Entrectinib_NCI-H2347 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Entrectinib perturbation in NCI-H2347 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Entrectinib_NCI-H2347 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FN1 fibronectin 1 0.127993
POTEF POTE ankyrin domain family, member F 0.118899
LPP LIM domain containing preferred translocation partner in lipoma 0.106623
TMSB10 thymosin beta 10 0.0799853
EXT1 exostosin glycosyltransferase 1 0.0729095
KRT7 keratin 7, type II 0.0583392
FBXO32 F-box protein 32 0.0542588
MYH9 myosin, heavy chain 9, non-muscle 0.0511219
LAMC2 laminin, gamma 2 0.0499317
CCND1 cyclin D1 0.0470181
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0469705
LIMCH1 LIM and calponin homology domains 1 0.0455177
TPM4 tropomyosin 4 0.0397642
HLA-B major histocompatibility complex, class I, B 0.0385338
PDLIM5 PDZ and LIM domain 5 0.0374579
ERBIN erbb2 interacting protein 0.0371706
SOX4 SRY (sex determining region Y)-box 4 0.0370872
TPM3 tropomyosin 3 0.0365807
TM4SF1 transmembrane 4 L six family member 1 0.0356459
VEGFA vascular endothelial growth factor A 0.0351888
HLA-A major histocompatibility complex, class I, A 0.0349434
IFI27 interferon, alpha-inducible protein 27 0.0349246
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.034375
MCU mitochondrial calcium uniporter 0.0337411
PRRC2C proline-rich coiled-coil 2C 0.0337
RBM25 RNA binding motif protein 25 0.0335141
VCL vinculin 0.0332056
PTMA prothymosin, alpha 0.0329359
LAMB3 laminin, beta 3 0.0328905
ARHGAP20 Rho GTPase activating protein 20 0.0322124
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0318769
ENO2 enolase 2 (gamma, neuronal) 0.0317764
ZSWIM6 zinc finger, SWIM-type containing 6 0.0316811
TMSB4X thymosin beta 4, X-linked 0.0311804
AKAP13 A kinase (PRKA) anchor protein 13 0.0303672
MAP1B microtubule-associated protein 1B 0.0297901
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.0296814
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0292439
FNIP1 folliculin interacting protein 1 0.0289731
CAPN2 calpain 2, (m/II) large subunit 0.0283655
RCOR1 REST corepressor 1 0.0282949
MYO1E myosin IE 0.0279862
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 0.0276755
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0273741
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.0263152
KRT8 keratin 8, type II 0.0259714
IFI6 interferon, alpha-inducible protein 6 0.0259417
FLNA filamin A, alpha 0.0253013
EIF4H eukaryotic translation initiation factor 4H 0.024633
NF1 neurofibromin 1 0.0244338
SMURF1 SMAD specific E3 ubiquitin protein ligase 1 0.0243846
LMNA lamin A/C 0.0243677
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0241612
SFTPA2 surfactant protein A2 0.0238322
TRIO trio Rho guanine nucleotide exchange factor 0.0238228
CSNK1A1 casein kinase 1, alpha 1 0.0236932
CSDE1 cold shock domain containing E1, RNA-binding 0.0234261
CLTC clathrin, heavy chain (Hc) 0.0233585
PGBD5 piggyBac transposable element derived 5 0.0232479
GPBP1 GC-rich promoter binding protein 1 0.0232354
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.0231255
TMEM165 transmembrane protein 165 0.0226371
TRIP12 thyroid hormone receptor interactor 12 0.0224578
UBE2H ubiquitin-conjugating enzyme E2H 0.022412
ZNF148 zinc finger protein 148 0.022066
CBFA2T2 core-binding factor, runt domain, alpha subunit 2; translocated to, 2 0.0220442
ARID4B AT rich interactive domain 4B (RBP1-like) 0.0218869
ETV6 ets variant 6 0.0217241
BHLHE40 basic helix-loop-helix family, member e40 0.0216726
PPIA peptidylprolyl isomerase A (cyclophilin A) 0.0216042
MACC1 metastasis associated in colon cancer 1 0.0214445
USP53 ubiquitin specific peptidase 53 0.0211931
ARHGAP5 Rho GTPase activating protein 5 0.0211319
ZBTB20 zinc finger and BTB domain containing 20 0.0210363
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 0.0207786
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0206383
KDM3A lysine (K)-specific demethylase 3A 0.0205906
SLC20A2 solute carrier family 20 (phosphate transporter), member 2 0.0205679
TMF1 TATA element modulatory factor 1 0.0205194
EPCAM epithelial cell adhesion molecule 0.0204571
EIF3H eukaryotic translation initiation factor 3, subunit H 0.0204391
TUFT1 tuftelin 1 0.0202849
FBXL20 F-box and leucine-rich repeat protein 20 0.0202171
SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 0.0202003
PPP6R3 protein phosphatase 6, regulatory subunit 3 0.0199806
PPP2R5E protein phosphatase 2, regulatory subunit B', epsilon isoform 0.0199207
PLEC plectin 0.0198767
FBXO34 F-box protein 34 0.0197951
AFF1 AF4/FMR2 family, member 1 0.0197777
COPA coatomer protein complex, subunit alpha 0.0196984
GOLM1 golgi membrane protein 1 0.0196151
GOLGA4 golgin A4 0.0195404
MDK midkine (neurite growth-promoting factor 2) 0.0194754
AP3B1 adaptor-related protein complex 3, beta 1 subunit 0.0194201
FNBP4 formin binding protein 4 0.0194201
ATP6V0E1 ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1 0.0193721
MICAL3 microtubule associated monooxygenase, calponin and LIM domain containing 3 0.0193221
HSPA8 heat shock 70kDa protein 8 0.0192445
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 0.019211
