Entrectinib_NCI-H2122 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Entrectinib perturbation in NCI-H2122 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Entrectinib_NCI-H2122 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
TRIO trio Rho guanine nucleotide exchange factor 0.0907168
FMN1 formin 1 0.065911
PGK1 phosphoglycerate kinase 1 0.0594161
MYH9 myosin, heavy chain 9, non-muscle 0.058725
COPA coatomer protein complex, subunit alpha 0.0553703
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0543943
EXT1 exostosin glycosyltransferase 1 0.0525947
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0506289
NFIB nuclear factor I/B 0.0479259
NPEPPS aminopeptidase puromycin sensitive 0.047802
ESYT2 extended synaptotagmin-like protein 2 0.0473502
EPS8 epidermal growth factor receptor pathway substrate 8 0.0403866
TNKS tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 0.0392169
RBM39 RNA binding motif protein 39 0.0370653
PUM2 pumilio RNA-binding family member 2 0.0370622
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0361696
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0360593
PDPK1 3-phosphoinositide dependent protein kinase 1 0.0356961
ENAH enabled homolog (Drosophila) 0.0354581
RHEB Ras homolog enriched in brain 0.0349814
PRELID2 PRELI domain containing 2 0.0348161
GLG1 golgi glycoprotein 1 0.0336794
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0333918
ROCK1 Rho-associated, coiled-coil containing protein kinase 1 0.0333193
PALLD palladin, cytoskeletal associated protein 0.0325563
CTBP2 C-terminal binding protein 2 0.0319162
NAMPT nicotinamide phosphoribosyltransferase 0.0314737
RAB18 RAB18, member RAS oncogene family 0.0311356
LOC112694756 uncharaterized LOC112694756 0.0305953
WDR45B WD repeat domain 45B 0.0305754
ZNF292 zinc finger protein 292 0.0305222
FUS FUS RNA binding protein 0.0302529
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 0.0301566
RASAL2 RAS protein activator like 2 0.0300777
ITCH itchy E3 ubiquitin protein ligase 0.0299684
ANKRD17 ankyrin repeat domain 17 0.0295503
AP1G1 adaptor-related protein complex 1, gamma 1 subunit 0.0295078
ROCK2 Rho-associated, coiled-coil containing protein kinase 2 0.0290376
DSCAM Down syndrome cell adhesion molecule 0.0288718
CD44 CD44 molecule (Indian blood group) 0.0284809
ZFC3H1 zinc finger, C3H1-type containing 0.0277643
RAP1B RAP1B, member of RAS oncogene family 0.027525
PALM2AKAP2 PALM2 and AKAP2 fusion 0.0272737
PPP3R1 protein phosphatase 3, regulatory subunit B, alpha 0.0271588
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme 0.0271318
LRRFIP2 leucine rich repeat (in FLII) interacting protein 2 0.0271081
MBNL2 muscleblind-like splicing regulator 2 0.0270937
HMGA2 high mobility group AT-hook 2 0.0269319
ATP13A3 ATPase type 13A3 0.0268607
STRN3 striatin, calmodulin binding protein 3 0.0267855
ZNF148 zinc finger protein 148 0.0267684
SEC31A SEC31 homolog A (S. cerevisiae) 0.026389
TLN1 talin 1 0.0263885
KMT2C lysine (K)-specific methyltransferase 2C 0.0262302
ABI1 abl-interactor 1 0.0261607
HELZ helicase with zinc finger 0.0259352
CTTN cortactin 0.0256491
SQSTM1 sequestosome 1 0.0255835
TRPC4AP transient receptor potential cation channel, subfamily C, member 4 associated protein 0.0255795
RYBP RING1 and YY1 binding protein 0.0254946
MEIS2 Meis homeobox 2 0.0254019
WDFY1 WD repeat and FYVE domain containing 1 0.0253134
FNDC3B fibronectin type III domain containing 3B 0.0249993
TTC3 tetratricopeptide repeat domain 3 0.0249677
MORF4L2 mortality factor 4 like 2 0.0249422
FRMD4A FERM domain containing 4A 0.024914
FUT8 fucosyltransferase 8 (alpha (1,6) fucosyltransferase) 0.0248621
GOLGA4 golgin A4 0.0246231
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 0.0245605
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0245405
PJA2 praja ring finger 2, E3 ubiquitin protein ligase 0.0243949
PDE8A phosphodiesterase 8A 0.0241904
TNPO3 transportin 3 0.0241063
FBXO34 F-box protein 34 0.0237379
GLS2 glutaminase 2 (liver, mitochondrial) 0.0236769
MAP4K3 mitogen-activated protein kinase kinase kinase kinase 3 0.0235161
ECPAS Ecm29 proteasome adaptor and scaffold 0.0234416
SUCO SUN domain containing ossification factor 0.0232541
QKI QKI, KH domain containing, RNA binding 0.0231831
POGZ pogo transposable element with ZNF domain 0.0231307
PAN3 PAN3 poly(A) specific ribonuclease subunit 0.022884
AFF4 AF4/FMR2 family, member 4 0.0227806
CSDE1 cold shock domain containing E1, RNA-binding 0.0227603
CLU clusterin 0.0226527
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0225698
ANKRD11 ankyrin repeat domain 11 0.0224836
MBOAT2 membrane bound O-acyltransferase domain containing 2 0.0224779
MCL1 myeloid cell leukemia 1 0.0224575
MTDH metadherin 0.0223131
GARS1 glycyl-tRNA synthetase 1 0.0222716
CDC73 cell division cycle 73 0.0221835
NUMB numb homolog (Drosophila) 0.0219377
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0218764
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0218482
RAD51B RAD51 paralog B 0.0217299
