ lysozyme -0.032486
LDHA lactate dehydrogenase A -0.0321182
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.031822
MSI2 musashi RNA-binding protein 2 -0.0317615
RPL35A ribosomal protein L35a -0.0316801
AMBP alpha-1-microglobulin/bikunin precursor -0.0316711
CANX calnexin -0.031559
FN1 fibronectin 1 -0.031091
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) -0.0310492
TNRC6B trinucleotide repeat containing 6B -0.0308156
GK glycerol kinase -0.0305101
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 -0.0301278
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0298251
RPL37A ribosomal protein L37a -0.0294744
CP ceruloplasmin (ferroxidase) -0.0294005
PDIA3 protein disulfide isomerase family A, member 3 -0.0291979
USP34 ubiquitin specific peptidase 34 -0.0291094
SLC38A1 solute carrier family 38, member 1 -0.0290849
PPP2R5E protein phosphatase 2, regulatory subunit B', epsilon isoform -0.0289487
RPLP1 ribosomal protein, large, P1 -0.0288639
FTL ferritin, light polypeptide -0.0284316
FMNL2 formin-like 2 -0.0282089
PGK1 phosphoglycerate kinase 1 -0.0281801
CCNY cyclin Y -0.0281149
ACSL4 acyl-CoA synthetase long-chain family member 4 -0.0279126
RNF213 ring finger protein 213 -0.0278919
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 -0.0278815
SDC4 syndecan 4 -0.0278447
DST dystonin -0.0276814
HELZ helicase with zinc finger -0.0276665
NHSL1 NHS-like 1 -0.0275796
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0273233
KMT2C lysine (K)-specific methyltransferase 2C -0.0272815
EIF3A eukaryotic translation initiation factor 3, subunit A -0.027256
GNAQ guanine nucleotide binding protein (G protein), q polypeptide -0.0272232