SRPK2 SRSF protein kinase 2 0.0190421

decreased expression

Symbol Name Standardized Value
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.231622
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.175274
NDRG1 N-myc downstream regulated 1 -0.171902
FTL ferritin, light polypeptide -0.128891
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0806285
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0739018
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0671907
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0616455
MT2A metallothionein 2A -0.0595837
HMGA1 high mobility group AT-hook 1 -0.0570781
TSC22D2 TSC22 domain family, member 2 -0.0461341
G0S2 G0/G1 switch 2 -0.0450348
ASPH aspartate beta-hydroxylase -0.0421448
TOP1 topoisomerase (DNA) I -0.0401039
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0391848
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa -0.0362605
FOSL1 FOS-like antigen 1 -0.0355787
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0355607
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0349567
RPLP0 ribosomal protein, large, P0 -0.0345073
IGFBP3 insulin-like growth factor binding protein 3 -0.0340232
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0329755
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0324547
ELL2 elongation factor, RNA polymerase II, 2 -0.0324367
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0319208
S100A10 S100 calcium binding protein A10 -0.030295
USP3 ubiquitin specific peptidase 3 -0.0298847
UBA6 ubiquitin-like modifier activating enzyme 6 -0.0289538
NAMPT nicotinamide phosphoribosyltransferase -0.0273148
RNF145 ring finger protein 145 -0.0269145
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0263778
FHIT fragile histidine triad -0.0261101
FAM162A family with sequence similarity 162, member A -0.0259331
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.0257858
RPS6 ribosomal protein S6 -0.0248723
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0244595
NAV2 neuron navigator 2 -0.0242638
S100A6 S100 calcium binding protein A6 -0.0241742
RPS27 ribosomal protein S27 -0.023404
RNF19A ring finger protein 19A, RBR E3 ubiquitin protein ligase -0.0233729
TNFRSF10D tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain -0.0233562
LDHA lactate dehydrogenase A -0.0233459
RPS8 ribosomal protein S8 -0.0225345
VDAC1 voltage-dependent anion channel 1 -0.0210786
CCNI cyclin I -0.0209853
CCNB1 cyclin B1 -0.0198522
RYBP RING1 and YY1 binding protein -0.0195173
SLC38A2 solute carrier family 38, member 2 -0.0193906
ANKRD28 ankyrin repeat domain 28 -0.0192149
SMC4 structural maintenance of chromosomes 4 -0.018926
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0188782
LMAN1 lectin, mannose-binding, 1 -0.0188277
KIAA1217 KIAA1217 -0.0188137
YBX1 Y box binding protein 1 -0.0186584
CENPE centromere protein E, 312kDa -0.0186362
RPLP1 ribosomal protein, large, P1 -0.0186105
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0184538
RPS19 ribosomal protein S19 -0.0184385
DUSP6 dual specificity phosphatase 6 -0.018431
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0184062
ARRDC3 arrestin domain containing 3 -0.0182398
FAM13A family with sequence similarity 13, member A -0.0182215
ENO1 enolase 1, (alpha) -0.0182154
EMP1 epithelial membrane protein 1 -0.0181614
CENPF centromere protein F, 350/400kDa -0.0180797
QKI QKI, KH domain containing, RNA binding -0.0177412
CHMP2B charged multivesicular body protein 2B -0.0176966
ANKRD37 ankyrin repeat domain 37 -0.0175921
CPNE3 copine III -0.0173914
ACTG1 actin gamma 1 -0.0173608
ECT2 epithelial cell transforming 2 -0.0173199
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0172938
PDIA6 protein disulfide isomerase family A, member 6 -0.0171697
COX7C cytochrome c oxidase subunit VIIc -0.0170827
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0169829
PDIA3 protein disulfide isomerase family A, member 3 -0.016741
SSBP2 single-stranded DNA binding protein 2 -0.0167317
TXNRD1 thioredoxin reductase 1 -0.0167231
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0167098
FXR1 fragile X mental retardation, autosomal homolog 1 -0.0167045
DDX60 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 -0.0166905
TACSTD2 tumor-associated calcium signal transducer 2 -0.0166824
HP1BP3 heterochromatin protein 1, binding protein 3 -0.0165485
ICAM1 intercellular adhesion molecule 1 -0.0164485
MKI67 marker of proliferation Ki-67 -0.0163315
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like -0.0161123
RPL21 ribosomal protein L21 -0.01576
EHF ets homologous factor -0.0155984
UBE2C ubiquitin-conjugating enzyme E2C -0.0155418
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 -0.0154541
RTN4 reticulon 4 -0.0153406
PCBP2 poly(rC) binding protein 2 -0.0151449
PHLDA2 pleckstrin homology-like domain, family A, member 2 -0.0151366
RPL19 ribosomal protein L19 -0.0151081
MRPS6 mitochondrial ribosomal protein S6 -0.0151063
NUP58 nucleoporin 58 -0.0150663
SQLE squalene epoxidase -0.014968
CKAP2 cytoskeleton associated protein 2 -0.0148476
AREG amphiregulin -0.0146254
ERC2 ELKS/RAB6-interacting/CAST family member 2 -0.0145766