ARID4B AT rich interactive domain 4B (RBP1-like) 0.0217123
COG5 component of oligomeric golgi complex 5 0.0214654
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0214585
XPO1 exportin 1 0.0213677
USP3 ubiquitin specific peptidase 3 0.0213591

decreased expression

Symbol Name Standardized Value
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0758618
FTL ferritin, light polypeptide -0.0683
MYO1E myosin IE -0.0654586
TMSB10 thymosin beta 10 -0.0645104
KRT17 keratin 17, type I -0.0600546
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0585222
VIM vimentin -0.0571721
MUC16 mucin 16, cell surface associated -0.0571239
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0504157
STAT6 signal transducer and activator of transcription 6, interleukin-4 induced -0.050082
RPS8 ribosomal protein S8 -0.049166
RPL35A ribosomal protein L35a -0.0483313
ACTG1 actin gamma 1 -0.0482523
LAMB3 laminin, beta 3 -0.048168
RPLP0 ribosomal protein, large, P0 -0.0479222
RPS16 ribosomal protein S16 -0.0465634
BACE2 beta-site APP-cleaving enzyme 2 -0.0459721
POTEF POTE ankyrin domain family, member F -0.0441631
RPL26 ribosomal protein L26 -0.0440004
SVIL supervillin -0.0438924
TJP1 tight junction protein 1 -0.0426408
ERBIN erbb2 interacting protein -0.0424768
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0414712
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0411607
ATOSA atos homolog A -0.0408443
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0408059
TM4SF1 transmembrane 4 L six family member 1 -0.0407601
ASPH aspartate beta-hydroxylase -0.0405236
TPT1 tumor protein, translationally-controlled 1 -0.0398088
S100A6 S100 calcium binding protein A6 -0.0395641
B2M beta-2-microglobulin -0.0387232
RPS6 ribosomal protein S6 -0.0383592
USP34 ubiquitin specific peptidase 34 -0.0382369
LMO7 LIM domain 7 -0.0380229
S100A9 S100 calcium binding protein A9 -0.0378206
RPLP2 ribosomal protein, large, P2 -0.0375585
CAPN2 calpain 2, (m/II) large subunit -0.0371581
ANXA2 annexin A2 -0.0367466
DSPP dentin sialophosphoprotein -0.0360389
PTMA prothymosin, alpha -0.0359937
CEACAM5 carcinoembryonic antigen-related cell adhesion molecule 5 -0.0356498
CEMIP cell migration inducing protein, hyaluronan binding -0.0352575
RPL23 ribosomal protein L23 -0.0348971
IGFBP3 insulin-like growth factor binding protein 3 -0.0343357
EIF1 eukaryotic translation initiation factor 1 -0.0342401
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0342121
LAMC2 laminin, gamma 2 -0.0337531
PKM pyruvate kinase, muscle -0.0329052
DOCK4 dedicator of cytokinesis 4 -0.0327519
RPS17 ribosomal protein S17 -0.0322318
EFNA5 ephrin-A5 -0.0321521
RPL19 ribosomal protein L19 -0.0319483
TPM4 tropomyosin 4 -0.0313534
DLG1 discs, large homolog 1 (Drosophila) -0.0312221
SIPA1L3 signal-induced proliferation-associated 1 like 3 -0.031218
SAMD4A sterile alpha motif domain containing 4A -0.0304378
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.030274
GRB10 growth factor receptor-bound protein 10 -0.0302715
UBC ubiquitin C -0.0301977
ATP2C2 ATPase, Ca++ transporting, type 2C, member 2 -0.0299666
RPL31 ribosomal protein L31 -0.0293617
RPL15 ribosomal protein L15 -0.0291033
ERC2 ELKS/RAB6-interacting/CAST family member 2 -0.0287595
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa -0.0285021
GNAS GNAS complex locus -0.0284495
PTPRM protein tyrosine phosphatase, receptor type, M -0.0282085
RPL36 ribosomal protein L36 -0.0277416
RPL34 ribosomal protein L34 -0.0273684
RPL28 ribosomal protein L28 -0.0271114
RPS27A ribosomal protein S27a -0.0266959
RPS24 ribosomal protein S24 -0.0266701
WASF2 WAS protein family, member 2 -0.0264349
RPS12 ribosomal protein S12 -0.0263961
RACK1 receptor for activated C kinase 1 -0.0263214
CD2AP CD2-associated protein -0.025898
RPS23 ribosomal protein S23 -0.0258649
RPS25 ribosomal protein S25 -0.0258574
CSTB cystatin B (stefin B) -0.0251563
MBD5 methyl-CpG binding domain protein 5 -0.0249626
RPS11 ribosomal protein S11 -0.0249254
RPL37A ribosomal protein L37a -0.0244764
BPTF bromodomain PHD finger transcription factor -0.0244297
F3 coagulation factor III (thromboplastin, tissue factor) -0.0243454
KYNU kynureninase -0.0242793
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0235073
RRBP1 ribosome binding protein 1 -0.0233989
PARD3 par-3 family cell polarity regulator -0.0229839
TXNRD1 thioredoxin reductase 1 -0.0228165
MXD1 MAX dimerization protein 1 -0.0227109
ABHD17C abhydrolase domain containing 17C -0.0226951
RPS3 ribosomal protein S3 -0.0225717
RPL37 ribosomal protein L37 -0.0215638
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0211381
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 -0.0207413
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.0206593
RPS19 ribosomal protein S19 -0.0206357
BCAR3 breast cancer anti-estrogen resistance 3 -0.0206355
RAB10 RAB10, member RAS oncogene family -0.0205712
PDE4D phosphodiesterase 4D, cAMP-specific -0.0205413
C6ORF132 chromosome 6 open reading frame 132 -0.0203502